RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 MYCBP2O75592 4640 aa7.04□□□□□ -1.28
VPS11-202ENST00000526829 KRTAP16-1A8MUX0 517 aa7.04□□□□□ -1.28
VPS11-202ENST00000526829 SMR3BP02814 79 aaPredicted RBP7.03□□□□□ -1.28
VPS11-202ENST00000526829 HIGD2BQ4VC39 106 aa7.02□□□□□ -1.29
VPS11-202ENST00000526829 A0A1W2PNM2 257 aa7.02□□□□□ -1.29
VPS11-202ENST00000526829 SRRM2Q9UQ35 2752 aaKnown RBP7.01□□□□□ -1.29
VPS11-202ENST00000526829 FLG2Q5D862 2391 aaPredicted RBP7.01□□□□□ -1.29
VPS11-202ENST00000526829 CNBPP62633 177 aaKnown RBP7.01□□□□□ -1.29
VPS11-202ENST00000526829 CSAG1Q6PB30 78 aa6.99□□□□□ -1.29
VPS11-202ENST00000526829 C6orf48Q9UBA6 75 aa6.99□□□□□ -1.29
VPS11-202ENST00000526829 SMIM29Q86T20 159 aa6.98□□□□□ -1.29
VPS11-202ENST00000526829 PRR34Q9NV39 138 aa6.97□□□□□ -1.29
VPS11-202ENST00000526829 KLK12Q9UKR0 248 aa6.97□□□□□ -1.29
VPS11-202ENST00000526829 IGLV9-49A0A0B4J1Y8 123 aa6.97□□□□□ -1.29
VPS11-202ENST00000526829 SPINK7P58062 85 aa6.97□□□□□ -1.29
VPS11-202ENST00000526829 IGLV5-48A0A075B6I7 105 aa6.96□□□□□ -1.3
VPS11-202ENST00000526829 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.96□□□□□ -1.3
VPS11-202ENST00000526829 ETDCA0A1B0GVM5 59 aa6.95□□□□□ -1.3
VPS11-202ENST00000526829 IGKV2D-24A0A075B6R9 120 aa6.95□□□□□ -1.3
VPS11-202ENST00000526829 PRR4Q16378 134 aa6.95□□□□□ -1.3
VPS11-202ENST00000526829 Q6ZSA8 131 aa6.93□□□□□ -1.3
VPS11-202ENST00000526829 MIR22HGQ0VDD5 57 aa6.92□□□□□ -1.3
VPS11-202ENST00000526829 C14orf177Q52M58 125 aa6.92□□□□□ -1.3
VPS11-202ENST00000526829 SPAG11AQ6PDA7 123 aa6.92□□□□□ -1.3
VPS11-202ENST00000526829 Q8N377 158 aa6.92□□□□□ -1.3
VPS11-202ENST00000526829 CAMK2N2Q96S95 79 aa6.9□□□□□ -1.3
VPS11-202ENST00000526829 KCNQ1DNQ9H478 68 aa6.89□□□□□ -1.31
VPS11-202ENST00000526829 KRTAP29-1A8MX34 341 aaPredicted RBP6.88□□□□□ -1.31
VPS11-202ENST00000526829 Q8NBF4 154 aa6.88□□□□□ -1.31
VPS11-202ENST00000526829 SPRR4Q96PI1 79 aa6.88□□□□□ -1.31
VPS11-202ENST00000526829 H3BPC8 53 aa6.88□□□□□ -1.31
VPS11-202ENST00000526829 DSCR10P59022 87 aa6.88□□□□□ -1.31
VPS11-202ENST00000526829 COA5Q86WW8 74 aa6.88□□□□□ -1.31
VPS11-202ENST00000526829 DEFB105AQ8NG35 78 aa6.87□□□□□ -1.31
VPS11-202ENST00000526829 DHRS4-AS1Q9P1J3 65 aa6.87□□□□□ -1.31
VPS11-202ENST00000526829 CHTF8P0CG12 524 aa6.86□□□□□ -1.31
VPS11-202ENST00000526829 FAT3Q8TDW7 4589 aa6.86□□□□□ -1.31
VPS11-202ENST00000526829 LRP1Q07954 4544 aaKnown RBP6.86□□□□□ -1.31
VPS11-202ENST00000526829 H0Y9P7 68 aa6.86□□□□□ -1.31
VPS11-202ENST00000526829 P0C880 135 aa6.86□□□□□ -1.31
VPS11-202ENST00000526829 C1orf137Q5JT78 98 aa6.86□□□□□ -1.31
VPS11-202ENST00000526829 REG3GQ6UW15 175 aa6.86□□□□□ -1.31
VPS11-202ENST00000526829 HMCN2Q8NDA2 5059 aa6.85□□□□□ -1.31
VPS11-202ENST00000526829 ST20-AS1Q8NBB2 130 aa6.85□□□□□ -1.31
VPS11-202ENST00000526829 PKHD1L1Q86WI1 4243 aa6.84□□□□□ -1.31
VPS11-202ENST00000526829 KRTAP10-4P60372 401 aaPredicted RBP6.84□□□□□ -1.31
VPS11-202ENST00000526829 K7EQZ3 153 aa6.84□□□□□ -1.32
VPS11-202ENST00000526829 KRTAP26-1Q6PEX3 210 aa6.84□□□□□ -1.32
VPS11-202ENST00000526829 CIRBP-AS1Q8TBR5 109 aa6.83□□□□□ -1.32
VPS11-202ENST00000526829 Q6ZRX8 168 aa6.82□□□□□ -1.32
VPS11-202ENST00000526829 C15orf56Q8N910 161 aa6.82□□□□□ -1.32
VPS11-202ENST00000526829 C7orf33Q8WU49 177 aa6.81□□□□□ -1.32
VPS11-202ENST00000526829 RPL37AP61513 92 aaKnown RBP6.8□□□□□ -1.32
VPS11-202ENST00000526829 KRTAP4-16G5E9R7 235 aaPredicted RBP6.79□□□□□ -1.32
VPS11-202ENST00000526829 SPRR1AP35321 89 aa6.78□□□□□ -1.32
VPS11-202ENST00000526829 SPATA8Q6RVD6 105 aa6.78□□□□□ -1.32
VPS11-202ENST00000526829 C9orf163Q8N9P6 203 aa6.78□□□□□ -1.32
VPS11-202ENST00000526829 IGLV5-37A0A075B6J1 123 aa6.77□□□□□ -1.33
VPS11-202ENST00000526829 UBR4Q5T4S7 5183 aa6.76□□□□□ -1.33
VPS11-202ENST00000526829 A8MWP4 228 aa6.76□□□□□ -1.33
VPS11-202ENST00000526829 KRTAP25-1Q3LHN0 102 aa6.76□□□□□ -1.33
VPS11-202ENST00000526829 LUZP6Q538Z0 58 aa6.76□□□□□ -1.33
VPS11-202ENST00000526829 C8orf17Q9NRJ1 99 aa6.76□□□□□ -1.33
VPS11-202ENST00000526829 IGLV7-46A0A075B6I9 117 aa6.75□□□□□ -1.33
VPS11-202ENST00000526829 A0A087WSZ3 146 aa6.75□□□□□ -1.33
VPS11-202ENST00000526829 TLX1NBP0CAT3 122 aa6.75□□□□□ -1.33
VPS11-202ENST00000526829 LINC00483Q53H64 154 aa6.75□□□□□ -1.33
VPS11-202ENST00000526829 IGLV1-50A0A075B6I6 118 aa6.75□□□□□ -1.33
VPS11-202ENST00000526829 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.73□□□□□ -1.33
VPS11-202ENST00000526829 WFDC13Q8IUB5 93 aa6.72□□□□□ -1.33
VPS11-202ENST00000526829 C20orf166-AS1Q96NR2 134 aa6.72□□□□□ -1.33
VPS11-202ENST00000526829 K7ERS5 55 aa6.71□□□□□ -1.33
VPS11-202ENST00000526829 RPL37AP8A6NKH3 93 aa6.71□□□□□ -1.34
VPS11-202ENST00000526829 IGLV8-61A0A075B6I0 122 aa6.69□□□□□ -1.34
VPS11-202ENST00000526829 PANO1I0J062 215 aa6.69□□□□□ -1.34
VPS11-202ENST00000526829 IGFL1Q6UW32 110 aa6.69□□□□□ -1.34
VPS11-202ENST00000526829 MT1HL1P0DM35 61 aa6.68□□□□□ -1.34
VPS11-202ENST00000526829 DEFB116Q30KQ4 102 aa6.68□□□□□ -1.34
VPS11-202ENST00000526829 ZNF861PO60384 105 aa6.67□□□□□ -1.34
VPS11-202ENST00000526829 SPACA4Q8TDM5 124 aa6.66□□□□□ -1.34
VPS11-202ENST00000526829 FAM168BA1KXE4 195 aa6.65□□□□□ -1.34
VPS11-202ENST00000526829 IGKV2-24A0A0C4DH68 120 aa6.64□□□□□ -1.35
VPS11-202ENST00000526829 KRTAP7-1Q8IUC3 87 aa6.64□□□□□ -1.35
VPS11-202ENST00000526829 TNXBP22105 4242 aa6.64□□□□□ -1.35
VPS11-202ENST00000526829 UQCR11O14957 56 aa6.63□□□□□ -1.35
VPS11-202ENST00000526829 A0A0G2JQZ4 141 aa6.61□□□□□ -1.35
VPS11-202ENST00000526829 A0A1W2PNN7 141 aa6.61□□□□□ -1.35
VPS11-202ENST00000526829 NDUFAF8A1L188 74 aa6.61□□□□□ -1.35
VPS11-202ENST00000526829 DMAC1Q96GE9 116 aa6.59□□□□□ -1.35
VPS11-202ENST00000526829 LINC00472Q9H8W2 130 aa6.58□□□□□ -1.36
VPS11-202ENST00000526829 A0A096LNI7 61 aa6.58□□□□□ -1.36
VPS11-202ENST00000526829 LRP2P98164 4655 aa6.57□□□□□ -1.36
VPS11-202ENST00000526829 A8MUU9 505 aa6.57□□□□□ -1.36
VPS11-202ENST00000526829 SPINK6Q6UWN8 80 aa6.57□□□□□ -1.36
VPS11-202ENST00000526829 MMP24-AS1A0A0U1RRL7 71 aa6.56□□□□□ -1.36
VPS11-202ENST00000526829 TP53AIP1Q9HCN2 124 aa6.55□□□□□ -1.36
VPS11-202ENST00000526829 SPRR1BP22528 89 aa6.55□□□□□ -1.36
VPS11-202ENST00000526829 RNF213Q63HN8 5207 aa6.53□□□□□ -1.36
VPS11-202ENST00000526829 HRES1P13985 223 aa6.53□□□□□ -1.36
VPS11-202ENST00000526829 PRLHP81277 87 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms