RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 NDUFB1O75438 58 aa9.48□□□□□ -0.89
CTSB-229ENST00000533572 DEFB116Q30KQ4 102 aa9.47□□□□□ -0.89
CTSB-229ENST00000533572 Q6ZVQ6 151 aa9.47□□□□□ -0.89
CTSB-229ENST00000533572 LINC00846Q9NV44 126 aa9.47□□□□□ -0.89
CTSB-229ENST00000533572 SEC61BP60468 96 aaKnown RBP9.46□□□□□ -0.9
CTSB-229ENST00000533572 MUC17Q685J3 4493 aa9.45□□□□□ -0.9
CTSB-229ENST00000533572 BPY2O14599 106 aa9.44□□□□□ -0.9
CTSB-229ENST00000533572 A8MWP4 228 aa9.43□□□□□ -0.9
CTSB-229ENST00000533572 A0A1B0GVX0 72 aa9.42□□□□□ -0.9
CTSB-229ENST00000533572 C9orf92A6NGG3 77 aa9.42□□□□□ -0.9
CTSB-229ENST00000533572 FAT4Q6V0I7 4981 aa9.41□□□□□ -0.9
CTSB-229ENST00000533572 C8orf87E5RJ46 101 aa9.41□□□□□ -0.9
CTSB-229ENST00000533572 XP32Q5T750 250 aa9.41□□□□□ -0.9
CTSB-229ENST00000533572 LINC00313P59037 77 aa9.39□□□□□ -0.91
CTSB-229ENST00000533572 IGHV6-1A0A0B4J1U7 121 aa9.38□□□□□ -0.91
CTSB-229ENST00000533572 DSCR10P59022 87 aa9.36□□□□□ -0.91
CTSB-229ENST00000533572 PRR15Q8IV56 129 aa9.36□□□□□ -0.91
CTSB-229ENST00000533572 IGKV3D-7A0A0C4DH55 119 aa9.35□□□□□ -0.91
CTSB-229ENST00000533572 KRTAP9-6A0A140TA67 174 aa9.35□□□□□ -0.91
CTSB-229ENST00000533572 CXCL6P80162 114 aa9.35□□□□□ -0.91
CTSB-229ENST00000533572 ATP5EP2Q5VTU8 51 aa9.33□□□□□ -0.92
CTSB-229ENST00000533572 K7ERU9 68 aa9.31□□□□□ -0.92
CTSB-229ENST00000533572 C8orf17Q9NRJ1 99 aa9.31□□□□□ -0.92
CTSB-229ENST00000533572 K7EQZ3 153 aa9.3□□□□□ -0.92
CTSB-229ENST00000533572 Q75L30 129 aa9.29□□□□□ -0.92
CTSB-229ENST00000533572 LINC00643Q86TS7 51 aa9.29□□□□□ -0.92
CTSB-229ENST00000533572 RPL37P61927 97 aaKnown RBP9.28□□□□□ -0.92
CTSB-229ENST00000533572 C20orf166-AS1Q96NR2 134 aa9.28□□□□□ -0.92
CTSB-229ENST00000533572 LCE2AQ5TA79 106 aaPredicted RBP9.27□□□□□ -0.93
CTSB-229ENST00000533572 PCOTHQ58A44 107 aa9.26□□□□□ -0.93
CTSB-229ENST00000533572 NOTCH2NLQ7Z3S9 236 aa9.26□□□□□ -0.93
CTSB-229ENST00000533572 A8MUU9 505 aa9.25□□□□□ -0.93
CTSB-229ENST00000533572 KRTAP16-1A8MUX0 517 aa9.25□□□□□ -0.93
CTSB-229ENST00000533572 MMP24-AS1A0A0U1RRL7 71 aa9.23□□□□□ -0.93
CTSB-229ENST00000533572 TMEM254Q8TBM7 123 aa9.23□□□□□ -0.93
CTSB-229ENST00000533572 KRTAP4-1Q9BYQ7 146 aa9.23□□□□□ -0.93
CTSB-229ENST00000533572 hDV103S1A0JD37 113 aa9.22□□□□□ -0.93
CTSB-229ENST00000533572 Q8N9L7 120 aa9.22□□□□□ -0.93
CTSB-229ENST00000533572 ATP11AUNQ6ZP68 121 aa9.21□□□□□ -0.94
CTSB-229ENST00000533572 MRPL34Q9BQ48 92 aaKnown RBP9.2□□□□□ -0.94
CTSB-229ENST00000533572 Q8N9P0 234 aaPredicted RBP9.19□□□□□ -0.94
CTSB-229ENST00000533572 HCG22E2RYF7 251 aa9.18□□□□□ -0.94
CTSB-229ENST00000533572 CASC2Q6XLA1 102 aa9.18□□□□□ -0.94
CTSB-229ENST00000533572 HIST1H4AP62805 103 aaKnown RBP9.14□□□□□ -0.95
CTSB-229ENST00000533572 WFDC13Q8IUB5 93 aa9.14□□□□□ -0.95
CTSB-229ENST00000533572 NDUFS5O43920 106 aa9.1□□□□□ -0.95
CTSB-229ENST00000533572 FSIP2Q5CZC0 6907 aa9.08□□□□□ -0.96
CTSB-229ENST00000533572 ZCCHC13Q8WW36 166 aaKnown RBP9.07□□□□□ -0.96
CTSB-229ENST00000533572 IMUPQ9GZP8 106 aa9.06□□□□□ -0.96
CTSB-229ENST00000533572 TP53AIP1Q9HCN2 124 aa9.04□□□□□ -0.96
CTSB-229ENST00000533572 A0A087WVE0 104 aa9□□□□□ -0.97
CTSB-229ENST00000533572 COX6B2Q6YFQ2 88 aa8.99□□□□□ -0.97
CTSB-229ENST00000533572 MT-ATP8P03928 68 aa8.96□□□□□ -0.98
CTSB-229ENST00000533572 LCE2CQ5TA81 110 aa8.96□□□□□ -0.98
CTSB-229ENST00000533572 KRTAP19-2Q3LHN2 52 aa8.95□□□□□ -0.98
CTSB-229ENST00000533572 UQCRQO14949 82 aa8.9□□□□□ -0.98
CTSB-229ENST00000533572 LCE2DQ5TA82 110 aaPredicted RBP8.9□□□□□ -0.98
CTSB-229ENST00000533572 CRCT1Q9UGL9 99 aa8.9□□□□□ -0.98
CTSB-229ENST00000533572 SCGB1A1P11684 91 aa8.89□□□□□ -0.99
CTSB-229ENST00000533572 MT1HP80294 61 aa8.89□□□□□ -0.99
CTSB-229ENST00000533572 Q5W150 140 aa8.89□□□□□ -0.99
CTSB-229ENST00000533572 SPINK7P58062 85 aa8.88□□□□□ -0.99
CTSB-229ENST00000533572 TRAV22A0A0B4J277 110 aa8.85□□□□□ -0.99
CTSB-229ENST00000533572 M0R2T5 61 aa8.85□□□□□ -0.99
CTSB-229ENST00000533572 C7orf65Q6ZTY9 151 aa8.85□□□□□ -0.99
CTSB-229ENST00000533572 ATOX1O00244 68 aa8.83□□□□□ -1
CTSB-229ENST00000533572 SMIM20Q8N5G0 67 aa8.82□□□□□ -1
CTSB-229ENST00000533572 OCR1Q9BZK8 76 aa8.82□□□□□ -1
CTSB-229ENST00000533572 FAM236AA0A1B0GUQ0 79 aa8.81□□□□□ -1
CTSB-229ENST00000533572 FAM236BA0A1B0GV22 79 aa8.81□□□□□ -1
CTSB-229ENST00000533572 IGKV2D-30A0A075B6S6 120 aa8.8□□□□□ -1
CTSB-229ENST00000533572 IGKV2-30P06310 120 aa8.8□□□□□ -1
CTSB-229ENST00000533572 RBM12B-AS1Q9P1G2 102 aa8.8□□□□□ -1
CTSB-229ENST00000533572 HRES1P13985 223 aa8.78□□□□□ -1
CTSB-229ENST00000533572 C5orf47Q569G3 176 aa8.78□□□□□ -1
CTSB-229ENST00000533572 LOC101927531A0A1B0GV80 90 aa8.77□□□□□ -1.01
CTSB-229ENST00000533572 H0Y9P7 68 aa8.77□□□□□ -1.01
CTSB-229ENST00000533572 MP68P56378 58 aa8.77□□□□□ -1.01
CTSB-229ENST00000533572 FLGP20930 4061 aaPredicted RBP8.75□□□□□ -1.01
CTSB-229ENST00000533572 MPLKIPQ8TAP9 179 aa8.74□□□□□ -1.01
CTSB-229ENST00000533572 H3BPC8 53 aa8.73□□□□□ -1.01
CTSB-229ENST00000533572 FAM236DA0A1B0GTK5 79 aa8.72□□□□□ -1.01
CTSB-229ENST00000533572 FAM236CP0DP71 79 aa8.72□□□□□ -1.01
CTSB-229ENST00000533572 KRTAP10-6P60371 365 aaPredicted RBP8.72□□□□□ -1.01
CTSB-229ENST00000533572 TRAV7A0A075B6U4 112 aa8.71□□□□□ -1.02
CTSB-229ENST00000533572 CYP4F30PQ9H0H9 118 aa8.7□□□□□ -1.02
CTSB-229ENST00000533572 C1orf64Q8NEQ6 169 aa8.69□□□□□ -1.02
CTSB-229ENST00000533572 SVIPQ8NHG7 77 aa8.69□□□□□ -1.02
CTSB-229ENST00000533572 LORP23490 312 aaPredicted RBP8.68□□□□□ -1.02
CTSB-229ENST00000533572 LINC00208Q96KT6 92 aa8.67□□□□□ -1.02
CTSB-229ENST00000533572 SERP2Q8N6R1 65 aa8.61□□□□□ -1.03
CTSB-229ENST00000533572 C4orf26Q17RF5 130 aa8.59□□□□□ -1.03
CTSB-229ENST00000533572 H1FX-AS1Q4G0G2 97 aa8.54□□□□□ -1.04
CTSB-229ENST00000533572 KLKP1Q107X0 134 aa8.49□□□□□ -1.05
CTSB-229ENST00000533572 COX7CP15954 63 aa8.48□□□□□ -1.05
CTSB-229ENST00000533572 PCP4P48539 62 aa8.48□□□□□ -1.05
CTSB-229ENST00000533572 A8MUN3 132 aa8.47□□□□□ -1.05
CTSB-229ENST00000533572 C20orf197Q8N268 126 aa8.46□□□□□ -1.06
CTSB-229ENST00000533572 ANAPC13Q9BS18 74 aa8.45□□□□□ -1.06
CTSB-229ENST00000533572 KRTAP3-1Q9BYR8 98 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms