RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 GVQW2A0A096LPI5 108 aaPredicted RBP2.11□□□□□ -2.07
CD44-213ENST00000525209 KRTAP12-2P59991 146 aa2.11□□□□□ -2.07
CD44-213ENST00000525209 Q6ZRX8 168 aa2.11□□□□□ -2.07
CD44-213ENST00000525209 PLAC4Q8WY50 150 aa2.11□□□□□ -2.07
CD44-213ENST00000525209 GAFA1Q96PS6 74 aa2.11□□□□□ -2.07
CD44-213ENST00000525209 TNCP24821 2201 aa2.1□□□□□ -2.07
CD44-213ENST00000525209 A0A1B0GU69 56 aa2.1□□□□□ -2.07
CD44-213ENST00000525209 LINC00959A0A1B0GUT2 108 aa2.1□□□□□ -2.07
CD44-213ENST00000525209 RPS27P42677 84 aaKnown RBP2.1□□□□□ -2.07
CD44-213ENST00000525209 PRKDCP78527 4128 aaKnown RBP2.1□□□□□ -2.07
CD44-213ENST00000525209 M0R1W7 72 aa2.09□□□□□ -2.07
CD44-213ENST00000525209 KRTAP5-9P26371 169 aa2.09□□□□□ -2.07
CD44-213ENST00000525209 KRTAP5-4Q6L8H1 288 aa2.09□□□□□ -2.07
CD44-213ENST00000525209 CMYA5Q8N3K9 4069 aa2.08□□□□□ -2.08
CD44-213ENST00000525209 NCR3O14931 201 aa2.08□□□□□ -2.08
CD44-213ENST00000525209 KRTAP10-1P60331 282 aa2.08□□□□□ -2.08
CD44-213ENST00000525209 ENHOQ6UWT2 76 aa2.08□□□□□ -2.08
CD44-213ENST00000525209 LINC00575Q6W349 94 aa2.08□□□□□ -2.08
CD44-213ENST00000525209 TTTY10Q9BZA0 68 aa2.08□□□□□ -2.08
CD44-213ENST00000525209 STAB2Q8WWQ8 2551 aa2.07□□□□□ -2.08
CD44-213ENST00000525209 TENM3Q9P273 2699 aa2.07□□□□□ -2.08
CD44-213ENST00000525209 UBE2DNLQ8IWF7 75 aa2.07□□□□□ -2.08
CD44-213ENST00000525209 LEAP2Q969E1 77 aa2.07□□□□□ -2.08
CD44-213ENST00000525209 A0A1B0GVY2 172 aa2.06□□□□□ -2.08
CD44-213ENST00000525209 HAMPP81172 84 aa2.06□□□□□ -2.08
CD44-213ENST00000525209 SPINK13Q1W4C9 94 aa2.06□□□□□ -2.08
CD44-213ENST00000525209 KAAG1Q9UBP8 84 aa2.06□□□□□ -2.08
CD44-213ENST00000525209 COX7BP24311 80 aa2.05□□□□□ -2.08
CD44-213ENST00000525209 MINOS1Q5TGZ0 78 aa2.05□□□□□ -2.08
CD44-213ENST00000525209 UBL5Q9BZL1 73 aa2.05□□□□□ -2.08
CD44-213ENST00000525209 KMT2CQ8NEZ4 4911 aaKnown RBP2.05□□□□□ -2.08
CD44-213ENST00000525209 RYR3Q15413 4870 aa2.05□□□□□ -2.08
CD44-213ENST00000525209 FCER1GP30273 86 aa2.04□□□□□ -2.08
CD44-213ENST00000525209 CSMD3Q7Z407 3707 aa2.04□□□□□ -2.08
CD44-213ENST00000525209 DEFB4AO15263 64 aa2.03□□□□□ -2.08
CD44-213ENST00000525209 APELAP0DMC3 54 aa2.03□□□□□ -2.08
CD44-213ENST00000525209 RPL37P61927 97 aaKnown RBP2.03□□□□□ -2.08
CD44-213ENST00000525209 DEFB135Q30KP9 77 aa2.03□□□□□ -2.08
CD44-213ENST00000525209 TOMM5Q8N4H5 51 aa2.03□□□□□ -2.08
CD44-213ENST00000525209 EPPK1P58107 5090 aaKnown RBP2.03□□□□□ -2.08
CD44-213ENST00000525209 NDUFA4O00483 81 aa2.02□□□□□ -2.09
CD44-213ENST00000525209 HTN3P15516 51 aa2.02□□□□□ -2.09
CD44-213ENST00000525209 PCOTHQ58A44 107 aa2.02□□□□□ -2.09
CD44-213ENST00000525209 SSBP3-AS1Q7Z2R9 100 aa2.02□□□□□ -2.09
CD44-213ENST00000525209 PCLOQ9Y6V0 5065 aa2□□□□□ -2.09
CD44-213ENST00000525209 PRH1P02810 166 aa2□□□□□ -2.09
CD44-213ENST00000525209 NMES1Q9C002 83 aa2□□□□□ -2.09
CD44-213ENST00000525209 BIRC6Q9NR09 4857 aa1.99□□□□□ -2.09
CD44-213ENST00000525209 K7EMI3 77 aa1.99□□□□□ -2.09
CD44-213ENST00000525209 CMC2Q9NRP2 79 aa1.99□□□□□ -2.09
CD44-213ENST00000525209 HYDINQ4G0P3 5121 aa1.99□□□□□ -2.09
CD44-213ENST00000525209 DEFB114Q30KQ6 69 aa1.98□□□□□ -2.09
CD44-213ENST00000525209 ABRACLQ9P1F3 81 aa1.98□□□□□ -2.09
CD44-213ENST00000525209 DEFB131BA0A096LNP1 70 aa1.97□□□□□ -2.09
CD44-213ENST00000525209 SMR3BP02814 79 aaPredicted RBP1.97□□□□□ -2.09
CD44-213ENST00000525209 FXYD6P3P58550 94 aa1.97□□□□□ -2.09
CD44-213ENST00000525209 PIGYQ3MUY2 71 aa1.97□□□□□ -2.09
CD44-213ENST00000525209 KCNQ1DNQ9H478 68 aa1.97□□□□□ -2.09
CD44-213ENST00000525209 RYR2Q92736 4967 aa1.96□□□□□ -2.1
CD44-213ENST00000525209 RPL39P5Q59GN2 51 aa1.96□□□□□ -2.1
CD44-213ENST00000525209 HTN1P15515 57 aa1.95□□□□□ -2.1
CD44-213ENST00000525209 LCE3EQ5T5B0 92 aa1.95□□□□□ -2.1
CD44-213ENST00000525209 USMG5Q96IX5 58 aa1.95□□□□□ -2.1
CD44-213ENST00000525209 DNAH9Q9NYC9 4486 aa1.95□□□□□ -2.1
CD44-213ENST00000525209 LYSTQ99698 3801 aa1.94□□□□□ -2.1
CD44-213ENST00000525209 SNRPGP62308 76 aaKnown RBP1.94□□□□□ -2.1
CD44-213ENST00000525209 SERF2P84101 59 aa1.94□□□□□ -2.1
CD44-213ENST00000525209 LINC01590Q5TEZ4 76 aa1.94□□□□□ -2.1
CD44-213ENST00000525209 Q5VSD8 79 aa1.94□□□□□ -2.1
CD44-213ENST00000525209 APLNQ9ULZ1 77 aa1.94□□□□□ -2.1
CD44-213ENST00000525209 IGIPA6NJ69 53 aa1.93□□□□□ -2.1
CD44-213ENST00000525209 H3BUA1 57 aa1.93□□□□□ -2.1
CD44-213ENST00000525209 ANGP03950 147 aaKnown RBP1.93□□□□□ -2.1
CD44-213ENST00000525209 DEFB131AP59861 70 aa1.93□□□□□ -2.1
CD44-213ENST00000525209 KRTAP13-3Q3SY46 172 aa1.93□□□□□ -2.1
CD44-213ENST00000525209 FRAS1Q86XX4 4008 aa1.93□□□□□ -2.1
CD44-213ENST00000525209 ETDCA0A1B0GVM5 59 aa1.92□□□□□ -2.1
CD44-213ENST00000525209 SPART-AS1P0CW21 52 aa1.92□□□□□ -2.1
CD44-213ENST00000525209 ARL14EPLP0DKL9 152 aa1.92□□□□□ -2.1
CD44-213ENST00000525209 DEFB130BP0DP73 79 aa1.92□□□□□ -2.1
CD44-213ENST00000525209 DEFB130AP0DP74 79 aa1.92□□□□□ -2.1
CD44-213ENST00000525209 PLNP26678 52 aa1.92□□□□□ -2.1
CD44-213ENST00000525209 KRTAP12-1P59990 96 aa1.92□□□□□ -2.1
CD44-213ENST00000525209 DNAH3Q8TD57 4116 aa1.92□□□□□ -2.1
CD44-213ENST00000525209 HUWE1Q7Z6Z7 4374 aaKnown RBP1.91□□□□□ -2.1
CD44-213ENST00000525209 DYNC2H1Q8NCM8 4307 aaKnown RBP1.91□□□□□ -2.1
CD44-213ENST00000525209 NDUFA3O95167 84 aa1.91□□□□□ -2.1
CD44-213ENST00000525209 RHPN1-AS1Q9BWJ2 59 aa1.91□□□□□ -2.1
CD44-213ENST00000525209 DNAH7Q8WXX0 4024 aa1.9□□□□□ -2.1
CD44-213ENST00000525209 STARD9Q9P2P6 4700 aa1.9□□□□□ -2.1
CD44-213ENST00000525209 RYR1P21817 5038 aa1.9□□□□□ -2.11
CD44-213ENST00000525209 I3L3M4 83 aa1.9□□□□□ -2.11
CD44-213ENST00000525209 ALMS1Q8TCU4 4167 aa1.9□□□□□ -2.11
CD44-213ENST00000525209 FLG2Q5D862 2391 aaPredicted RBP1.9□□□□□ -2.11
CD44-213ENST00000525209 SACSQ9NZJ4 4579 aa1.89□□□□□ -2.11
CD44-213ENST00000525209 KIAA1109Q2LD37 5005 aa1.89□□□□□ -2.11
CD44-213ENST00000525209 SMIM27A0A1W2PRY6 76 aa1.89□□□□□ -2.11
CD44-213ENST00000525209 KRTAP10-10P60014 251 aa1.89□□□□□ -2.11
CD44-213ENST00000525209 KRTAP4-3Q9BYR4 195 aa1.89□□□□□ -2.11
CD44-213ENST00000525209 HECTD4Q9Y4D8 3996 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms