RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 RBM12B-AS1Q9P1G2 102 aa6.12□□□□□ -1.43
GGA3-201ENST00000537686 LINC00472Q9H8W2 130 aa6.11□□□□□ -1.43
GGA3-201ENST00000537686 KRTAP10-2P60368 255 aa6.09□□□□□ -1.43
GGA3-201ENST00000537686 PANO1I0J062 215 aa6.09□□□□□ -1.43
GGA3-201ENST00000537686 HRES1P13985 223 aa6.09□□□□□ -1.43
GGA3-201ENST00000537686 KRTAP10-1P60331 282 aa6.09□□□□□ -1.44
GGA3-201ENST00000537686 Q8N9P0 234 aaPredicted RBP6.08□□□□□ -1.44
GGA3-201ENST00000537686 Q1T7F1 81 aa6.07□□□□□ -1.44
GGA3-201ENST00000537686 LINC01554Q52M75 96 aa6.07□□□□□ -1.44
GGA3-201ENST00000537686 Q6ZSA8 131 aa6.06□□□□□ -1.44
GGA3-201ENST00000537686 KRTAP4-16G5E9R7 235 aaPredicted RBP6.05□□□□□ -1.44
GGA3-201ENST00000537686 A0A0D9SG42 100 aa6.05□□□□□ -1.44
GGA3-201ENST00000537686 LCE6AA0A183 80 aa6.04□□□□□ -1.44
GGA3-201ENST00000537686 Q6ZR54 194 aa6.03□□□□□ -1.44
GGA3-201ENST00000537686 ZCCHC13Q8WW36 166 aaKnown RBP6.02□□□□□ -1.45
GGA3-201ENST00000537686 KTN1-AS1Q86SY8 53 aa6.01□□□□□ -1.45
GGA3-201ENST00000537686 SPINT4Q6UDR6 99 aa6.01□□□□□ -1.45
GGA3-201ENST00000537686 CRIPTQ9P021 101 aa6□□□□□ -1.45
GGA3-201ENST00000537686 Q5W150 140 aa6□□□□□ -1.45
GGA3-201ENST00000537686 CDC42SE1Q9NRR8 79 aa5.98□□□□□ -1.45
GGA3-201ENST00000537686 SPINK7P58062 85 aa5.97□□□□□ -1.45
GGA3-201ENST00000537686 Q5VSD8 79 aa5.96□□□□□ -1.45
GGA3-201ENST00000537686 TENM2Q9NT68 2774 aa5.95□□□□□ -1.46
GGA3-201ENST00000537686 A0A087X002 238 aa5.95□□□□□ -1.46
GGA3-201ENST00000537686 A0A1B0GU33 70 aa5.95□□□□□ -1.46
GGA3-201ENST00000537686 LINC00483Q53H64 154 aa5.95□□□□□ -1.46
GGA3-201ENST00000537686 KRTAP11-1Q8IUC1 163 aa5.94□□□□□ -1.46
GGA3-201ENST00000537686 KRTAP21-3Q3LHN1 58 aa5.94□□□□□ -1.46
GGA3-201ENST00000537686 Q6ZRN7 208 aaPredicted RBP5.94□□□□□ -1.46
GGA3-201ENST00000537686 TGP01266 2768 aa5.93□□□□□ -1.46
GGA3-201ENST00000537686 SRRM2Q9UQ35 2752 aaKnown RBP5.92□□□□□ -1.46
GGA3-201ENST00000537686 KRTAP7-1Q8IUC3 87 aa5.91□□□□□ -1.46
GGA3-201ENST00000537686 LINC01558Q9Y6Z2 57 aa5.91□□□□□ -1.46
GGA3-201ENST00000537686 Q75L30 129 aa5.89□□□□□ -1.47
GGA3-201ENST00000537686 KRTAP29-1A8MX34 341 aaPredicted RBP5.89□□□□□ -1.47
GGA3-201ENST00000537686 CSAG1Q6PB30 78 aa5.89□□□□□ -1.47
GGA3-201ENST00000537686 LCA10Q71F78 164 aa5.89□□□□□ -1.47
GGA3-201ENST00000537686 Q5VV11 94 aa5.88□□□□□ -1.47
GGA3-201ENST00000537686 M0R2T5 61 aa5.87□□□□□ -1.47
GGA3-201ENST00000537686 NOTCH2NLQ7Z3S9 236 aa5.86□□□□□ -1.47
GGA3-201ENST00000537686 CAMK2N1Q7Z7J9 78 aa5.85□□□□□ -1.47
GGA3-201ENST00000537686 SEC61BP60468 96 aaKnown RBP5.83□□□□□ -1.48
GGA3-201ENST00000537686 S4R3F8 94 aa5.83□□□□□ -1.48
GGA3-201ENST00000537686 DMAC1Q96GE9 116 aa5.81□□□□□ -1.48
GGA3-201ENST00000537686 KRTAP13-1Q8IUC0 172 aa5.78□□□□□ -1.48
GGA3-201ENST00000537686 FBN3Q75N90 2809 aa5.78□□□□□ -1.48
GGA3-201ENST00000537686 R4GN34 69 aa5.78□□□□□ -1.48
GGA3-201ENST00000537686 KRTAP13-2Q52LG2 175 aa5.76□□□□□ -1.49
GGA3-201ENST00000537686 ASB16-AS1Q495Z4 193 aa5.74□□□□□ -1.49
GGA3-201ENST00000537686 PRAC1Q96KF2 57 aa5.74□□□□□ -1.49
GGA3-201ENST00000537686 MEGF8Q7Z7M0 2845 aa5.69□□□□□ -1.5
GGA3-201ENST00000537686 RPL37P61927 97 aaKnown RBP5.68□□□□□ -1.5
GGA3-201ENST00000537686 RPS29P62273 56 aaKnown RBP5.67□□□□□ -1.5
GGA3-201ENST00000537686 M0QZ58 72 aa5.66□□□□□ -1.5
GGA3-201ENST00000537686 HUWE1Q7Z6Z7 4374 aaKnown RBP5.65□□□□□ -1.5
GGA3-201ENST00000537686 H1FX-AS1Q4G0G2 97 aa5.65□□□□□ -1.5
GGA3-201ENST00000537686 A6NN06 94 aa5.64□□□□□ -1.51
GGA3-201ENST00000537686 LUZP6Q538Z0 58 aa5.64□□□□□ -1.51
GGA3-201ENST00000537686 SPATA8Q6RVD6 105 aa5.64□□□□□ -1.51
GGA3-201ENST00000537686 A8MU10 97 aa5.63□□□□□ -1.51
GGA3-201ENST00000537686 ADM2Q7Z4H4 148 aa5.61□□□□□ -1.51
GGA3-201ENST00000537686 COL7A1Q02388 2944 aa5.6□□□□□ -1.51
GGA3-201ENST00000537686 DNAH1Q9P2D7 4330 aa5.57□□□□□ -1.52
GGA3-201ENST00000537686 H3BS24 57 aa5.57□□□□□ -1.52
GGA3-201ENST00000537686 ANK2Q01484 3957 aa5.57□□□□□ -1.52
GGA3-201ENST00000537686 DNAH9Q9NYC9 4486 aa5.55□□□□□ -1.52
GGA3-201ENST00000537686 ROMO1P60602 79 aa5.55□□□□□ -1.52
GGA3-201ENST00000537686 KRTAP1-4P0C5Y4 121 aa5.53□□□□□ -1.52
GGA3-201ENST00000537686 CMYA5Q8N3K9 4069 aa5.52□□□□□ -1.53
GGA3-201ENST00000537686 DNAH3Q8TD57 4116 aa5.51□□□□□ -1.53
GGA3-201ENST00000537686 DNHD1Q96M86 4753 aa5.51□□□□□ -1.53
GGA3-201ENST00000537686 A8MUU9 505 aa5.5□□□□□ -1.53
GGA3-201ENST00000537686 CSMD3Q7Z407 3707 aa5.48□□□□□ -1.53
GGA3-201ENST00000537686 C20orf166-AS1Q96NR2 134 aa5.48□□□□□ -1.53
GGA3-201ENST00000537686 PLAC4Q8WY50 150 aa5.44□□□□□ -1.54
GGA3-201ENST00000537686 DNAH10Q8IVF4 4471 aa5.44□□□□□ -1.54
GGA3-201ENST00000537686 PRKDCP78527 4128 aaKnown RBP5.42□□□□□ -1.54
GGA3-201ENST00000537686 PLECQ15149 4684 aaKnown RBP5.41□□□□□ -1.54
GGA3-201ENST00000537686 A0A1B0GVY2 172 aa5.4□□□□□ -1.55
GGA3-201ENST00000537686 XP32Q5T750 250 aa5.39□□□□□ -1.55
GGA3-201ENST00000537686 LYSTQ99698 3801 aa5.35□□□□□ -1.55
GGA3-201ENST00000537686 STARD9Q9P2P6 4700 aa5.33□□□□□ -1.56
GGA3-201ENST00000537686 KRTAP16-1A8MUX0 517 aa5.32□□□□□ -1.56
GGA3-201ENST00000537686 DYNC2H1Q8NCM8 4307 aaKnown RBP5.31□□□□□ -1.56
GGA3-201ENST00000537686 KRTAP25-1Q3LHN0 102 aa5.3□□□□□ -1.56
GGA3-201ENST00000537686 VPS13DQ5THJ4 4388 aa5.27□□□□□ -1.57
GGA3-201ENST00000537686 A0A0A0MQY5 61 aa5.27□□□□□ -1.57
GGA3-201ENST00000537686 TPRXLQ17RH7 258 aa5.27□□□□□ -1.57
GGA3-201ENST00000537686 DNAH7Q8WXX0 4024 aa5.25□□□□□ -1.57
GGA3-201ENST00000537686 KRTAP13-3Q3SY46 172 aa5.25□□□□□ -1.57
GGA3-201ENST00000537686 KRTAP10-8P60410 259 aa5.21□□□□□ -1.58
GGA3-201ENST00000537686 DNAH8Q96JB1 4490 aa5.2□□□□□ -1.58
GGA3-201ENST00000537686 KMT2AQ03164 3969 aa5.2□□□□□ -1.58
GGA3-201ENST00000537686 TNP1P09430 55 aa5.2□□□□□ -1.58
GGA3-201ENST00000537686 DNAH11Q96DT5 4516 aa5.2□□□□□ -1.58
GGA3-201ENST00000537686 H0YAA0 97 aa5.18□□□□□ -1.58
GGA3-201ENST00000537686 HECTD4Q9Y4D8 3996 aa5.17□□□□□ -1.58
GGA3-201ENST00000537686 ALMS1Q8TCU4 4167 aa5.17□□□□□ -1.58
GGA3-201ENST00000537686 FRAS1Q86XX4 4008 aa5.16□□□□□ -1.58
GGA3-201ENST00000537686 P0C880 135 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms