RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 SPRR2GQ9BYE4 73 aa1.24□□□□□ -2.21
LINC00535-204ENST00000520513 TNFSF18Q9UNG2 199 aa1.24□□□□□ -2.21
LINC00535-204ENST00000520513 A0A087WXM4 84 aa1.23□□□□□ -2.21
LINC00535-204ENST00000520513 CTXND1A0A1B0GTU2 59 aa1.23□□□□□ -2.21
LINC00535-204ENST00000520513 hDV103S1A0JD37 113 aa1.23□□□□□ -2.21
LINC00535-204ENST00000520513 MPC2O95563 127 aa1.23□□□□□ -2.21
LINC00535-204ENST00000520513 SPRR1BP22528 89 aa1.23□□□□□ -2.21
LINC00535-204ENST00000520513 RPL35P42766 123 aaKnown RBP1.23□□□□□ -2.21
LINC00535-204ENST00000520513 PPP1R1CQ8WVI7 109 aa1.23□□□□□ -2.21
LINC00535-204ENST00000520513 SMIM3Q9BZL3 60 aa1.23□□□□□ -2.21
LINC00535-204ENST00000520513 KCNQ1DNQ9H478 68 aa1.23□□□□□ -2.21
LINC00535-204ENST00000520513 SPANXA1Q9NS26 97 aa1.23□□□□□ -2.21
LINC00535-204ENST00000520513 NCR3O14931 201 aa1.22□□□□□ -2.21
LINC00535-204ENST00000520513 PFDN1O60925 122 aa1.22□□□□□ -2.21
LINC00535-204ENST00000520513 IL7P13232 177 aa1.22□□□□□ -2.21
LINC00535-204ENST00000520513 UBE2G1P62253 170 aa1.22□□□□□ -2.21
LINC00535-204ENST00000520513 BAGE2Q86Y30 109 aa1.22□□□□□ -2.21
LINC00535-204ENST00000520513 CCDC32Q9BV29 185 aa1.22□□□□□ -2.21
LINC00535-204ENST00000520513 K7ERJ3 54 aa1.21□□□□□ -2.22
LINC00535-204ENST00000520513 ALKAL2Q6UX46 152 aa1.21□□□□□ -2.22
LINC00535-204ENST00000520513 PRR15Q8IV56 129 aa1.21□□□□□ -2.22
LINC00535-204ENST00000520513 TMEM191AQ9H0A3 160 aa1.21□□□□□ -2.22
LINC00535-204ENST00000520513 ST20Q9HBF5 79 aa1.21□□□□□ -2.22
LINC00535-204ENST00000520513 CDKN2A-AS1Q9UH64 79 aa1.21□□□□□ -2.22
LINC00535-204ENST00000520513 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
LINC00535-204ENST00000520513 MAP1LC3B2A6NCE7 125 aa1.2□□□□□ -2.22
LINC00535-204ENST00000520513 IGIPA6NJ69 53 aa1.2□□□□□ -2.22
LINC00535-204ENST00000520513 LIMD2Q9BT23 127 aa1.2□□□□□ -2.22
LINC00535-204ENST00000520513 HSPB8Q9UJY1 196 aa1.2□□□□□ -2.22
LINC00535-204ENST00000520513 MT1XP80297 61 aa1.19□□□□□ -2.22
LINC00535-204ENST00000520513 Q5BKY6 102 aa1.19□□□□□ -2.22
LINC00535-204ENST00000520513 RPL7L1Q6DKI1 246 aaKnown RBP1.19□□□□□ -2.22
LINC00535-204ENST00000520513 Q6ZRX8 168 aa1.19□□□□□ -2.22
LINC00535-204ENST00000520513 KRTAP8-1Q8IUC2 63 aa1.19□□□□□ -2.22
LINC00535-204ENST00000520513 SMIM2Q9BVW6 85 aa1.19□□□□□ -2.22
LINC00535-204ENST00000520513 Q9H521 79 aa1.19□□□□□ -2.22
LINC00535-204ENST00000520513 TMEM141Q96I45 108 aa1.18□□□□□ -2.22
LINC00535-204ENST00000520513 C20orf78Q9BR46 151 aa1.18□□□□□ -2.22
LINC00535-204ENST00000520513 LOC107984156A0A0G2JMH3 177 aa1.17□□□□□ -2.22
LINC00535-204ENST00000520513 CKS1BP61024 79 aa1.17□□□□□ -2.22
LINC00535-204ENST00000520513 Q5VV11 94 aa1.17□□□□□ -2.22
LINC00535-204ENST00000520513 ARL17AQ8IVW1 177 aa1.17□□□□□ -2.22
LINC00535-204ENST00000520513 NAT8BQ9UHF3 227 aa1.17□□□□□ -2.22
LINC00535-204ENST00000520513 LAMTOR2Q9Y2Q5 125 aa1.17□□□□□ -2.22
LINC00535-204ENST00000520513 TRBV10-3A0A0K0K1G6 114 aa1.16□□□□□ -2.22
LINC00535-204ENST00000520513 A0A1W2PPM0 123 aa1.16□□□□□ -2.22
LINC00535-204ENST00000520513 FCER1GP30273 86 aa1.16□□□□□ -2.22
LINC00535-204ENST00000520513 COX17Q14061 63 aa1.16□□□□□ -2.22
LINC00535-204ENST00000520513 ATP11AUNQ6ZP68 121 aa1.16□□□□□ -2.22
LINC00535-204ENST00000520513 AKAP14Q86UN6 197 aa1.16□□□□□ -2.22
LINC00535-204ENST00000520513 COX7B2Q8TF08 81 aa1.16□□□□□ -2.22
LINC00535-204ENST00000520513 TOMM7Q9P0U1 55 aa1.16□□□□□ -2.22
LINC00535-204ENST00000520513 A0A1B0GUT8 65 aa1.15□□□□□ -2.23
LINC00535-204ENST00000520513 HIGD1CA8MV81 97 aa1.15□□□□□ -2.23
LINC00535-204ENST00000520513 JMJD7-PLA2G4BH0Y9G9 81 aa1.15□□□□□ -2.23
LINC00535-204ENST00000520513 C9orf153Q5TBE3 101 aa1.15□□□□□ -2.23
LINC00535-204ENST00000520513 HRCT1Q6UXD1 115 aa1.15□□□□□ -2.23
LINC00535-204ENST00000520513 LINC00575Q6W349 94 aa1.15□□□□□ -2.23
LINC00535-204ENST00000520513 ERG28Q9UKR5 140 aa1.15□□□□□ -2.23
LINC00535-204ENST00000520513 TRBV20-1A0A075B6N2 111 aa1.14□□□□□ -2.23
LINC00535-204ENST00000520513 PPP1R17O96001 155 aa1.14□□□□□ -2.23
LINC00535-204ENST00000520513 IFI27P40305 119 aaPredicted RBP1.14□□□□□ -2.23
LINC00535-204ENST00000520513 MT4P47944 62 aa1.14□□□□□ -2.23
LINC00535-204ENST00000520513 GNG4P50150 75 aa1.14□□□□□ -2.23
LINC00535-204ENST00000520513 V9GYV3 84 aa1.14□□□□□ -2.23
LINC00535-204ENST00000520513 IGLV5-48A0A075B6I7 105 aa1.13□□□□□ -2.23
LINC00535-204ENST00000520513 A0A1B0GV72 72 aa1.13□□□□□ -2.23
LINC00535-204ENST00000520513 D6R8Y8 96 aa1.13□□□□□ -2.23
LINC00535-204ENST00000520513 NDUFA6P56556 154 aa1.13□□□□□ -2.23
LINC00535-204ENST00000520513 SPATA45Q537H7 98 aa1.13□□□□□ -2.23
LINC00535-204ENST00000520513 KCNRGQ8N5I3 272 aa1.13□□□□□ -2.23
LINC00535-204ENST00000520513 Q96NJ1 140 aa1.13□□□□□ -2.23
LINC00535-204ENST00000520513 MANBALQ9NQG1 85 aa1.13□□□□□ -2.23
LINC00535-204ENST00000520513 FXYD6-FXYD2A0A087WZ82 144 aa1.12□□□□□ -2.23
LINC00535-204ENST00000520513 ETDCA0A1B0GVM5 59 aa1.12□□□□□ -2.23
LINC00535-204ENST00000520513 LINC01546A6NGU7 62 aa1.12□□□□□ -2.23
LINC00535-204ENST00000520513 SPINK8P0C7L1 97 aa1.12□□□□□ -2.23
LINC00535-204ENST00000520513 IGLC3P0DOY3 106 aa1.12□□□□□ -2.23
LINC00535-204ENST00000520513 ADCYAP1P18509 176 aa1.12□□□□□ -2.23
LINC00535-204ENST00000520513 SMIM15Q7Z3B0 74 aa1.12□□□□□ -2.23
LINC00535-204ENST00000520513 SMIM27A0A1W2PRY6 76 aa1.11□□□□□ -2.23
LINC00535-204ENST00000520513 UMAD1C9J7I0 102 aa1.11□□□□□ -2.23
LINC00535-204ENST00000520513 FABP2P12104 132 aa1.11□□□□□ -2.23
LINC00535-204ENST00000520513 FABP4P15090 132 aa1.11□□□□□ -2.23
LINC00535-204ENST00000520513 SEC11AP67812 179 aa1.11□□□□□ -2.23
LINC00535-204ENST00000520513 MIR22HGQ0VDD5 57 aa1.11□□□□□ -2.23
LINC00535-204ENST00000520513 LINC00299Q6ZSB3 139 aa1.11□□□□□ -2.23
LINC00535-204ENST00000520513 C2orf88Q9BSF0 95 aa1.11□□□□□ -2.23
LINC00535-204ENST00000520513 PRO1933Q9H354 126 aa1.11□□□□□ -2.23
LINC00535-204ENST00000520513 KRTAP20-2Q3LI61 65 aa1.1□□□□□ -2.23
LINC00535-204ENST00000520513 KRTAP19-7Q3SYF9 63 aa1.1□□□□□ -2.23
LINC00535-204ENST00000520513 Q8N8P6 123 aa1.1□□□□□ -2.23
LINC00535-204ENST00000520513 FAM213BQ8TBF2 198 aa1.1□□□□□ -2.23
LINC00535-204ENST00000520513 GNG13Q9P2W3 67 aa1.1□□□□□ -2.23
LINC00535-204ENST00000520513 BORCS7-ASMTA0A0B4J1R7 106 aa1.09□□□□□ -2.23
LINC00535-204ENST00000520513 TRBV7-7A0A0K0K1E9 115 aa1.09□□□□□ -2.23
LINC00535-204ENST00000520513 K7EMI3 77 aa1.09□□□□□ -2.23
LINC00535-204ENST00000520513 CKS2P33552 79 aa1.09□□□□□ -2.23
LINC00535-204ENST00000520513 ELOF1P60002 83 aaKnown RBP1.09□□□□□ -2.23
LINC00535-204ENST00000520513 TRAV23DV6A0A075B6W5 121 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms