RNA–Protein interactions for RNA: ENST00000518436.5

LINC01339-202, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-202ENST00000518436 SMR3BP02814 79 aaPredicted RBP1.28□□□□□ -2.2
LINC01339-202ENST00000518436 GCHFRP30047 84 aa1.28□□□□□ -2.2
LINC01339-202ENST00000518436 Q5VSD8 79 aa1.28□□□□□ -2.2
LINC01339-202ENST00000518436 SFTA2Q6UW10 78 aa1.28□□□□□ -2.2
LINC01339-202ENST00000518436 C20orf78Q9BR46 151 aa1.28□□□□□ -2.2
LINC01339-202ENST00000518436 PRR15LQ9BU68 103 aa1.28□□□□□ -2.2
LINC01339-202ENST00000518436 VPS13BQ7Z7G8 4022 aa1.27□□□□□ -2.21
LINC01339-202ENST00000518436 M0R1W7 72 aa1.27□□□□□ -2.21
LINC01339-202ENST00000518436 SMIM11AP58511 58 aa1.27□□□□□ -2.21
LINC01339-202ENST00000518436 PSMG4Q5JS54 123 aa1.27□□□□□ -2.21
LINC01339-202ENST00000518436 FAM223BA6NKX1 122 aa1.26□□□□□ -2.21
LINC01339-202ENST00000518436 ZNF815PA8K554 130 aa1.26□□□□□ -2.21
LINC01339-202ENST00000518436 CYB5AP00167 134 aa1.26□□□□□ -2.21
LINC01339-202ENST00000518436 KRTAP10-4P60372 401 aaPredicted RBP1.26□□□□□ -2.21
LINC01339-202ENST00000518436 HAMPP81172 84 aa1.26□□□□□ -2.21
LINC01339-202ENST00000518436 HMGN3Q15651 99 aa1.26□□□□□ -2.21
LINC01339-202ENST00000518436 S100A16Q96FQ6 103 aaKnown RBP1.26□□□□□ -2.21
LINC01339-202ENST00000518436 SPRR4Q96PI1 79 aa1.26□□□□□ -2.21
LINC01339-202ENST00000518436 APLNQ9ULZ1 77 aa1.26□□□□□ -2.21
LINC01339-202ENST00000518436 LRP1Q07954 4544 aaKnown RBP1.26□□□□□ -2.21
LINC01339-202ENST00000518436 A0A1B0GWA3 101 aa1.25□□□□□ -2.21
LINC01339-202ENST00000518436 IQCF6A8MYZ5 107 aa1.25□□□□□ -2.21
LINC01339-202ENST00000518436 DEFB4AO15263 64 aa1.25□□□□□ -2.21
LINC01339-202ENST00000518436 IFI6P09912 130 aa1.25□□□□□ -2.21
LINC01339-202ENST00000518436 PEA15Q15121 130 aa1.25□□□□□ -2.21
LINC01339-202ENST00000518436 GAFA1Q96PS6 74 aa1.25□□□□□ -2.21
LINC01339-202ENST00000518436 LINC00846Q9NV44 126 aa1.25□□□□□ -2.21
LINC01339-202ENST00000518436 KAAG1Q9UBP8 84 aa1.25□□□□□ -2.21
LINC01339-202ENST00000518436 G3V318 75 aa1.24□□□□□ -2.21
LINC01339-202ENST00000518436 RPL38P63173 70 aaKnown RBP1.24□□□□□ -2.21
LINC01339-202ENST00000518436 DEFB135Q30KP9 77 aa1.24□□□□□ -2.21
LINC01339-202ENST00000518436 UBE2DNLQ8IWF7 75 aa1.24□□□□□ -2.21
LINC01339-202ENST00000518436 KRTAP4-1Q9BYQ7 146 aa1.24□□□□□ -2.21
LINC01339-202ENST00000518436 LINC00472Q9H8W2 130 aa1.24□□□□□ -2.21
LINC01339-202ENST00000518436 FAT3Q8TDW7 4589 aa1.23□□□□□ -2.21
LINC01339-202ENST00000518436 PKHD1L1Q86WI1 4243 aa1.23□□□□□ -2.21
LINC01339-202ENST00000518436 LELP1Q5T871 98 aa1.23□□□□□ -2.21
LINC01339-202ENST00000518436 MINOS1Q5TGZ0 78 aa1.23□□□□□ -2.21
LINC01339-202ENST00000518436 TMEM263Q8WUH6 116 aaKnown RBP1.23□□□□□ -2.21
LINC01339-202ENST00000518436 NMBP08949 121 aa1.22□□□□□ -2.21
LINC01339-202ENST00000518436 ETDBQ3ZM63 59 aa1.22□□□□□ -2.21
LINC01339-202ENST00000518436 DEFB104AQ8WTQ1 72 aa1.22□□□□□ -2.21
LINC01339-202ENST00000518436 S100A13Q99584 98 aa1.22□□□□□ -2.21
LINC01339-202ENST00000518436 DEFB131BA0A096LNP1 70 aa1.21□□□□□ -2.22
LINC01339-202ENST00000518436 C7orf77A4D0Y5 90 aa1.21□□□□□ -2.22
LINC01339-202ENST00000518436 CPSF4LA6NMK7 179 aaKnown RBP1.21□□□□□ -2.22
LINC01339-202ENST00000518436 ALKAL2Q6UX46 152 aa1.21□□□□□ -2.22
LINC01339-202ENST00000518436 LEAP2Q969E1 77 aa1.21□□□□□ -2.22
LINC01339-202ENST00000518436 LINC01600Q96MT4 127 aa1.21□□□□□ -2.22
LINC01339-202ENST00000518436 HIGD1BQ9P298 99 aa1.21□□□□□ -2.22
LINC01339-202ENST00000518436 LPAP08519 4548 aa1.21□□□□□ -2.22
LINC01339-202ENST00000518436 M0R3E3 92 aa1.2□□□□□ -2.22
LINC01339-202ENST00000518436 ARMS2P0C7Q2 107 aa1.2□□□□□ -2.22
LINC01339-202ENST00000518436 DEFA5Q01523 94 aa1.2□□□□□ -2.22
LINC01339-202ENST00000518436 DEFB114Q30KQ6 69 aa1.2□□□□□ -2.22
LINC01339-202ENST00000518436 C10orf95Q9H7T3 257 aa1.2□□□□□ -2.22
LINC01339-202ENST00000518436 TNXBP22105 4242 aa1.2□□□□□ -2.22
LINC01339-202ENST00000518436 HTN3P15516 51 aa1.19□□□□□ -2.22
LINC01339-202ENST00000518436 S100A3P33764 101 aa1.19□□□□□ -2.22
LINC01339-202ENST00000518436 RPS27P42677 84 aaKnown RBP1.19□□□□□ -2.22
LINC01339-202ENST00000518436 Q6JHZ5 121 aa1.19□□□□□ -2.22
LINC01339-202ENST00000518436 FAM103A1Q9BTL3 118 aaKnown RBP1.19□□□□□ -2.22
LINC01339-202ENST00000518436 F8WEM9 126 aa1.18□□□□□ -2.22
LINC01339-202ENST00000518436 H3BQF6 201 aa1.18□□□□□ -2.22
LINC01339-202ENST00000518436 ACYP1P07311 99 aa1.18□□□□□ -2.22
LINC01339-202ENST00000518436 TDRG1Q3Y452 100 aa1.18□□□□□ -2.22
LINC01339-202ENST00000518436 HEPN1Q6WQI6 88 aa1.18□□□□□ -2.22
LINC01339-202ENST00000518436 TNCP24821 2201 aa1.17□□□□□ -2.22
LINC01339-202ENST00000518436 KANTRA0A1W2PQU2 76 aa1.17□□□□□ -2.22
LINC01339-202ENST00000518436 MT1HL1P0DM35 61 aa1.17□□□□□ -2.22
LINC01339-202ENST00000518436 APELAP0DMC3 54 aa1.17□□□□□ -2.22
LINC01339-202ENST00000518436 PLGLAQ15195 96 aa1.17□□□□□ -2.22
LINC01339-202ENST00000518436 C10orf113Q5VZT2 155 aa1.17□□□□□ -2.22
LINC01339-202ENST00000518436 FCGBPQ9Y6R7 5405 aaPredicted RBP1.17□□□□□ -2.22
LINC01339-202ENST00000518436 DNAH8Q96JB1 4490 aa1.17□□□□□ -2.22
LINC01339-202ENST00000518436 A0A087WVE0 104 aa1.16□□□□□ -2.22
LINC01339-202ENST00000518436 TRBV6-1A0A0K0K1D8 114 aa1.16□□□□□ -2.22
LINC01339-202ENST00000518436 PRH1P02810 166 aa1.16□□□□□ -2.22
LINC01339-202ENST00000518436 ADIRFQ15847 76 aa1.16□□□□□ -2.22
LINC01339-202ENST00000518436 LINC00643Q86TS7 51 aa1.16□□□□□ -2.22
LINC01339-202ENST00000518436 PSENENQ9NZ42 101 aa1.16□□□□□ -2.22
LINC01339-202ENST00000518436 SPCS1Q9Y6A9 102 aa1.16□□□□□ -2.22
LINC01339-202ENST00000518436 A0A0D9SG42 100 aa1.15□□□□□ -2.23
LINC01339-202ENST00000518436 LEPROTL1O95214 131 aa1.15□□□□□ -2.23
LINC01339-202ENST00000518436 SPATA8Q6RVD6 105 aa1.15□□□□□ -2.23
LINC01339-202ENST00000518436 ST20Q9HBF5 79 aa1.15□□□□□ -2.23
LINC01339-202ENST00000518436 SYNE2Q8WXH0 6885 aaKnown RBP1.15□□□□□ -2.23
LINC01339-202ENST00000518436 D6R8Y8 96 aa1.14□□□□□ -2.23
LINC01339-202ENST00000518436 SPART-AS1P0CW21 52 aa1.14□□□□□ -2.23
LINC01339-202ENST00000518436 NMSQ5H8A3 153 aa1.14□□□□□ -2.23
LINC01339-202ENST00000518436 MUSTN1Q8IVN3 82 aa1.14□□□□□ -2.23
LINC01339-202ENST00000518436 USMG5Q96IX5 58 aa1.14□□□□□ -2.23
LINC01339-202ENST00000518436 PLAC8Q9NZF1 115 aa1.14□□□□□ -2.23
LINC01339-202ENST00000518436 H0Y9P7 68 aa1.13□□□□□ -2.23
LINC01339-202ENST00000518436 H3BUA1 57 aa1.13□□□□□ -2.23
LINC01339-202ENST00000518436 NDUFA3O95167 84 aa1.13□□□□□ -2.23
LINC01339-202ENST00000518436 DEFB131AP59861 70 aa1.13□□□□□ -2.23
LINC01339-202ENST00000518436 TTTY10Q9BZA0 68 aa1.13□□□□□ -2.23
LINC01339-202ENST00000518436 DEFB130BP0DP73 79 aa1.12□□□□□ -2.23
LINC01339-202ENST00000518436 DEFB130AP0DP74 79 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms