RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 PANO1I0J062 215 aa7.4□□□□□ -1.22
TSKU-203ENST00000527881 CIRBP-AS1Q8TBR5 109 aa7.4□□□□□ -1.22
TSKU-203ENST00000527881 TENM4Q6N022 2769 aa7.4□□□□□ -1.22
TSKU-203ENST00000527881 ZNF706Q9Y5V0 76 aaPredicted RBP7.39□□□□□ -1.23
TSKU-203ENST00000527881 SPINK1P00995 79 aa7.39□□□□□ -1.23
TSKU-203ENST00000527881 CSMD3Q7Z407 3707 aa7.38□□□□□ -1.23
TSKU-203ENST00000527881 IGKV2D-30A0A075B6S6 120 aa7.35□□□□□ -1.23
TSKU-203ENST00000527881 IGKV2-30P06310 120 aa7.35□□□□□ -1.23
TSKU-203ENST00000527881 C1orf134Q5TEV5 83 aa7.35□□□□□ -1.23
TSKU-203ENST00000527881 KRTAP13-1Q8IUC0 172 aa7.35□□□□□ -1.23
TSKU-203ENST00000527881 WWC2-AS2Q96NR7 200 aa7.35□□□□□ -1.23
TSKU-203ENST00000527881 FAM229AH3BQW9 127 aa7.33□□□□□ -1.24
TSKU-203ENST00000527881 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.32□□□□□ -1.24
TSKU-203ENST00000527881 KRTAP13-3Q3SY46 172 aa7.31□□□□□ -1.24
TSKU-203ENST00000527881 STAB2Q8WWQ8 2551 aa7.3□□□□□ -1.24
TSKU-203ENST00000527881 LINC00483Q53H64 154 aa7.3□□□□□ -1.24
TSKU-203ENST00000527881 PSORS1C2Q9UIG4 136 aa7.29□□□□□ -1.24
TSKU-203ENST00000527881 ZNF861PO60384 105 aa7.28□□□□□ -1.24
TSKU-203ENST00000527881 FLG2Q5D862 2391 aaPredicted RBP7.26□□□□□ -1.25
TSKU-203ENST00000527881 KMT2BQ9UMN6 2715 aaPredicted RBP7.25□□□□□ -1.25
TSKU-203ENST00000527881 SPACA4Q8TDM5 124 aa7.23□□□□□ -1.25
TSKU-203ENST00000527881 IGLV7-43P04211 117 aa7.22□□□□□ -1.25
TSKU-203ENST00000527881 MGAM2Q2M2H8 2515 aa7.22□□□□□ -1.25
TSKU-203ENST00000527881 A0A0A0MQY5 61 aa7.21□□□□□ -1.25
TSKU-203ENST00000527881 IGLV5-52A0A0A0MRZ9 124 aa7.21□□□□□ -1.26
TSKU-203ENST00000527881 DNAH10Q8IVF4 4471 aa7.19□□□□□ -1.26
TSKU-203ENST00000527881 Q8N1X5 172 aa7.19□□□□□ -1.26
TSKU-203ENST00000527881 CRIPTQ9P021 101 aa7.19□□□□□ -1.26
TSKU-203ENST00000527881 NBDYA0A0U1RRE5 68 aa7.17□□□□□ -1.26
TSKU-203ENST00000527881 ROMO1P60602 79 aa7.16□□□□□ -1.26
TSKU-203ENST00000527881 KRTAP25-1Q3LHN0 102 aa7.16□□□□□ -1.26
TSKU-203ENST00000527881 TGP01266 2768 aa7.15□□□□□ -1.26
TSKU-203ENST00000527881 ANK2Q01484 3957 aa7.15□□□□□ -1.26
TSKU-203ENST00000527881 KRTAP24-1Q3LI83 254 aa7.14□□□□□ -1.27
TSKU-203ENST00000527881 APLNQ9ULZ1 77 aa7.14□□□□□ -1.27
TSKU-203ENST00000527881 ALMS1Q8TCU4 4167 aa7.1□□□□□ -1.27
TSKU-203ENST00000527881 SSBP3-AS1Q7Z2R9 100 aa7.1□□□□□ -1.27
TSKU-203ENST00000527881 LY6G6CO95867 125 aa7.09□□□□□ -1.27
TSKU-203ENST00000527881 LINC00304Q8N9R0 145 aa7.09□□□□□ -1.27
TSKU-203ENST00000527881 A8MUU9 505 aa7.09□□□□□ -1.28
TSKU-203ENST00000527881 J3QL48 77 aa7.08□□□□□ -1.28
TSKU-203ENST00000527881 A0A087WTM6 91 aa7.08□□□□□ -1.28
TSKU-203ENST00000527881 H0YAA0 97 aa7.07□□□□□ -1.28
TSKU-203ENST00000527881 LYSTQ99698 3801 aa7.07□□□□□ -1.28
TSKU-203ENST00000527881 Q6ZSA8 131 aa7.07□□□□□ -1.28
TSKU-203ENST00000527881 K7ERS5 55 aa7.07□□□□□ -1.28
TSKU-203ENST00000527881 DNAH1Q9P2D7 4330 aa7.06□□□□□ -1.28
TSKU-203ENST00000527881 A0A1B0GU33 70 aa7.05□□□□□ -1.28
TSKU-203ENST00000527881 Q6ZRN7 208 aaPredicted RBP7.05□□□□□ -1.28
TSKU-203ENST00000527881 TYMSOSQ8TAI1 123 aa7.02□□□□□ -1.29
TSKU-203ENST00000527881 MEGF8Q7Z7M0 2845 aa7.02□□□□□ -1.29
TSKU-203ENST00000527881 KRTAP16-1A8MUX0 517 aa6.99□□□□□ -1.29
TSKU-203ENST00000527881 SPINT4Q6UDR6 99 aa6.99□□□□□ -1.29
TSKU-203ENST00000527881 DMBT1Q9UGM3 2413 aaPredicted RBP6.98□□□□□ -1.29
TSKU-203ENST00000527881 DNAH9Q9NYC9 4486 aa6.97□□□□□ -1.29
TSKU-203ENST00000527881 H1FX-AS1Q4G0G2 97 aa6.95□□□□□ -1.3
TSKU-203ENST00000527881 FBN3Q75N90 2809 aa6.93□□□□□ -1.3
TSKU-203ENST00000527881 NUPR2A6NF83 97 aa6.93□□□□□ -1.3
TSKU-203ENST00000527881 P0C880 135 aa6.93□□□□□ -1.3
TSKU-203ENST00000527881 KRTAP13-2Q52LG2 175 aa6.93□□□□□ -1.3
TSKU-203ENST00000527881 HUWE1Q7Z6Z7 4374 aaKnown RBP6.9□□□□□ -1.3
TSKU-203ENST00000527881 FRAS1Q86XX4 4008 aa6.89□□□□□ -1.31
TSKU-203ENST00000527881 DNAH8Q96JB1 4490 aa6.84□□□□□ -1.31
TSKU-203ENST00000527881 A0A0D9SG42 100 aa6.83□□□□□ -1.32
TSKU-203ENST00000527881 NDUFAF8A1L188 74 aa6.82□□□□□ -1.32
TSKU-203ENST00000527881 C9orf92A6NGG3 77 aa6.82□□□□□ -1.32
TSKU-203ENST00000527881 COX6B2Q6YFQ2 88 aa6.8□□□□□ -1.32
TSKU-203ENST00000527881 DNAH7Q8WXX0 4024 aa6.79□□□□□ -1.32
TSKU-203ENST00000527881 CMYA5Q8N3K9 4069 aa6.79□□□□□ -1.32
TSKU-203ENST00000527881 RPL37P61927 97 aaKnown RBP6.74□□□□□ -1.33
TSKU-203ENST00000527881 C10orf95Q9H7T3 257 aa6.74□□□□□ -1.33
TSKU-203ENST00000527881 KRTAP10-2P60368 255 aa6.72□□□□□ -1.33
TSKU-203ENST00000527881 KRTAP3-1Q9BYR8 98 aa6.72□□□□□ -1.33
TSKU-203ENST00000527881 DNAH17Q9UFH2 4485 aa6.7□□□□□ -1.34
TSKU-203ENST00000527881 TPRXLQ17RH7 258 aa6.7□□□□□ -1.34
TSKU-203ENST00000527881 C20orf166-AS1Q96NR2 134 aa6.7□□□□□ -1.34
TSKU-203ENST00000527881 DNAH3Q8TD57 4116 aa6.7□□□□□ -1.34
TSKU-203ENST00000527881 KRTAP1-4P0C5Y4 121 aa6.7□□□□□ -1.34
TSKU-203ENST00000527881 PLECQ15149 4684 aaKnown RBP6.69□□□□□ -1.34
TSKU-203ENST00000527881 KRTAP10-1P60331 282 aa6.63□□□□□ -1.35
TSKU-203ENST00000527881 HECTD4Q9Y4D8 3996 aa6.62□□□□□ -1.35
TSKU-203ENST00000527881 KRTAP13-4Q3LI77 160 aa6.57□□□□□ -1.36
TSKU-203ENST00000527881 KRTAP15-1Q3LI76 137 aa6.56□□□□□ -1.36
TSKU-203ENST00000527881 KMT2AQ03164 3969 aa6.53□□□□□ -1.36
TSKU-203ENST00000527881 VPS13DQ5THJ4 4388 aa6.51□□□□□ -1.37
TSKU-203ENST00000527881 KRTAP10-6P60371 365 aaPredicted RBP6.5□□□□□ -1.37
TSKU-203ENST00000527881 S4R3F8 94 aa6.5□□□□□ -1.37
TSKU-203ENST00000527881 STARD9Q9P2P6 4700 aa6.5□□□□□ -1.37
TSKU-203ENST00000527881 DNAH2Q9P225 4427 aa6.49□□□□□ -1.37
TSKU-203ENST00000527881 SMR3BP02814 79 aaPredicted RBP6.47□□□□□ -1.37
TSKU-203ENST00000527881 DNAH6Q9C0G6 4158 aa6.47□□□□□ -1.37
TSKU-203ENST00000527881 DNAH11Q96DT5 4516 aa6.46□□□□□ -1.37
TSKU-203ENST00000527881 RPS29P62273 56 aaKnown RBP6.44□□□□□ -1.38
TSKU-203ENST00000527881 DYNC2H1Q8NCM8 4307 aaKnown RBP6.44□□□□□ -1.38
TSKU-203ENST00000527881 KRTAP12-2P59991 146 aa6.43□□□□□ -1.38
TSKU-203ENST00000527881 LRP1BQ9NZR2 4599 aa6.43□□□□□ -1.38
TSKU-203ENST00000527881 KRTAP3-2Q9BYR7 98 aa6.39□□□□□ -1.39
TSKU-203ENST00000527881 KRTAP3-3Q9BYR6 98 aa6.37□□□□□ -1.39
TSKU-203ENST00000527881 LUZP6Q538Z0 58 aa6.36□□□□□ -1.39
TSKU-203ENST00000527881 VPS13BQ7Z7G8 4022 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms