RNA–Protein interactions for RNA: ENST00000528873.2

GEN1-204, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 5

Gene GEN1, Length 871 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-204ENST00000528873 ZANQ9Y493 2812 aa0.68□□□□□ -2.3
GEN1-204ENST00000528873 EPPK1P58107 5090 aaKnown RBP0.68□□□□□ -2.3
GEN1-204ENST00000528873 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.67□□□□□ -2.37e-14■■■■■ 51.9
GEN1-204ENST00000528873 SONP18583 2426 aaKnown RBP0.67□□□□□ -2.3
GEN1-204ENST00000528873 SMIM31A0A1B0GVY4 71 aa0.67□□□□□ -2.3
GEN1-204ENST00000528873 WFDC9Q8NEX5 89 aa0.67□□□□□ -2.3
GEN1-204ENST00000528873 PRO0255Q9UI72 69 aa0.67□□□□□ -2.3
GEN1-204ENST00000528873 ANK2Q01484 3957 aa0.67□□□□□ -2.3
GEN1-204ENST00000528873 VPS13CQ709C8 3753 aa0.67□□□□□ -2.3
GEN1-204ENST00000528873 FXYD6-FXYD2A0A087WZ82 144 aa0.66□□□□□ -2.3
GEN1-204ENST00000528873 UMAD1C9J7I0 102 aa0.66□□□□□ -2.3
GEN1-204ENST00000528873 H3BVH4 76 aa0.66□□□□□ -2.3
GEN1-204ENST00000528873 IFI27P40305 119 aaPredicted RBP0.66□□□□□ -2.3
GEN1-204ENST00000528873 COX6A2Q02221 97 aa0.66□□□□□ -2.3
GEN1-204ENST00000528873 TNCP24821 2201 aa0.66□□□□□ -2.3
GEN1-204ENST00000528873 NFAT5O94916 1531 aa0.65□□□□□ -2.31
GEN1-204ENST00000528873 MUC2Q02817 5179 aa0.65□□□□□ -2.31
GEN1-204ENST00000528873 HMGA1P17096 107 aaKnown RBP0.65□□□□□ -2.31
GEN1-204ENST00000528873 CNFNQ9BYD5 112 aa0.65□□□□□ -2.31
GEN1-204ENST00000528873 COL7A1Q02388 2944 aa0.65□□□□□ -2.31
GEN1-204ENST00000528873 RYR2Q92736 4967 aa0.65□□□□□ -2.31
GEN1-204ENST00000528873 PKDREJQ9NTG1 2253 aa0.64□□□□□ -2.31
GEN1-204ENST00000528873 BSNQ9UPA5 3926 aa0.64□□□□□ -2.31
GEN1-204ENST00000528873 K7EQZ3 153 aa0.64□□□□□ -2.31
GEN1-204ENST00000528873 COX7BP24311 80 aa0.64□□□□□ -2.31
GEN1-204ENST00000528873 ATP5EP2Q5VTU8 51 aa0.64□□□□□ -2.31
GEN1-204ENST00000528873 CD163L1Q9NR16 1453 aa0.64□□□□□ -2.31
GEN1-204ENST00000528873 SVEP1Q4LDE5 3571 aa0.64□□□□□ -2.31
GEN1-204ENST00000528873 ZNF469Q96JG9 3925 aaPredicted RBP0.64□□□□□ -2.31
GEN1-204ENST00000528873 GPR98Q8WXG9 6306 aa0.63□□□□□ -2.31
GEN1-204ENST00000528873 PRKDCP78527 4128 aaKnown RBP0.63□□□□□ -2.31
GEN1-204ENST00000528873 ANKRD36CQ5JPF3 1778 aa0.63□□□□□ -2.31
GEN1-204ENST00000528873 ABCA13Q86UQ4 5058 aa0.63□□□□□ -2.31
GEN1-204ENST00000528873 NREPQ16612 68 aa0.63□□□□□ -2.31
GEN1-204ENST00000528873 PIGYQ3MUY2 71 aa0.63□□□□□ -2.31
GEN1-204ENST00000528873 Q8IZM0 81 aa0.63□□□□□ -2.31
GEN1-204ENST00000528873 MUC5ACP98088 5654 aa0.62□□□□□ -2.31
GEN1-204ENST00000528873 HERC2O95714 4834 aa0.62□□□□□ -2.31
GEN1-204ENST00000528873 KNL1Q8NG31 2342 aa0.61□□□□□ -2.31
GEN1-204ENST00000528873 STAB2Q8WWQ8 2551 aa0.61□□□□□ -2.31
GEN1-204ENST00000528873 TRRAPQ9Y4A5 3859 aa0.61□□□□□ -2.31
GEN1-204ENST00000528873 SPTY2D1-AS1A0A0U1RR47 76 aa0.61□□□□□ -2.31
GEN1-204ENST00000528873 NDUFB1O75438 58 aa0.61□□□□□ -2.31
GEN1-204ENST00000528873 COX8AP10176 69 aa0.61□□□□□ -2.31
GEN1-204ENST00000528873 LELP1Q5T871 98 aa0.61□□□□□ -2.31
GEN1-204ENST00000528873 HERC1Q15751 4861 aa0.61□□□□□ -2.31
GEN1-204ENST00000528873 AKAP6Q13023 2319 aa0.61□□□□□ -2.31
GEN1-204ENST00000528873 LCE6AA0A183 80 aa0.6□□□□□ -2.31
GEN1-204ENST00000528873 LOC730098B7Z3J9 87 aa0.6□□□□□ -2.31
GEN1-204ENST00000528873 ANKRD50Q9ULJ7 1429 aa0.6□□□□□ -2.31
GEN1-204ENST00000528873 DMBT1Q9UGM3 2413 aaPredicted RBP0.59□□□□□ -2.31
GEN1-204ENST00000528873 CPSF4LA6NMK7 179 aaKnown RBP0.59□□□□□ -2.31
GEN1-204ENST00000528873 I3L3M4 83 aa0.59□□□□□ -2.31
GEN1-204ENST00000528873 SPRR1AP35321 89 aa0.59□□□□□ -2.31
GEN1-204ENST00000528873 KRTAP19-3Q7Z4W3 81 aa0.59□□□□□ -2.31
GEN1-204ENST00000528873 GNG13Q9P2W3 67 aa0.59□□□□□ -2.31
GEN1-204ENST00000528873 FAT4Q6V0I7 4981 aa0.59□□□□□ -2.32
GEN1-204ENST00000528873 RNF213Q63HN8 5207 aa0.59□□□□□ -2.32
GEN1-204ENST00000528873 FRAS1Q86XX4 4008 aa0.59□□□□□ -2.32
GEN1-204ENST00000528873 CSMD3Q7Z407 3707 aa0.59□□□□□ -2.32
GEN1-204ENST00000528873 HECTD4Q9Y4D8 3996 aa0.58□□□□□ -2.32
GEN1-204ENST00000528873 LYSTQ99698 3801 aa0.58□□□□□ -2.32
GEN1-204ENST00000528873 FSIP2Q5CZC0 6907 aa0.58□□□□□ -2.32
GEN1-204ENST00000528873 NDUFA4O00483 81 aa0.58□□□□□ -2.32
GEN1-204ENST00000528873 SPRR1BP22528 89 aa0.58□□□□□ -2.32
GEN1-204ENST00000528873 MRPL34Q9BQ48 92 aaKnown RBP0.58□□□□□ -2.32
GEN1-204ENST00000528873 APLNQ9ULZ1 77 aa0.58□□□□□ -2.32
GEN1-204ENST00000528873 HRNRQ86YZ3 2850 aaPredicted RBP0.58□□□□□ -2.32
GEN1-204ENST00000528873 SRRM2Q9UQ35 2752 aaKnown RBP0.57□□□□□ -2.32
GEN1-204ENST00000528873 C3orf79P0CE67 100 aa0.57□□□□□ -2.32
GEN1-204ENST00000528873 COX6B1P14854 86 aa0.57□□□□□ -2.32
GEN1-204ENST00000528873 KLK9Q2XQG4 91 aa0.57□□□□□ -2.32
GEN1-204ENST00000528873 ENHOQ6UWT2 76 aa0.57□□□□□ -2.32
GEN1-204ENST00000528873 USMG5Q96IX5 58 aa0.57□□□□□ -2.32
GEN1-204ENST00000528873 CMYA5Q8N3K9 4069 aa0.57□□□□□ -2.32
GEN1-204ENST00000528873 DYNC2H1Q8NCM8 4307 aaKnown RBP0.56□□□□□ -2.32
GEN1-204ENST00000528873 A0A087WWC5 75 aa0.56□□□□□ -2.32
GEN1-204ENST00000528873 KRTAP2-3P0C7H8 128 aa0.56□□□□□ -2.32
GEN1-204ENST00000528873 ATXN8Q156A1 80 aa0.56□□□□□ -2.32
GEN1-204ENST00000528873 DEFB124Q8NES8 71 aa0.56□□□□□ -2.32
GEN1-204ENST00000528873 S100ZQ8WXG8 99 aa0.56□□□□□ -2.32
GEN1-204ENST00000528873 KRTAP2-4Q9BYR9 128 aa0.56□□□□□ -2.32
GEN1-204ENST00000528873 KRTAP2-1Q9BYU5 128 aa0.56□□□□□ -2.32
GEN1-204ENST00000528873 KMT2AQ03164 3969 aa0.55□□□□□ -2.32
GEN1-204ENST00000528873 NDUFA3O95167 84 aa0.55□□□□□ -2.32
GEN1-204ENST00000528873 H1FX-AS1Q4G0G2 97 aa0.55□□□□□ -2.32
GEN1-204ENST00000528873 FXYD6Q9H0Q3 95 aa0.55□□□□□ -2.32
GEN1-204ENST00000528873 SFTA3P0C7M3 94 aa0.54□□□□□ -2.32
GEN1-204ENST00000528873 RPL38P63173 70 aaKnown RBP0.54□□□□□ -2.32
GEN1-204ENST00000528873 Q5VSD8 79 aa0.54□□□□□ -2.32
GEN1-204ENST00000528873 DEFB105AQ8NG35 78 aa0.54□□□□□ -2.32
GEN1-204ENST00000528873 DNAH1Q9P2D7 4330 aa0.54□□□□□ -2.32
GEN1-204ENST00000528873 WNK2Q9Y3S1 2297 aa0.53□□□□□ -2.32
GEN1-204ENST00000528873 LINC01549A6NIU2 74 aa0.53□□□□□ -2.32
GEN1-204ENST00000528873 SMR3AQ99954 134 aa0.53□□□□□ -2.32
GEN1-204ENST00000528873 DNAH7Q8WXX0 4024 aa0.53□□□□□ -2.32
GEN1-204ENST00000528873 PKHD1P08F94 4074 aa0.53□□□□□ -2.32
GEN1-204ENST00000528873 SACSQ9NZJ4 4579 aa0.53□□□□□ -2.33
GEN1-204ENST00000528873 PRH1P02810 166 aa0.52□□□□□ -2.33
GEN1-204ENST00000528873 SSPOA2VEC9 5147 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms