RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 PMCHL2Q9BQD1 86 aa1.67□□□□□ -2.14
ECHDC1-223ENST00000534442 SMIM27A0A1W2PRY6 76 aa1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 F8VRH5 84 aa1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 HIST1H2BKO60814 126 aa1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 HIST1H2BJP06899 126 aa1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 HIST1H2BOP23527 126 aa1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 HIST1H2BBP33778 126 aa1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 IFI27P40305 119 aaPredicted RBP1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 HIST1H2BDP58876 126 aa1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 HIST1H2BCP62807 126 aa1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 HIST2H2BEQ16778 126 aa1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 Q5XG85 94 aa1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 Q6ZUT4 128 aa1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 HIST1H2BHQ93079 126 aa1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 SCGB3A1Q96QR1 104 aa1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 C12orf57Q99622 126 aa1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 HIST1H2BNQ99877 126 aa1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 HIST1H2BMQ99879 126 aa1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 VAMP8Q9BV40 100 aa1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 ST20Q9HBF5 79 aa1.66□□□□□ -2.14
ECHDC1-223ENST00000534442 TRAV9-1A0A075B6T8 112 aa1.65□□□□□ -2.15
ECHDC1-223ENST00000534442 LEPROTL1O95214 131 aa1.65□□□□□ -2.15
ECHDC1-223ENST00000534442 Q8IZM0 81 aa1.65□□□□□ -2.15
ECHDC1-223ENST00000534442 HIST3H2BBQ8N257 126 aa1.65□□□□□ -2.15
ECHDC1-223ENST00000534442 C18orf32Q8TCD1 76 aa1.65□□□□□ -2.15
ECHDC1-223ENST00000534442 OBSCN-AS1Q96MR7 158 aa1.65□□□□□ -2.15
ECHDC1-223ENST00000534442 TMEM191AQ9H0A3 160 aa1.65□□□□□ -2.15
ECHDC1-223ENST00000534442 TOMM7Q9P0U1 55 aa1.65□□□□□ -2.15
ECHDC1-223ENST00000534442 HSPB8Q9UJY1 196 aa1.65□□□□□ -2.15
ECHDC1-223ENST00000534442 TRBV6-5A0A0K0K1A5 114 aa1.64□□□□□ -2.15
ECHDC1-223ENST00000534442 TRBV10-2A0A0K0K1G8 114 aa1.64□□□□□ -2.15
ECHDC1-223ENST00000534442 LOC105371267A0A1B0GV96 52 aa1.64□□□□□ -2.15
ECHDC1-223ENST00000534442 TSTD3H0UI37 97 aa1.64□□□□□ -2.15
ECHDC1-223ENST00000534442 HBDP02042 147 aa1.64□□□□□ -2.15
ECHDC1-223ENST00000534442 G0S2P27469 103 aa1.64□□□□□ -2.15
ECHDC1-223ENST00000534442 SPATA45Q537H7 98 aa1.64□□□□□ -2.15
ECHDC1-223ENST00000534442 TMEM170BQ5T4T1 132 aa1.64□□□□□ -2.15
ECHDC1-223ENST00000534442 TOMM6Q96B49 74 aa1.64□□□□□ -2.15
ECHDC1-223ENST00000534442 IFI27L1Q96BM0 104 aa1.64□□□□□ -2.15
ECHDC1-223ENST00000534442 ZNF625Q96I27 306 aaPredicted RBP1.64□□□□□ -2.15
ECHDC1-223ENST00000534442 SMIM2Q9BVW6 85 aa1.64□□□□□ -2.15
ECHDC1-223ENST00000534442 NXT2Q9NPJ8 142 aaKnown RBP1.64□□□□□ -2.15
ECHDC1-223ENST00000534442 CYSLTR1Q9Y271 337 aa1.64□□□□□ -2.15
ECHDC1-223ENST00000534442 PPP1R17O96001 155 aa1.63□□□□□ -2.15
ECHDC1-223ENST00000534442 C3orf79P0CE67 100 aa1.63□□□□□ -2.15
ECHDC1-223ENST00000534442 IGLC6P0CF74 106 aa1.63□□□□□ -2.15
ECHDC1-223ENST00000534442 NPC2P61916 151 aa1.63□□□□□ -2.15
ECHDC1-223ENST00000534442 RPL39P62891 51 aaKnown RBP1.63□□□□□ -2.15
ECHDC1-223ENST00000534442 Q8N8P6 123 aa1.63□□□□□ -2.15
ECHDC1-223ENST00000534442 CHCHD1Q96BP2 118 aaKnown RBP1.63□□□□□ -2.15
ECHDC1-223ENST00000534442 C14orf144Q96I85 54 aa1.63□□□□□ -2.15
ECHDC1-223ENST00000534442 HIST1H2BLQ99880 126 aa1.63□□□□□ -2.15
ECHDC1-223ENST00000534442 C2orf88Q9BSF0 95 aa1.63□□□□□ -2.15
ECHDC1-223ENST00000534442 SPRR2GQ9BYE4 73 aa1.63□□□□□ -2.15
ECHDC1-223ENST00000534442 CYSTM1Q9H1C7 97 aa1.63□□□□□ -2.15
ECHDC1-223ENST00000534442 TRBV27A0A0K0K1C4 114 aa1.62□□□□□ -2.15
ECHDC1-223ENST00000534442 ETDCA0A1B0GVM5 59 aa1.62□□□□□ -2.15
ECHDC1-223ENST00000534442 ERC2-IT1O76042 136 aa1.62□□□□□ -2.15
ECHDC1-223ENST00000534442 DPM2O94777 84 aa1.62□□□□□ -2.15
ECHDC1-223ENST00000534442 SPINK8P0C7L1 97 aa1.62□□□□□ -2.15
ECHDC1-223ENST00000534442 SMIM6P0DI80 62 aa1.62□□□□□ -2.15
ECHDC1-223ENST00000534442 MEIG1Q5JSS6 88 aa1.62□□□□□ -2.15
ECHDC1-223ENST00000534442 SYS1-DBNDD2H3BUS1 97 aa1.61□□□□□ -2.15
ECHDC1-223ENST00000534442 IGKCP01834 107 aa1.61□□□□□ -2.15
ECHDC1-223ENST00000534442 POLR2KP53803 58 aaKnown RBP1.61□□□□□ -2.15
ECHDC1-223ENST00000534442 FXYD2P54710 66 aa1.61□□□□□ -2.15
ECHDC1-223ENST00000534442 PYY3Q5JQD4 70 aa1.61□□□□□ -2.15
ECHDC1-223ENST00000534442 RAB37Q96AX2 223 aa1.61□□□□□ -2.15
ECHDC1-223ENST00000534442 Q96NJ1 140 aa1.61□□□□□ -2.15
ECHDC1-223ENST00000534442 SIGMAR1Q99720 223 aa1.61□□□□□ -2.15
ECHDC1-223ENST00000534442 LAMTOR2Q9Y2Q5 125 aa1.61□□□□□ -2.15
ECHDC1-223ENST00000534442 ZNF815PA8K554 130 aa1.6□□□□□ -2.15
ECHDC1-223ENST00000534442 H3BRM9 83 aa1.6□□□□□ -2.15
ECHDC1-223ENST00000534442 SPRR1AP35321 89 aa1.6□□□□□ -2.15
ECHDC1-223ENST00000534442 MRPS36P82909 103 aaKnown RBP1.6□□□□□ -2.15
ECHDC1-223ENST00000534442 SFTA2Q6UW10 78 aa1.6□□□□□ -2.15
ECHDC1-223ENST00000534442 C7orf65Q6ZTY9 151 aa1.6□□□□□ -2.15
ECHDC1-223ENST00000534442 COA5Q86WW8 74 aa1.6□□□□□ -2.15
ECHDC1-223ENST00000534442 TMEM141Q96I45 108 aa1.6□□□□□ -2.15
ECHDC1-223ENST00000534442 C20orf78Q9BR46 151 aa1.6□□□□□ -2.15
ECHDC1-223ENST00000534442 NAA38Q9BRA0 125 aaKnown RBP1.6□□□□□ -2.15
ECHDC1-223ENST00000534442 SPANXA1Q9NS26 97 aa1.6□□□□□ -2.15
ECHDC1-223ENST00000534442 LINC00587B1AMM8 73 aa1.59□□□□□ -2.15
ECHDC1-223ENST00000534442 K7EMI3 77 aa1.59□□□□□ -2.15
ECHDC1-223ENST00000534442 PLNP26678 52 aa1.59□□□□□ -2.15
ECHDC1-223ENST00000534442 LINC00158P58513 81 aa1.59□□□□□ -2.15
ECHDC1-223ENST00000534442 OR13C6PQ8NH95 151 aa1.59□□□□□ -2.15
ECHDC1-223ENST00000534442 UQCR10Q9UDW1 63 aa1.59□□□□□ -2.15
ECHDC1-223ENST00000534442 A0A1B0GV72 72 aa1.58□□□□□ -2.16
ECHDC1-223ENST00000534442 M0R143 59 aa1.58□□□□□ -2.16
ECHDC1-223ENST00000534442 TCL1BO95988 128 aa1.58□□□□□ -2.16
ECHDC1-223ENST00000534442 LINC01545Q5VT33 79 aa1.58□□□□□ -2.16
ECHDC1-223ENST00000534442 KCNQ1DNQ9H478 68 aa1.58□□□□□ -2.16
ECHDC1-223ENST00000534442 CST9LQ9H4G1 147 aa1.58□□□□□ -2.16
ECHDC1-223ENST00000534442 NHP2Q9NX24 153 aaKnown RBP1.58□□□□□ -2.16
ECHDC1-223ENST00000534442 MYMXA0A1B0GTQ4 84 aa1.57□□□□□ -2.16
ECHDC1-223ENST00000534442 FAM236AA0A1B0GUQ0 79 aa1.57□□□□□ -2.16
ECHDC1-223ENST00000534442 FAM236BA0A1B0GV22 79 aa1.57□□□□□ -2.16
ECHDC1-223ENST00000534442 K7ERJ3 54 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms