RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 PRB3Q04118 309 aaPredicted RBP2.03□□□□□ -2.08
NPM1-212ENST00000524204 SMIM11BQ8TCY0 68 aa2.03□□□□□ -2.08
NPM1-212ENST00000524204 PRR15LQ9BU68 103 aa2.03□□□□□ -2.08
NPM1-212ENST00000524204 TNCP24821 2201 aa2.03□□□□□ -2.08
NPM1-212ENST00000524204 PKD1P98161 4303 aa2.03□□□□□ -2.09
NPM1-212ENST00000524204 C7orf77A4D0Y5 90 aa2.02□□□□□ -2.09
NPM1-212ENST00000524204 ZNF137PP52743 207 aa2.02□□□□□ -2.09
NPM1-212ENST00000524204 WFDC2Q14508 124 aa2.02□□□□□ -2.09
NPM1-212ENST00000524204 KRTAP6-3Q3LI67 103 aa2.02□□□□□ -2.09
NPM1-212ENST00000524204 LINC00643Q86TS7 51 aa2.02□□□□□ -2.09
NPM1-212ENST00000524204 DNAH5Q8TE73 4624 aa2.02□□□□□ -2.09
NPM1-212ENST00000524204 MINOS1Q5TGZ0 78 aa2.01□□□□□ -2.09
NPM1-212ENST00000524204 GAFA1Q96PS6 74 aa2.01□□□□□ -2.09
NPM1-212ENST00000524204 FAT1Q14517 4588 aa2□□□□□ -2.09
NPM1-212ENST00000524204 ARMS2P0C7Q2 107 aa2□□□□□ -2.09
NPM1-212ENST00000524204 S100A3P33764 101 aa2□□□□□ -2.09
NPM1-212ENST00000524204 PLAC4Q8WY50 150 aa2□□□□□ -2.09
NPM1-212ENST00000524204 SRRM2Q9UQ35 2752 aaKnown RBP1.99□□□□□ -2.09
NPM1-212ENST00000524204 MYCBP2O75592 4640 aa1.99□□□□□ -2.09
NPM1-212ENST00000524204 LEPROTL1O95214 131 aa1.99□□□□□ -2.09
NPM1-212ENST00000524204 GCHFRP30047 84 aa1.99□□□□□ -2.09
NPM1-212ENST00000524204 FXYD6P3P58550 94 aa1.99□□□□□ -2.09
NPM1-212ENST00000524204 LINC01600Q96MT4 127 aa1.99□□□□□ -2.09
NPM1-212ENST00000524204 SMCO4Q9NRQ5 59 aa1.99□□□□□ -2.09
NPM1-212ENST00000524204 HMCN2Q8NDA2 5059 aa1.98□□□□□ -2.09
NPM1-212ENST00000524204 LY6G6CO95867 125 aa1.98□□□□□ -2.09
NPM1-212ENST00000524204 KRTAP13-1Q8IUC0 172 aa1.98□□□□□ -2.09
NPM1-212ENST00000524204 PSENENQ9NZ42 101 aa1.98□□□□□ -2.09
NPM1-212ENST00000524204 FCGBPQ9Y6R7 5405 aaPredicted RBP1.98□□□□□ -2.09
NPM1-212ENST00000524204 CPSF4LA6NMK7 179 aaKnown RBP1.97□□□□□ -2.09
NPM1-212ENST00000524204 D6R8Y8 96 aa1.97□□□□□ -2.09
NPM1-212ENST00000524204 RPL37P61927 97 aaKnown RBP1.97□□□□□ -2.09
NPM1-212ENST00000524204 DEFB136Q30KP8 78 aa1.97□□□□□ -2.09
NPM1-212ENST00000524204 BVES-AS1Q5T3Y7 98 aa1.97□□□□□ -2.09
NPM1-212ENST00000524204 Q6ZRX8 168 aa1.97□□□□□ -2.09
NPM1-212ENST00000524204 MUSTN1Q8IVN3 82 aa1.97□□□□□ -2.09
NPM1-212ENST00000524204 HILPDAQ9Y5L2 63 aa1.97□□□□□ -2.09
NPM1-212ENST00000524204 GVQW2A0A096LPI5 108 aaPredicted RBP1.96□□□□□ -2.1
NPM1-212ENST00000524204 H3BUT2 72 aa1.96□□□□□ -2.1
NPM1-212ENST00000524204 IGLC2P0DOY2 106 aa1.96□□□□□ -2.1
NPM1-212ENST00000524204 IGLC3P0DOY3 106 aa1.96□□□□□ -2.1
NPM1-212ENST00000524204 HEPN1Q6WQI6 88 aa1.96□□□□□ -2.1
NPM1-212ENST00000524204 LINC00846Q9NV44 126 aa1.96□□□□□ -2.1
NPM1-212ENST00000524204 FLG2Q5D862 2391 aaPredicted RBP1.96□□□□□ -2.1
NPM1-212ENST00000524204 A0A087WVE0 104 aa1.95□□□□□ -2.1
NPM1-212ENST00000524204 DEFA5Q01523 94 aa1.95□□□□□ -2.1
NPM1-212ENST00000524204 SPRR4Q96PI1 79 aa1.95□□□□□ -2.1
NPM1-212ENST00000524204 MYMXA0A1B0GTQ4 84 aa1.94□□□□□ -2.1
NPM1-212ENST00000524204 PDCD5O14737 125 aa1.94□□□□□ -2.1
NPM1-212ENST00000524204 PLGLAQ15195 96 aa1.94□□□□□ -2.1
NPM1-212ENST00000524204 TMEM263Q8WUH6 116 aaKnown RBP1.94□□□□□ -2.1
NPM1-212ENST00000524204 APLNQ9ULZ1 77 aa1.94□□□□□ -2.1
NPM1-212ENST00000524204 SMIM31A0A1B0GVY4 71 aa1.93□□□□□ -2.1
NPM1-212ENST00000524204 ANGP03950 147 aaKnown RBP1.93□□□□□ -2.1
NPM1-212ENST00000524204 LINC01590Q5TEZ4 76 aa1.93□□□□□ -2.1
NPM1-212ENST00000524204 VPS13BQ7Z7G8 4022 aa1.92□□□□□ -2.1
NPM1-212ENST00000524204 G3V318 75 aa1.92□□□□□ -2.1
NPM1-212ENST00000524204 H3BSH0 61 aa1.92□□□□□ -2.1
NPM1-212ENST00000524204 RPS27P42677 84 aaKnown RBP1.92□□□□□ -2.1
NPM1-212ENST00000524204 CEBPZOSA8MTT3 80 aa1.91□□□□□ -2.1
NPM1-212ENST00000524204 GNGT1P63211 74 aa1.91□□□□□ -2.1
NPM1-212ENST00000524204 Q6JHZ5 121 aa1.91□□□□□ -2.1
NPM1-212ENST00000524204 LINC00472Q9H8W2 130 aa1.91□□□□□ -2.1
NPM1-212ENST00000524204 NDUFA3O95167 84 aa1.9□□□□□ -2.11
NPM1-212ENST00000524204 CFDP00746 253 aaPredicted RBP1.9□□□□□ -2.11
NPM1-212ENST00000524204 HAMPP81172 84 aa1.9□□□□□ -2.11
NPM1-212ENST00000524204 DEFB114Q30KQ6 69 aa1.9□□□□□ -2.11
NPM1-212ENST00000524204 Q6ZSA8 131 aa1.9□□□□□ -2.11
NPM1-212ENST00000524204 DEFB107AQ8IZN7 70 aa1.9□□□□□ -2.11
NPM1-212ENST00000524204 C18orf32Q8TCD1 76 aa1.9□□□□□ -2.11
NPM1-212ENST00000524204 RNF213Q63HN8 5207 aa1.9□□□□□ -2.11
NPM1-212ENST00000524204 LRP1Q07954 4544 aaKnown RBP1.9□□□□□ -2.11
NPM1-212ENST00000524204 H0Y9P7 68 aa1.89□□□□□ -2.11
NPM1-212ENST00000524204 H3BUA1 57 aa1.89□□□□□ -2.11
NPM1-212ENST00000524204 KLK9Q2XQG4 91 aa1.89□□□□□ -2.11
NPM1-212ENST00000524204 C10orf113Q5VZT2 155 aa1.89□□□□□ -2.11
NPM1-212ENST00000524204 TRBV6-1A0A0K0K1D8 114 aa1.88□□□□□ -2.11
NPM1-212ENST00000524204 LEAP2Q969E1 77 aa1.88□□□□□ -2.11
NPM1-212ENST00000524204 CMC2Q9NRP2 79 aa1.88□□□□□ -2.11
NPM1-212ENST00000524204 LRP2P98164 4655 aa1.88□□□□□ -2.11
NPM1-212ENST00000524204 SMIM13P0DJ93 91 aa1.87□□□□□ -2.11
NPM1-212ENST00000524204 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
NPM1-212ENST00000524204 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
NPM1-212ENST00000524204 USMG5Q96IX5 58 aa1.87□□□□□ -2.11
NPM1-212ENST00000524204 UBE2D4Q9Y2X8 147 aa1.87□□□□□ -2.11
NPM1-212ENST00000524204 DNAH8Q96JB1 4490 aa1.87□□□□□ -2.11
NPM1-212ENST00000524204 FAT3Q8TDW7 4589 aa1.86□□□□□ -2.11
NPM1-212ENST00000524204 DEFB135Q30KP9 77 aa1.86□□□□□ -2.11
NPM1-212ENST00000524204 C6orf201Q7Z4U5 140 aa1.86□□□□□ -2.11
NPM1-212ENST00000524204 UBE2DNLQ8IWF7 75 aa1.86□□□□□ -2.11
NPM1-212ENST00000524204 SPATA8Q6RVD6 105 aa1.85□□□□□ -2.11
NPM1-212ENST00000524204 PKHD1L1Q86WI1 4243 aa1.85□□□□□ -2.11
NPM1-212ENST00000524204 Q5VSD8 79 aa1.84□□□□□ -2.11
NPM1-212ENST00000524204 FAM103A1Q9BTL3 118 aaKnown RBP1.84□□□□□ -2.11
NPM1-212ENST00000524204 TNXBP22105 4242 aa1.83□□□□□ -2.12
NPM1-212ENST00000524204 A0A1B0GUT8 65 aa1.83□□□□□ -2.12
NPM1-212ENST00000524204 UMAD1C9J7I0 102 aa1.83□□□□□ -2.12
NPM1-212ENST00000524204 PLAC8Q9NZF1 115 aa1.83□□□□□ -2.12
NPM1-212ENST00000524204 FAT4Q6V0I7 4981 aa1.82□□□□□ -2.12
NPM1-212ENST00000524204 DEFB131BA0A096LNP1 70 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms