RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 KRTAP13-1Q8IUC0 172 aa7.64□□□□□ -1.19
TRAPPC9-208ENST00000520857 ZNF861PO60384 105 aa7.64□□□□□ -1.19
TRAPPC9-208ENST00000520857 RTL8CO15255 209 aa7.63□□□□□ -1.19
TRAPPC9-208ENST00000520857 SPACA4Q8TDM5 124 aa7.63□□□□□ -1.19
TRAPPC9-208ENST00000520857 IGKV2D-30A0A075B6S6 120 aa7.62□□□□□ -1.19
TRAPPC9-208ENST00000520857 IGKV2-30P06310 120 aa7.62□□□□□ -1.19
TRAPPC9-208ENST00000520857 LINC00313P59037 77 aa7.6□□□□□ -1.19
TRAPPC9-208ENST00000520857 IGLV5-52A0A0A0MRZ9 124 aa7.6□□□□□ -1.19
TRAPPC9-208ENST00000520857 SPINK1P00995 79 aa7.6□□□□□ -1.19
TRAPPC9-208ENST00000520857 ASB16-AS1Q495Z4 193 aa7.59□□□□□ -1.19
TRAPPC9-208ENST00000520857 A0A087WTM6 91 aa7.59□□□□□ -1.19
TRAPPC9-208ENST00000520857 ANK2Q01484 3957 aa7.58□□□□□ -1.2
TRAPPC9-208ENST00000520857 NUPR2A6NF83 97 aa7.57□□□□□ -1.2
TRAPPC9-208ENST00000520857 LINC00483Q53H64 154 aa7.57□□□□□ -1.2
TRAPPC9-208ENST00000520857 DNAH10Q8IVF4 4471 aa7.57□□□□□ -1.2
TRAPPC9-208ENST00000520857 PLAC8Q9NZF1 115 aa7.56□□□□□ -1.2
TRAPPC9-208ENST00000520857 ADM2Q7Z4H4 148 aa7.56□□□□□ -1.2
TRAPPC9-208ENST00000520857 FAM229AH3BQW9 127 aa7.55□□□□□ -1.2
TRAPPC9-208ENST00000520857 TGP01266 2768 aa7.54□□□□□ -1.2
TRAPPC9-208ENST00000520857 MIR22HGQ0VDD5 57 aa7.53□□□□□ -1.2
TRAPPC9-208ENST00000520857 C8orf87E5RJ46 101 aa7.53□□□□□ -1.2
TRAPPC9-208ENST00000520857 UQCR11O14957 56 aa7.52□□□□□ -1.21
TRAPPC9-208ENST00000520857 Q6ZRN7 208 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC9-208ENST00000520857 IGLV7-43P04211 117 aa7.51□□□□□ -1.21
TRAPPC9-208ENST00000520857 DMAC1Q96GE9 116 aa7.48□□□□□ -1.21
TRAPPC9-208ENST00000520857 C4orf48Q5BLP8 95 aa7.47□□□□□ -1.21
TRAPPC9-208ENST00000520857 SSBP3-AS1Q7Z2R9 100 aa7.46□□□□□ -1.22
TRAPPC9-208ENST00000520857 LY6G6CO95867 125 aa7.45□□□□□ -1.22
TRAPPC9-208ENST00000520857 C1orf134Q5TEV5 83 aa7.45□□□□□ -1.22
TRAPPC9-208ENST00000520857 HUWE1Q7Z6Z7 4374 aaKnown RBP7.43□□□□□ -1.22
TRAPPC9-208ENST00000520857 FBN3Q75N90 2809 aa7.43□□□□□ -1.22
TRAPPC9-208ENST00000520857 LINC01554Q52M75 96 aa7.42□□□□□ -1.22
TRAPPC9-208ENST00000520857 Q8N1X5 172 aa7.41□□□□□ -1.22
TRAPPC9-208ENST00000520857 LYSTQ99698 3801 aa7.4□□□□□ -1.22
TRAPPC9-208ENST00000520857 KRTAP13-3Q3SY46 172 aa7.39□□□□□ -1.23
TRAPPC9-208ENST00000520857 SPATA8Q6RVD6 105 aa7.38□□□□□ -1.23
TRAPPC9-208ENST00000520857 CSAG1Q6PB30 78 aa7.37□□□□□ -1.23
TRAPPC9-208ENST00000520857 FLG2Q5D862 2391 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC9-208ENST00000520857 PLA2G1BP04054 148 aaKnown RBP7.36□□□□□ -1.23
TRAPPC9-208ENST00000520857 H3BS24 57 aa7.35□□□□□ -1.23
TRAPPC9-208ENST00000520857 DNAH9Q9NYC9 4486 aa7.35□□□□□ -1.23
TRAPPC9-208ENST00000520857 MEGF8Q7Z7M0 2845 aa7.33□□□□□ -1.24
TRAPPC9-208ENST00000520857 DMBT1Q9UGM3 2413 aaPredicted RBP7.32□□□□□ -1.24
TRAPPC9-208ENST00000520857 DNAH1Q9P2D7 4330 aa7.31□□□□□ -1.24
TRAPPC9-208ENST00000520857 KRTAP13-2Q52LG2 175 aa7.28□□□□□ -1.24
TRAPPC9-208ENST00000520857 TYMSOSQ8TAI1 123 aa7.28□□□□□ -1.24
TRAPPC9-208ENST00000520857 KRTAP10-2P60368 255 aa7.26□□□□□ -1.25
TRAPPC9-208ENST00000520857 PLECQ15149 4684 aaKnown RBP7.22□□□□□ -1.25
TRAPPC9-208ENST00000520857 CMYA5Q8N3K9 4069 aa7.22□□□□□ -1.25
TRAPPC9-208ENST00000520857 C9orf92A6NGG3 77 aa7.21□□□□□ -1.26
TRAPPC9-208ENST00000520857 KRTAP16-1A8MUX0 517 aa7.19□□□□□ -1.26
TRAPPC9-208ENST00000520857 CRIPTQ9P021 101 aa7.17□□□□□ -1.26
TRAPPC9-208ENST00000520857 K7ERS5 55 aa7.17□□□□□ -1.26
TRAPPC9-208ENST00000520857 DNAH7Q8WXX0 4024 aa7.16□□□□□ -1.26
TRAPPC9-208ENST00000520857 KRTAP10-1P60331 282 aa7.16□□□□□ -1.26
TRAPPC9-208ENST00000520857 FRAS1Q86XX4 4008 aa7.15□□□□□ -1.26
TRAPPC9-208ENST00000520857 DNAH8Q96JB1 4490 aa7.15□□□□□ -1.26
TRAPPC9-208ENST00000520857 A0A1B0GU33 70 aa7.15□□□□□ -1.27
TRAPPC9-208ENST00000520857 DNAH3Q8TD57 4116 aa7.14□□□□□ -1.27
TRAPPC9-208ENST00000520857 LINC00304Q8N9R0 145 aa7.13□□□□□ -1.27
TRAPPC9-208ENST00000520857 Q6ZSA8 131 aa7.09□□□□□ -1.27
TRAPPC9-208ENST00000520857 SMR3BP02814 79 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC9-208ENST00000520857 KRTAP1-4P0C5Y4 121 aa7.07□□□□□ -1.28
TRAPPC9-208ENST00000520857 H0YAA0 97 aa7.07□□□□□ -1.28
TRAPPC9-208ENST00000520857 STARD9Q9P2P6 4700 aa7.03□□□□□ -1.28
TRAPPC9-208ENST00000520857 H1FX-AS1Q4G0G2 97 aa7.02□□□□□ -1.29
TRAPPC9-208ENST00000520857 KRTAP25-1Q3LHN0 102 aa7.02□□□□□ -1.29
TRAPPC9-208ENST00000520857 DNAH17Q9UFH2 4485 aa7.01□□□□□ -1.29
TRAPPC9-208ENST00000520857 A8MUU9 505 aa7□□□□□ -1.29
TRAPPC9-208ENST00000520857 ALMS1Q8TCU4 4167 aa7□□□□□ -1.29
TRAPPC9-208ENST00000520857 KMT2AQ03164 3969 aa7□□□□□ -1.29
TRAPPC9-208ENST00000520857 A0A0D9SG42 100 aa6.99□□□□□ -1.29
TRAPPC9-208ENST00000520857 DNAH11Q96DT5 4516 aa6.97□□□□□ -1.29
TRAPPC9-208ENST00000520857 VPS13DQ5THJ4 4388 aa6.95□□□□□ -1.3
TRAPPC9-208ENST00000520857 HECTD4Q9Y4D8 3996 aa6.94□□□□□ -1.3
TRAPPC9-208ENST00000520857 DNHD1Q96M86 4753 aa6.93□□□□□ -1.3
TRAPPC9-208ENST00000520857 ROMO1P60602 79 aa6.92□□□□□ -1.3
TRAPPC9-208ENST00000520857 SPINT4Q6UDR6 99 aa6.91□□□□□ -1.3
TRAPPC9-208ENST00000520857 DNAH2Q9P225 4427 aa6.9□□□□□ -1.31
TRAPPC9-208ENST00000520857 COX6B2Q6YFQ2 88 aa6.89□□□□□ -1.31
TRAPPC9-208ENST00000520857 LRP1BQ9NZR2 4599 aa6.88□□□□□ -1.31
TRAPPC9-208ENST00000520857 KRTAP3-1Q9BYR8 98 aa6.87□□□□□ -1.31
TRAPPC9-208ENST00000520857 DNAH6Q9C0G6 4158 aa6.86□□□□□ -1.31
TRAPPC9-208ENST00000520857 PRKDCP78527 4128 aaKnown RBP6.86□□□□□ -1.31
TRAPPC9-208ENST00000520857 C20orf166-AS1Q96NR2 134 aa6.83□□□□□ -1.32
TRAPPC9-208ENST00000520857 DYNC2H1Q8NCM8 4307 aaKnown RBP6.83□□□□□ -1.32
TRAPPC9-208ENST00000520857 RPL37P61927 97 aaKnown RBP6.82□□□□□ -1.32
TRAPPC9-208ENST00000520857 RPS29P62273 56 aaKnown RBP6.79□□□□□ -1.32
TRAPPC9-208ENST00000520857 DNAH5Q8TE73 4624 aa6.75□□□□□ -1.33
TRAPPC9-208ENST00000520857 C10orf95Q9H7T3 257 aa6.72□□□□□ -1.33
TRAPPC9-208ENST00000520857 VPS13BQ7Z7G8 4022 aa6.71□□□□□ -1.34
TRAPPC9-208ENST00000520857 S4R3F8 94 aa6.68□□□□□ -1.34
TRAPPC9-208ENST00000520857 P0C880 135 aa6.64□□□□□ -1.35
TRAPPC9-208ENST00000520857 KRTAP13-4Q3LI77 160 aa6.64□□□□□ -1.35
TRAPPC9-208ENST00000520857 KRTAP21-3Q3LHN1 58 aa6.62□□□□□ -1.35
TRAPPC9-208ENST00000520857 TPRXLQ17RH7 258 aa6.61□□□□□ -1.35
TRAPPC9-208ENST00000520857 NDUFAF8A1L188 74 aa6.6□□□□□ -1.35
TRAPPC9-208ENST00000520857 KRTAP10-6P60371 365 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC9-208ENST00000520857 FAT1Q14517 4588 aa6.59□□□□□ -1.35
TRAPPC9-208ENST00000520857 HYDINQ4G0P3 5121 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms