RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 UBE2D1P51668 147 aa1.17□□□□□ -2.22
HMGB1P1-201ENST00000522557 FAM74A4Q5TZK3 123 aa1.17□□□□□ -2.22
HMGB1P1-201ENST00000522557 TOMM5Q8N4H5 51 aa1.17□□□□□ -2.22
HMGB1P1-201ENST00000522557 DSCR8Q96T75 97 aa1.17□□□□□ -2.22
HMGB1P1-201ENST00000522557 MGST2Q99735 147 aa1.17□□□□□ -2.22
HMGB1P1-201ENST00000522557 MRPL35Q9NZE8 188 aaKnown RBP1.17□□□□□ -2.22
HMGB1P1-201ENST00000522557 PKHD1L1Q86WI1 4243 aa1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 TRBV25-1A0A075B6N4 114 aa1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 TRBV10-1A0A0K0K1A3 114 aa1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 UBE2L3P68036 154 aaKnown RBP1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 C9orf116Q5BN46 136 aaPredicted RBP1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 CLPSL2Q6UWE3 100 aa1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 SMIM4Q8WVI0 70 aa1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 IFI27L1Q96BM0 104 aa1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 DMAC1Q96GE9 116 aa1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 FAM167A-AS1Q96KT0 104 aa1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 HMCN2Q8NDA2 5059 aa1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 UBE2L5PA0A1B0GUS4 154 aa1.15□□□□□ -2.23
HMGB1P1-201ENST00000522557 NAP1L6A6NFF2 107 aa1.15□□□□□ -2.23
HMGB1P1-201ENST00000522557 ARMS2P0C7Q2 107 aa1.15□□□□□ -2.23
HMGB1P1-201ENST00000522557 UBE2D3P61077 147 aa1.15□□□□□ -2.23
HMGB1P1-201ENST00000522557 UBE2D2P62837 147 aa1.15□□□□□ -2.23
HMGB1P1-201ENST00000522557 ZNF56Q15929 161 aa1.15□□□□□ -2.23
HMGB1P1-201ENST00000522557 COL5A1-AS1Q5SY13 56 aa1.15□□□□□ -2.23
HMGB1P1-201ENST00000522557 Q8N8P6 123 aa1.15□□□□□ -2.23
HMGB1P1-201ENST00000522557 AQP10Q96PS8 301 aa1.15□□□□□ -2.23
HMGB1P1-201ENST00000522557 A0A096LNI7 61 aa1.14□□□□□ -2.23
HMGB1P1-201ENST00000522557 TRBV6-1A0A0K0K1D8 114 aa1.14□□□□□ -2.23
HMGB1P1-201ENST00000522557 TRBV10-3A0A0K0K1G6 114 aa1.14□□□□□ -2.23
HMGB1P1-201ENST00000522557 H3BVH4 76 aa1.14□□□□□ -2.23
HMGB1P1-201ENST00000522557 CCKP06307 115 aa1.14□□□□□ -2.23
HMGB1P1-201ENST00000522557 SPATA45Q537H7 98 aa1.14□□□□□ -2.23
HMGB1P1-201ENST00000522557 C5orf38Q86SI9 138 aa1.14□□□□□ -2.23
HMGB1P1-201ENST00000522557 LRP2P98164 4655 aa1.13□□□□□ -2.23
HMGB1P1-201ENST00000522557 TRAV13-2A0A0B4J235 113 aa1.13□□□□□ -2.23
HMGB1P1-201ENST00000522557 HIGD1CA8MV81 97 aa1.13□□□□□ -2.23
HMGB1P1-201ENST00000522557 MPC2O95563 127 aa1.13□□□□□ -2.23
HMGB1P1-201ENST00000522557 MGPP08493 103 aa1.13□□□□□ -2.23
HMGB1P1-201ENST00000522557 PDE6GP18545 87 aa1.13□□□□□ -2.23
HMGB1P1-201ENST00000522557 TMEM167BQ9NRX6 74 aa1.13□□□□□ -2.23
HMGB1P1-201ENST00000522557 LRP1Q07954 4544 aaKnown RBP1.13□□□□□ -2.23
HMGB1P1-201ENST00000522557 GVQW2A0A096LPI5 108 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P1-201ENST00000522557 GCHFRP30047 84 aa1.12□□□□□ -2.23
HMGB1P1-201ENST00000522557 ATP5EP56381 51 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P1-201ENST00000522557 SNHG12Q9BXW3 62 aa1.12□□□□□ -2.23
HMGB1P1-201ENST00000522557 ARL2-SNX15V9GYD0 113 aa1.12□□□□□ -2.23
HMGB1P1-201ENST00000522557 LINC00959A0A1B0GUT2 108 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 LOC101927531A0A1B0GV80 90 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 HCG22E2RYF7 251 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 F2Z2F3 143 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 M0QY20 66 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 M0R2T5 61 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 SIX6O95475 246 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 CRIP1P50238 77 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 SERF2P84101 59 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 BAGE2Q86Y30 109 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 DNAH8Q96JB1 4490 aa1.1□□□□□ -2.23
HMGB1P1-201ENST00000522557 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.1□□□□□ -2.23
HMGB1P1-201ENST00000522557 NDUFA1O15239 70 aa1.1□□□□□ -2.23
HMGB1P1-201ENST00000522557 SPAG11AQ6PDA7 123 aa1.1□□□□□ -2.23
HMGB1P1-201ENST00000522557 C20orf197Q8N268 126 aa1.1□□□□□ -2.23
HMGB1P1-201ENST00000522557 VAMP8Q9BV40 100 aa1.1□□□□□ -2.23
HMGB1P1-201ENST00000522557 TNXBP22105 4242 aa1.1□□□□□ -2.23
HMGB1P1-201ENST00000522557 FAT3Q8TDW7 4589 aa1.1□□□□□ -2.23
HMGB1P1-201ENST00000522557 TEX49A0A1B0GTD5 131 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 CTXND1A0A1B0GTU2 59 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 I3L3M4 83 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 FCER1GP30273 86 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 SPAG11BQ08648 103 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 Q86TA4 180 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 PPP1R1CQ8WVI7 109 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 ST20Q9HBF5 79 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 CDC42SE2Q9NRR3 84 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 UBE2D4Q9Y2X8 147 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 V9GYH0 126 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 FAT4Q6V0I7 4981 aa1.09□□□□□ -2.24
HMGB1P1-201ENST00000522557 BCE1O60756 84 aa1.08□□□□□ -2.24
HMGB1P1-201ENST00000522557 PPP1R17O96001 155 aa1.08□□□□□ -2.24
HMGB1P1-201ENST00000522557 MT-ATP8P03928 68 aa1.08□□□□□ -2.24
HMGB1P1-201ENST00000522557 COX6B2Q6YFQ2 88 aa1.08□□□□□ -2.24
HMGB1P1-201ENST00000522557 Q6ZQY7 126 aa1.08□□□□□ -2.24
HMGB1P1-201ENST00000522557 C9orf62Q8N4C0 152 aa1.08□□□□□ -2.24
HMGB1P1-201ENST00000522557 CYP4F30PQ9H0H9 118 aa1.08□□□□□ -2.24
HMGB1P1-201ENST00000522557 LINC00846Q9NV44 126 aa1.08□□□□□ -2.24
HMGB1P1-201ENST00000522557 TRBV30A0A0K0K1B3 111 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 C7orf77A4D0Y5 90 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 KRTDAPP60985 99 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 FAM213BQ8TBF2 198 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 COX7B2Q8TF08 81 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 RPL39LQ96EH5 51 aaKnown RBP1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 LINC00208Q96KT6 92 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 PMCHL2Q9BQD1 86 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 MANBALQ9NQG1 85 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 TOMM7Q9P0U1 55 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 C6orf48Q9UBA6 75 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 A0A1W2PPM0 123 aa1.06□□□□□ -2.24
HMGB1P1-201ENST00000522557 hADV29S1A0JD25 119 aa1.06□□□□□ -2.24
HMGB1P1-201ENST00000522557 NCR3O14931 201 aa1.06□□□□□ -2.24
HMGB1P1-201ENST00000522557 SPINK1P00995 79 aa1.06□□□□□ -2.24
HMGB1P1-201ENST00000522557 POLR2KP53803 58 aaKnown RBP1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms