RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 IGLV5-48A0A075B6I7 105 aa3.25□□□□□ -1.89
CD44-218ENST00000525469 IGLV5-37A0A075B6J1 123 aa3.25□□□□□ -1.89
CD44-218ENST00000525469 LINC00959A0A1B0GUT2 108 aa3.25□□□□□ -1.89
CD44-218ENST00000525469 H0Y9J4 135 aa3.25□□□□□ -1.89
CD44-218ENST00000525469 HTN3P15516 51 aa3.25□□□□□ -1.89
CD44-218ENST00000525469 IGLV4-60A0A075B6I1 120 aa3.24□□□□□ -1.89
CD44-218ENST00000525469 SPART-AS1P0CW21 52 aa3.24□□□□□ -1.89
CD44-218ENST00000525469 CNBPP62633 177 aaKnown RBP3.24□□□□□ -1.89
CD44-218ENST00000525469 MOBPQ13875 183 aa3.24□□□□□ -1.89
CD44-218ENST00000525469 KRTAP2-2Q9BYT5 123 aa3.24□□□□□ -1.89
CD44-218ENST00000525469 DHRS4-AS1Q9P1J3 65 aa3.24□□□□□ -1.89
CD44-218ENST00000525469 VPS13BQ7Z7G8 4022 aa3.24□□□□□ -1.89
CD44-218ENST00000525469 IGKV3-7A0A075B6H7 116 aa3.23□□□□□ -1.89
CD44-218ENST00000525469 IGLV7-46A0A075B6I9 117 aa3.23□□□□□ -1.89
CD44-218ENST00000525469 LRCOL1A6NCL2 159 aa3.23□□□□□ -1.89
CD44-218ENST00000525469 C16orf74Q96GX8 76 aa3.23□□□□□ -1.89
CD44-218ENST00000525469 SPRR4Q96PI1 79 aa3.23□□□□□ -1.89
CD44-218ENST00000525469 TP53AIP1Q9HCN2 124 aa3.23□□□□□ -1.89
CD44-218ENST00000525469 XAGE1AQ9HD64 81 aa3.23□□□□□ -1.89
CD44-218ENST00000525469 RNF213Q63HN8 5207 aa3.23□□□□□ -1.89
CD44-218ENST00000525469 TRGV1A0A0A0MS02 117 aa3.22□□□□□ -1.89
CD44-218ENST00000525469 IGKV3-20P01619 116 aa3.22□□□□□ -1.89
CD44-218ENST00000525469 DNAH5Q8TE73 4624 aa3.22□□□□□ -1.89
CD44-218ENST00000525469 TRGV4A0A0C4DH28 118 aa3.21□□□□□ -1.9
CD44-218ENST00000525469 RPL37AP8A6NKH3 93 aa3.21□□□□□ -1.9
CD44-218ENST00000525469 H0Y9P7 68 aa3.21□□□□□ -1.9
CD44-218ENST00000525469 HTN1P15515 57 aa3.21□□□□□ -1.9
CD44-218ENST00000525469 LINC00313P59037 77 aa3.21□□□□□ -1.9
CD44-218ENST00000525469 DEFB131AP59861 70 aa3.21□□□□□ -1.9
CD44-218ENST00000525469 COA5Q86WW8 74 aa3.21□□□□□ -1.9
CD44-218ENST00000525469 Q8NBF4 154 aa3.21□□□□□ -1.9
CD44-218ENST00000525469 PLAC8Q9NZF1 115 aa3.21□□□□□ -1.9
CD44-218ENST00000525469 DEFB1P60022 68 aa3.2□□□□□ -1.9
CD44-218ENST00000525469 KRTAP10-1P60331 282 aa3.2□□□□□ -1.9
CD44-218ENST00000525469 HMCN2Q8NDA2 5059 aa3.19□□□□□ -1.9
CD44-218ENST00000525469 C9orf163Q8N9P6 203 aa3.19□□□□□ -1.9
CD44-218ENST00000525469 IGKV2D-24A0A075B6R9 120 aa3.18□□□□□ -1.9
CD44-218ENST00000525469 GIG44P09565 113 aaPredicted RBP3.18□□□□□ -1.9
CD44-218ENST00000525469 PRR3P79522 188 aaKnown RBP3.18□□□□□ -1.9
CD44-218ENST00000525469 KRTAP10-6P60371 365 aaPredicted RBP3.17□□□□□ -1.9
CD44-218ENST00000525469 C1orf137Q5JT78 98 aa3.17□□□□□ -1.9
CD44-218ENST00000525469 SPAG11AQ6PDA7 123 aa3.17□□□□□ -1.9
CD44-218ENST00000525469 LINC00612Q8N6U2 182 aa3.17□□□□□ -1.9
CD44-218ENST00000525469 Q8N9L7 120 aa3.17□□□□□ -1.9
CD44-218ENST00000525469 CSNK1G2-AS1Q8NCQ2 148 aa3.17□□□□□ -1.9
CD44-218ENST00000525469 IGHV6-1A0A0B4J1U7 121 aa3.16□□□□□ -1.9
CD44-218ENST00000525469 IGKV3OR2-268A0A0C4DH90 116 aa3.16□□□□□ -1.9
CD44-218ENST00000525469 DSCR10P59022 87 aa3.16□□□□□ -1.9
CD44-218ENST00000525469 KLK12Q9UKR0 248 aa3.16□□□□□ -1.9
CD44-218ENST00000525469 FAT1Q14517 4588 aa3.15□□□□□ -1.9
CD44-218ENST00000525469 CHCHD10Q8WYQ3 142 aaPredicted RBP3.15□□□□□ -1.91
CD44-218ENST00000525469 A0A087WTM6 91 aa3.14□□□□□ -1.91
CD44-218ENST00000525469 K7EQZ3 153 aa3.14□□□□□ -1.91
CD44-218ENST00000525469 DNAH10OSP0CZ25 163 aa3.14□□□□□ -1.91
CD44-218ENST00000525469 KRTAP10-7P60409 375 aaPredicted RBP3.14□□□□□ -1.91
CD44-218ENST00000525469 REG3AQ06141 175 aa3.14□□□□□ -1.91
CD44-218ENST00000525469 PRR4Q16378 134 aa3.14□□□□□ -1.91
CD44-218ENST00000525469 ST20-AS1Q8NBB2 130 aa3.14□□□□□ -1.91
CD44-218ENST00000525469 PRO0255Q9UI72 69 aa3.14□□□□□ -1.91
CD44-218ENST00000525469 UQCR11O14957 56 aa3.13□□□□□ -1.91
CD44-218ENST00000525469 DEFB130BP0DP73 79 aa3.13□□□□□ -1.91
CD44-218ENST00000525469 DEFB130AP0DP74 79 aa3.13□□□□□ -1.91
CD44-218ENST00000525469 SPATA8Q6RVD6 105 aa3.13□□□□□ -1.91
CD44-218ENST00000525469 Q6ZRN7 208 aaPredicted RBP3.13□□□□□ -1.91
CD44-218ENST00000525469 NOP10Q9NPE3 64 aaKnown RBP3.13□□□□□ -1.91
CD44-218ENST00000525469 A8MWP4 228 aa3.12□□□□□ -1.91
CD44-218ENST00000525469 ACYP2P14621 99 aa3.12□□□□□ -1.91
CD44-218ENST00000525469 IGLV8-61A0A075B6I0 122 aa3.11□□□□□ -1.91
CD44-218ENST00000525469 A0A1W2PNM2 257 aa3.11□□□□□ -1.91
CD44-218ENST00000525469 ANGP03950 147 aaKnown RBP3.11□□□□□ -1.91
CD44-218ENST00000525469 Q6ZRX8 168 aa3.11□□□□□ -1.91
CD44-218ENST00000525469 Q8N377 158 aa3.11□□□□□ -1.91
CD44-218ENST00000525469 A8MU10 97 aa3.1□□□□□ -1.91
CD44-218ENST00000525469 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
CD44-218ENST00000525469 ZNF706Q9Y5V0 76 aaPredicted RBP3.1□□□□□ -1.91
CD44-218ENST00000525469 LRP2P98164 4655 aa3.09□□□□□ -1.91
CD44-218ENST00000525469 A0A1B0GU69 56 aa3.09□□□□□ -1.91
CD44-218ENST00000525469 SPINK7P58062 85 aa3.09□□□□□ -1.91
CD44-218ENST00000525469 LELP1Q5T871 98 aa3.09□□□□□ -1.91
CD44-218ENST00000525469 UNQ6190/PRO20217Q6UXQ8 127 aa3.09□□□□□ -1.91
CD44-218ENST00000525469 WFDC10BQ8IUB3 73 aa3.09□□□□□ -1.91
CD44-218ENST00000525469 WFDC13Q8IUB5 93 aa3.09□□□□□ -1.91
CD44-218ENST00000525469 CAMK2N2Q96S95 79 aa3.09□□□□□ -1.91
CD44-218ENST00000525469 PRR34Q9NV39 138 aa3.09□□□□□ -1.91
CD44-218ENST00000525469 LRP1Q07954 4544 aaKnown RBP3.09□□□□□ -1.92
CD44-218ENST00000525469 TLX1NBP0CAT3 122 aa3.08□□□□□ -1.92
CD44-218ENST00000525469 MIR22HGQ0VDD5 57 aa3.08□□□□□ -1.92
CD44-218ENST00000525469 PRAC1Q96KF2 57 aa3.08□□□□□ -1.92
CD44-218ENST00000525469 SPRR1AP35321 89 aa3.07□□□□□ -1.92
CD44-218ENST00000525469 RPL37AP61513 92 aaKnown RBP3.07□□□□□ -1.92
CD44-218ENST00000525469 REG3GQ6UW15 175 aa3.07□□□□□ -1.92
CD44-218ENST00000525469 DEFB105AQ8NG35 78 aa3.07□□□□□ -1.92
CD44-218ENST00000525469 C6orf48Q9UBA6 75 aa3.07□□□□□ -1.92
CD44-218ENST00000525469 PKHD1L1Q86WI1 4243 aa3.06□□□□□ -1.92
CD44-218ENST00000525469 H3BNG1 76 aa3.06□□□□□ -1.92
CD44-218ENST00000525469 MT1HL1P0DM35 61 aa3.06□□□□□ -1.92
CD44-218ENST00000525469 ROMO1P60602 79 aa3.06□□□□□ -1.92
CD44-218ENST00000525469 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
CD44-218ENST00000525469 Q6ZSA8 131 aa3.06□□□□□ -1.92
CD44-218ENST00000525469 Q8NDZ9 215 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms