RNA–Protein interactions for RNA: ENST00000527224.1

PACS1-205, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 3,024 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-205ENST00000527224 SPINK6Q6UWN8 80 aa11.09□□□□□ -0.63
PACS1-205ENST00000527224 LYSTQ99698 3801 aa11.08□□□□□ -0.64
PACS1-205ENST00000527224 ALMS1Q8TCU4 4167 aa11.06□□□□□ -0.64
PACS1-205ENST00000527224 COL6A5A8TX70 2615 aa11.06□□□□□ -0.64
PACS1-205ENST00000527224 KRTAP10-11P60412 298 aa11.06□□□□□ -0.64
PACS1-205ENST00000527224 DNAH1Q9P2D7 4330 aa11.02□□□□□ -0.64
PACS1-205ENST00000527224 ANAPC11Q9NYG5 84 aa11.02□□□□□ -0.65
PACS1-205ENST00000527224 ZNF861PO60384 105 aa11□□□□□ -0.65
PACS1-205ENST00000527224 KRTAP24-1Q3LI83 254 aa10.99□□□□□ -0.65
PACS1-205ENST00000527224 DMAC1Q96GE9 116 aa10.99□□□□□ -0.65
PACS1-205ENST00000527224 FLG2Q5D862 2391 aaPredicted RBP10.97□□□□□ -0.65
PACS1-205ENST00000527224 KRTAP13-3Q3SY46 172 aa10.95□□□□□ -0.66
PACS1-205ENST00000527224 KRTAP1-5Q9BYS1 174 aa10.91□□□□□ -0.66
PACS1-205ENST00000527224 PANO1I0J062 215 aa10.9□□□□□ -0.66
PACS1-205ENST00000527224 ROMO1P60602 79 aa10.89□□□□□ -0.67
PACS1-205ENST00000527224 MGAM2Q2M2H8 2515 aa10.89□□□□□ -0.67
PACS1-205ENST00000527224 CRIPTQ9P021 101 aa10.86□□□□□ -0.67
PACS1-205ENST00000527224 SPINK1P00995 79 aa10.85□□□□□ -0.67
PACS1-205ENST00000527224 KRTAP13-1Q8IUC0 172 aa10.83□□□□□ -0.68
PACS1-205ENST00000527224 DNAH9Q9NYC9 4486 aa10.82□□□□□ -0.68
PACS1-205ENST00000527224 KRTAP25-1Q3LHN0 102 aa10.79□□□□□ -0.68
PACS1-205ENST00000527224 WWC2-AS2Q96NR7 200 aa10.78□□□□□ -0.68
PACS1-205ENST00000527224 FRAS1Q86XX4 4008 aa10.77□□□□□ -0.69
PACS1-205ENST00000527224 IGLV7-43P04211 117 aa10.76□□□□□ -0.69
PACS1-205ENST00000527224 IGKV2D-30A0A075B6S6 120 aa10.75□□□□□ -0.69
PACS1-205ENST00000527224 IGKV2-30P06310 120 aa10.75□□□□□ -0.69
PACS1-205ENST00000527224 MEGF8Q7Z7M0 2845 aa10.74□□□□□ -0.69
PACS1-205ENST00000527224 CMYA5Q8N3K9 4069 aa10.74□□□□□ -0.69
PACS1-205ENST00000527224 CIRBP-AS1Q8TBR5 109 aa10.71□□□□□ -0.69
PACS1-205ENST00000527224 IGLV5-52A0A0A0MRZ9 124 aa10.71□□□□□ -0.69
PACS1-205ENST00000527224 STAB2Q8WWQ8 2551 aa10.7□□□□□ -0.7
PACS1-205ENST00000527224 P0C880 135 aa10.7□□□□□ -0.7
PACS1-205ENST00000527224 LINC00304Q8N9R0 145 aa10.7□□□□□ -0.7
PACS1-205ENST00000527224 A8MUU9 505 aa10.68□□□□□ -0.7
PACS1-205ENST00000527224 LINC00483Q53H64 154 aa10.68□□□□□ -0.7
PACS1-205ENST00000527224 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.68□□□□□ -0.7
PACS1-205ENST00000527224 FAM229AH3BQW9 127 aa10.66□□□□□ -0.7
PACS1-205ENST00000527224 C14orf177Q52M58 125 aa10.66□□□□□ -0.7
PACS1-205ENST00000527224 TGP01266 2768 aa10.65□□□□□ -0.7
PACS1-205ENST00000527224 H0YAA0 97 aa10.64□□□□□ -0.71
PACS1-205ENST00000527224 DNAH8Q96JB1 4490 aa10.6□□□□□ -0.71
PACS1-205ENST00000527224 Q8N1X5 172 aa10.6□□□□□ -0.71
PACS1-205ENST00000527224 Q6ZSA8 131 aa10.6□□□□□ -0.71
PACS1-205ENST00000527224 UBE2DNLQ8IWF7 75 aa10.59□□□□□ -0.71
PACS1-205ENST00000527224 PSORS1C2Q9UIG4 136 aa10.59□□□□□ -0.71
PACS1-205ENST00000527224 DNAH7Q8WXX0 4024 aa10.54□□□□□ -0.72
PACS1-205ENST00000527224 SSBP3-AS1Q7Z2R9 100 aa10.54□□□□□ -0.72
PACS1-205ENST00000527224 HUWE1Q7Z6Z7 4374 aaKnown RBP10.53□□□□□ -0.72
PACS1-205ENST00000527224 DNAH3Q8TD57 4116 aa10.53□□□□□ -0.72
PACS1-205ENST00000527224 TYMSOSQ8TAI1 123 aa10.51□□□□□ -0.73
PACS1-205ENST00000527224 LY6G6CO95867 125 aa10.49□□□□□ -0.73
PACS1-205ENST00000527224 SPACA4Q8TDM5 124 aa10.49□□□□□ -0.73
PACS1-205ENST00000527224 DNAH17Q9UFH2 4485 aa10.48□□□□□ -0.73
PACS1-205ENST00000527224 KRTAP16-1A8MUX0 517 aa10.48□□□□□ -0.73
PACS1-205ENST00000527224 A0A1B0GU33 70 aa10.4□□□□□ -0.74
PACS1-205ENST00000527224 SPINT4Q6UDR6 99 aa10.39□□□□□ -0.75
PACS1-205ENST00000527224 DMBT1Q9UGM3 2413 aaPredicted RBP10.36□□□□□ -0.75
PACS1-205ENST00000527224 NDUFAF8A1L188 74 aa10.35□□□□□ -0.75
PACS1-205ENST00000527224 APLNQ9ULZ1 77 aa10.31□□□□□ -0.76
PACS1-205ENST00000527224 FBN3Q75N90 2809 aa10.31□□□□□ -0.76
PACS1-205ENST00000527224 H1FX-AS1Q4G0G2 97 aa10.28□□□□□ -0.76
PACS1-205ENST00000527224 NBDYA0A0U1RRE5 68 aa10.26□□□□□ -0.77
PACS1-205ENST00000527224 Q6ZRN7 208 aaPredicted RBP10.26□□□□□ -0.77
PACS1-205ENST00000527224 PLECQ15149 4684 aaKnown RBP10.23□□□□□ -0.77
PACS1-205ENST00000527224 A0A087WTM6 91 aa10.22□□□□□ -0.77
PACS1-205ENST00000527224 K7ERS5 55 aa10.22□□□□□ -0.77
PACS1-205ENST00000527224 HECTD4Q9Y4D8 3996 aa10.2□□□□□ -0.78
PACS1-205ENST00000527224 C10orf95Q9H7T3 257 aa10.2□□□□□ -0.78
PACS1-205ENST00000527224 KMT2AQ03164 3969 aa10.19□□□□□ -0.78
PACS1-205ENST00000527224 TPRXLQ17RH7 258 aa10.17□□□□□ -0.78
PACS1-205ENST00000527224 KRTAP13-2Q52LG2 175 aa10.16□□□□□ -0.78
PACS1-205ENST00000527224 C20orf166-AS1Q96NR2 134 aa10.16□□□□□ -0.78
PACS1-205ENST00000527224 VPS13DQ5THJ4 4388 aa10.16□□□□□ -0.78
PACS1-205ENST00000527224 A0A0A0MQY5 61 aa10.12□□□□□ -0.79
PACS1-205ENST00000527224 NUPR2A6NF83 97 aa10.12□□□□□ -0.79
PACS1-205ENST00000527224 COX6B2Q6YFQ2 88 aa10.11□□□□□ -0.79
PACS1-205ENST00000527224 PRKDCP78527 4128 aaKnown RBP10.1□□□□□ -0.79
PACS1-205ENST00000527224 STARD9Q9P2P6 4700 aa10.1□□□□□ -0.79
PACS1-205ENST00000527224 A0A0D9SG42 100 aa10.07□□□□□ -0.8
PACS1-205ENST00000527224 KRTAP3-1Q9BYR8 98 aa10.07□□□□□ -0.8
PACS1-205ENST00000527224 KRTAP15-1Q3LI76 137 aa10.03□□□□□ -0.8
PACS1-205ENST00000527224 DNAH2Q9P225 4427 aa9.99□□□□□ -0.81
PACS1-205ENST00000527224 DNAH6Q9C0G6 4158 aa9.98□□□□□ -0.81
PACS1-205ENST00000527224 DNHD1Q96M86 4753 aa9.97□□□□□ -0.81
PACS1-205ENST00000527224 DYNC2H1Q8NCM8 4307 aaKnown RBP9.96□□□□□ -0.81
PACS1-205ENST00000527224 DNAH11Q96DT5 4516 aa9.94□□□□□ -0.82
PACS1-205ENST00000527224 RPL37P61927 97 aaKnown RBP9.93□□□□□ -0.82
PACS1-205ENST00000527224 C9orf92A6NGG3 77 aa9.9□□□□□ -0.82
PACS1-205ENST00000527224 KRTAP13-4Q3LI77 160 aa9.9□□□□□ -0.83
PACS1-205ENST00000527224 LRP1BQ9NZR2 4599 aa9.85□□□□□ -0.83
PACS1-205ENST00000527224 KRTAP1-4P0C5Y4 121 aa9.8□□□□□ -0.84
PACS1-205ENST00000527224 KRTAP10-2P60368 255 aa9.74□□□□□ -0.85
PACS1-205ENST00000527224 KRTAP10-6P60371 365 aaPredicted RBP9.73□□□□□ -0.85
PACS1-205ENST00000527224 DNAH5Q8TE73 4624 aa9.7□□□□□ -0.86
PACS1-205ENST00000527224 VPS13BQ7Z7G8 4022 aa9.67□□□□□ -0.86
PACS1-205ENST00000527224 KRTAP12-2P59991 146 aa9.64□□□□□ -0.87
PACS1-205ENST00000527224 S4R3F8 94 aa9.63□□□□□ -0.87
PACS1-205ENST00000527224 LUZP6Q538Z0 58 aa9.62□□□□□ -0.87
PACS1-205ENST00000527224 HYDINQ4G0P3 5121 aa9.62□□□□□ -0.87
PACS1-205ENST00000527224 FAT2Q9NYQ8 4349 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms