RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 SPRR1AP35321 89 aa7.55□□□□□ -1.2
BDNF-218ENST00000533246 ZFHX3Q15911 3703 aa7.55□□□□□ -1.2
BDNF-218ENST00000533246 CSMD2Q7Z408 3487 aa7.54□□□□□ -1.2
BDNF-218ENST00000533246 ZCCHC13Q8WW36 166 aaKnown RBP7.54□□□□□ -1.2
BDNF-218ENST00000533246 OTOGQ6ZRI0 2925 aa7.53□□□□□ -1.2
BDNF-218ENST00000533246 KRTAP16-1A8MUX0 517 aa7.52□□□□□ -1.21
BDNF-218ENST00000533246 CRIPTQ9P021 101 aa7.51□□□□□ -1.21
BDNF-218ENST00000533246 LINC00304Q8N9R0 145 aa7.51□□□□□ -1.21
BDNF-218ENST00000533246 PANO1I0J062 215 aa7.5□□□□□ -1.21
BDNF-218ENST00000533246 SPENQ96T58 3664 aaKnown RBP7.49□□□□□ -1.21
BDNF-218ENST00000533246 Q8N1X5 172 aa7.48□□□□□ -1.21
BDNF-218ENST00000533246 HRES1P13985 223 aa7.46□□□□□ -1.21
BDNF-218ENST00000533246 ROMO1P60602 79 aa7.44□□□□□ -1.22
BDNF-218ENST00000533246 SRRM2Q9UQ35 2752 aaKnown RBP7.44□□□□□ -1.22
BDNF-218ENST00000533246 Q6ZR54 194 aa7.43□□□□□ -1.22
BDNF-218ENST00000533246 NBPF19A0A087WUL8 3843 aa7.43□□□□□ -1.22
BDNF-218ENST00000533246 TGP01266 2768 aa7.42□□□□□ -1.22
BDNF-218ENST00000533246 MMP24-AS1A0A0U1RRL7 71 aa7.41□□□□□ -1.22
BDNF-218ENST00000533246 ASB16-AS1Q495Z4 193 aa7.41□□□□□ -1.22
BDNF-218ENST00000533246 TENM2Q9NT68 2774 aa7.41□□□□□ -1.22
BDNF-218ENST00000533246 LINC00472Q9H8W2 130 aa7.4□□□□□ -1.22
BDNF-218ENST00000533246 KRTAP4-16G5E9R7 235 aaPredicted RBP7.39□□□□□ -1.23
BDNF-218ENST00000533246 KRTAP11-1Q8IUC1 163 aa7.39□□□□□ -1.23
BDNF-218ENST00000533246 NDUFAF8A1L188 74 aa7.37□□□□□ -1.23
BDNF-218ENST00000533246 KRTAP10-2P60368 255 aa7.37□□□□□ -1.23
BDNF-218ENST00000533246 PLAC8Q9NZF1 115 aa7.37□□□□□ -1.23
BDNF-218ENST00000533246 LCE6AA0A183 80 aa7.36□□□□□ -1.23
BDNF-218ENST00000533246 LUZP6Q538Z0 58 aa7.35□□□□□ -1.23
BDNF-218ENST00000533246 KRTAP7-1Q8IUC3 87 aa7.35□□□□□ -1.23
BDNF-218ENST00000533246 SPRR1BP22528 89 aa7.34□□□□□ -1.23
BDNF-218ENST00000533246 KRTAP10-1P60331 282 aa7.3□□□□□ -1.24
BDNF-218ENST00000533246 SPATA8Q6RVD6 105 aa7.28□□□□□ -1.24
BDNF-218ENST00000533246 KRTAP25-1Q3LHN0 102 aa7.27□□□□□ -1.25
BDNF-218ENST00000533246 A0A087X002 238 aa7.26□□□□□ -1.25
BDNF-218ENST00000533246 NOTCH2NLQ7Z3S9 236 aa7.26□□□□□ -1.25
BDNF-218ENST00000533246 DMAC1Q96GE9 116 aa7.26□□□□□ -1.25
BDNF-218ENST00000533246 A0A0D9SG42 100 aa7.25□□□□□ -1.25
BDNF-218ENST00000533246 J3QL48 77 aa7.25□□□□□ -1.25
BDNF-218ENST00000533246 Q5W150 140 aa7.21□□□□□ -1.25
BDNF-218ENST00000533246 KRTAP29-1A8MX34 341 aaPredicted RBP7.19□□□□□ -1.26
BDNF-218ENST00000533246 Q6ZRN7 208 aaPredicted RBP7.18□□□□□ -1.26
BDNF-218ENST00000533246 COX6B2Q6YFQ2 88 aa7.16□□□□□ -1.26
BDNF-218ENST00000533246 A8MUU9 505 aa7.14□□□□□ -1.27
BDNF-218ENST00000533246 C20orf166-AS1Q96NR2 134 aa7.13□□□□□ -1.27
BDNF-218ENST00000533246 LINC00483Q53H64 154 aa7.12□□□□□ -1.27
BDNF-218ENST00000533246 A0A1B0GU33 70 aa7.1□□□□□ -1.27
BDNF-218ENST00000533246 BSNQ9UPA5 3926 aa7.09□□□□□ -1.28
BDNF-218ENST00000533246 TRRAPQ9Y4A5 3859 aa7.08□□□□□ -1.28
BDNF-218ENST00000533246 FBN3Q75N90 2809 aa7.06□□□□□ -1.28
BDNF-218ENST00000533246 Q6ZSA8 131 aa7.04□□□□□ -1.28
BDNF-218ENST00000533246 KRTAP13-1Q8IUC0 172 aa7.02□□□□□ -1.29
BDNF-218ENST00000533246 KRTAP13-2Q52LG2 175 aa7□□□□□ -1.29
BDNF-218ENST00000533246 Q5VSD8 79 aa6.99□□□□□ -1.29
BDNF-218ENST00000533246 COL7A1Q02388 2944 aa6.97□□□□□ -1.29
BDNF-218ENST00000533246 SEC61BP60468 96 aaKnown RBP6.96□□□□□ -1.29
BDNF-218ENST00000533246 VPS13CQ709C8 3753 aa6.93□□□□□ -1.3
BDNF-218ENST00000533246 P0C880 135 aa6.88□□□□□ -1.31
BDNF-218ENST00000533246 S4R3F8 94 aa6.85□□□□□ -1.31
BDNF-218ENST00000533246 MEGF8Q7Z7M0 2845 aa6.82□□□□□ -1.32
BDNF-218ENST00000533246 RPL37P61927 97 aaKnown RBP6.8□□□□□ -1.32
BDNF-218ENST00000533246 CAMK2N1Q7Z7J9 78 aa6.8□□□□□ -1.32
BDNF-218ENST00000533246 H1FX-AS1Q4G0G2 97 aa6.79□□□□□ -1.32
BDNF-218ENST00000533246 M0R2T5 61 aa6.77□□□□□ -1.33
BDNF-218ENST00000533246 R4GN34 69 aa6.76□□□□□ -1.33
BDNF-218ENST00000533246 C10orf95Q9H7T3 257 aa6.75□□□□□ -1.33
BDNF-218ENST00000533246 ZNF469Q96JG9 3925 aaPredicted RBP6.73□□□□□ -1.33
BDNF-218ENST00000533246 KRTAP1-4P0C5Y4 121 aa6.72□□□□□ -1.33
BDNF-218ENST00000533246 ANK3Q12955 4377 aaKnown RBP6.69□□□□□ -1.34
BDNF-218ENST00000533246 CSMD3Q7Z407 3707 aa6.68□□□□□ -1.34
BDNF-218ENST00000533246 M0QZ58 72 aa6.67□□□□□ -1.34
BDNF-218ENST00000533246 H0YAA0 97 aa6.67□□□□□ -1.34
BDNF-218ENST00000533246 RPS29P62273 56 aaKnown RBP6.61□□□□□ -1.35
BDNF-218ENST00000533246 KRTAP21-3Q3LHN1 58 aa6.46□□□□□ -1.37
BDNF-218ENST00000533246 TPRXLQ17RH7 258 aa6.46□□□□□ -1.38
BDNF-218ENST00000533246 XP32Q5T750 250 aa6.44□□□□□ -1.38
BDNF-218ENST00000533246 PLAC4Q8WY50 150 aa6.43□□□□□ -1.38
BDNF-218ENST00000533246 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
BDNF-218ENST00000533246 KRTAP13-3Q3SY46 172 aa6.38□□□□□ -1.39
BDNF-218ENST00000533246 A0A1B0GVY2 172 aa6.28□□□□□ -1.4
BDNF-218ENST00000533246 AKAP9Q99996 3911 aa6.25□□□□□ -1.41
BDNF-218ENST00000533246 KRTAP10-8P60410 259 aa6.23□□□□□ -1.41
BDNF-218ENST00000533246 HUWE1Q7Z6Z7 4374 aaKnown RBP6.17□□□□□ -1.42
BDNF-218ENST00000533246 KRTAP3-1Q9BYR8 98 aa6.16□□□□□ -1.42
BDNF-218ENST00000533246 DNHD1Q96M86 4753 aa6.11□□□□□ -1.43
BDNF-218ENST00000533246 TNP1P09430 55 aa6.06□□□□□ -1.44
BDNF-218ENST00000533246 KRTAP12-2P59991 146 aa6□□□□□ -1.45
BDNF-218ENST00000533246 DNAH10Q8IVF4 4471 aa5.98□□□□□ -1.45
BDNF-218ENST00000533246 PLECQ15149 4684 aaKnown RBP5.97□□□□□ -1.45
BDNF-218ENST00000533246 KRTAP10-10P60014 251 aa5.96□□□□□ -1.46
BDNF-218ENST00000533246 DNAH11Q96DT5 4516 aa5.96□□□□□ -1.46
BDNF-218ENST00000533246 DNAH9Q9NYC9 4486 aa5.95□□□□□ -1.46
BDNF-218ENST00000533246 KRTAP13-4Q3LI77 160 aa5.95□□□□□ -1.46
BDNF-218ENST00000533246 KRTAP10-6P60371 365 aaPredicted RBP5.9□□□□□ -1.46
BDNF-218ENST00000533246 DNAH5Q8TE73 4624 aa5.89□□□□□ -1.47
BDNF-218ENST00000533246 KRTAP12-1P59990 96 aa5.89□□□□□ -1.47
BDNF-218ENST00000533246 PRO2289Q9P1D8 64 aa5.89□□□□□ -1.47
BDNF-218ENST00000533246 MT1HL1P0DM35 61 aa5.88□□□□□ -1.47
BDNF-218ENST00000533246 PP632Q6XCG6 107 aa5.87□□□□□ -1.47
BDNF-218ENST00000533246 KRTAP10-4P60372 401 aaPredicted RBP5.86□□□□□ -1.47
BDNF-218ENST00000533246 KRTAP4-5Q9BYR2 181 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms