RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 DEFB131BA0A096LNP1 70 aa-5.13□□□□□ -3.23
RNU6-542P-201ENST00000516405 FCER1GP30273 86 aa-5.13□□□□□ -3.23
RNU6-542P-201ENST00000516405 TTTY10Q9BZA0 68 aa-5.13□□□□□ -3.23
RNU6-542P-201ENST00000516405 A0A1B0GV72 72 aa-5.14□□□□□ -3.23
RNU6-542P-201ENST00000516405 ETDBQ3ZM63 59 aa-5.14□□□□□ -3.23
RNU6-542P-201ENST00000516405 TSTD1Q8NFU3 115 aa-5.14□□□□□ -3.23
RNU6-542P-201ENST00000516405 ARHGAP5Q13017 1502 aa-5.14□□□□□ -3.23
RNU6-542P-201ENST00000516405 MEIG1Q5JSS6 88 aa-5.15□□□□□ -3.23
RNU6-542P-201ENST00000516405 C6orf48Q9UBA6 75 aa-5.15□□□□□ -3.23
RNU6-542P-201ENST00000516405 G0S2P27469 103 aa-5.16□□□□□ -3.24
RNU6-542P-201ENST00000516405 MYOM2P54296 1465 aa-5.16□□□□□ -3.24
RNU6-542P-201ENST00000516405 hADV29S1A0JD25 119 aa-5.17□□□□□ -3.24
RNU6-542P-201ENST00000516405 CRIP1P50238 77 aa-5.17□□□□□ -3.24
RNU6-542P-201ENST00000516405 ACBD7Q8N6N7 88 aa-5.17□□□□□ -3.24
RNU6-542P-201ENST00000516405 C20orf78Q9BR46 151 aa-5.17□□□□□ -3.24
RNU6-542P-201ENST00000516405 MYO5CQ9NQX4 1742 aa-5.17□□□□□ -3.24
RNU6-542P-201ENST00000516405 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-5.18□□□□□ -3.24
RNU6-542P-201ENST00000516405 TSTD3H0UI37 97 aa-5.18□□□□□ -3.24
RNU6-542P-201ENST00000516405 MPC2O95563 127 aa-5.18□□□□□ -3.24
RNU6-542P-201ENST00000516405 KRTDAPP60985 99 aa-5.18□□□□□ -3.24
RNU6-542P-201ENST00000516405 DDA1Q9BW61 102 aa-5.18□□□□□ -3.24
RNU6-542P-201ENST00000516405 INO80Q9ULG1 1556 aaPredicted RBP-5.19□□□□□ -3.24
RNU6-542P-201ENST00000516405 FAM24AA6NFZ4 105 aa-5.19□□□□□ -3.24
RNU6-542P-201ENST00000516405 BRCA2P51587 3418 aa-5.2□□□□□ -3.24
RNU6-542P-201ENST00000516405 NDUFA4O00483 81 aa-5.2□□□□□ -3.24
RNU6-542P-201ENST00000516405 KRTAP19-2Q3LHN2 52 aa-5.2□□□□□ -3.24
RNU6-542P-201ENST00000516405 CLASP1Q7Z460 1538 aa-5.21□□□□□ -3.24
RNU6-542P-201ENST00000516405 CKS1BP61024 79 aa-5.21□□□□□ -3.24
RNU6-542P-201ENST00000516405 KTN1Q86UP2 1357 aaKnown RBP-5.21□□□□□ -3.24
RNU6-542P-201ENST00000516405 VPS13AQ96RL7 3174 aa-5.22□□□□□ -3.24
RNU6-542P-201ENST00000516405 PLGLAQ15195 96 aa-5.22□□□□□ -3.25
RNU6-542P-201ENST00000516405 PFDN5Q99471 154 aa-5.22□□□□□ -3.25
RNU6-542P-201ENST00000516405 CLTCQ00610 1675 aaKnown RBP-5.22□□□□□ -3.25
RNU6-542P-201ENST00000516405 RPL13AP3Q6NVV1 102 aa-5.23□□□□□ -3.25
RNU6-542P-201ENST00000516405 PAIP2BQ9ULR5 123 aaKnown RBP-5.23□□□□□ -3.25
RNU6-542P-201ENST00000516405 ROCK2O75116 1388 aaKnown RBP-5.24□□□□□ -3.25
RNU6-542P-201ENST00000516405 GNG10P50151 68 aa-5.24□□□□□ -3.25
RNU6-542P-201ENST00000516405 ZNF720Q7Z2F6 126 aa-5.24□□□□□ -3.25
RNU6-542P-201ENST00000516405 SPANXA1Q9NS26 97 aa-5.24□□□□□ -3.25
RNU6-542P-201ENST00000516405 CYB5AP00167 134 aa-5.25□□□□□ -3.25
RNU6-542P-201ENST00000516405 ARPC4P59998 168 aa-5.25□□□□□ -3.25
RNU6-542P-201ENST00000516405 CENPHQ9H3R5 247 aa-5.25□□□□□ -3.25
RNU6-542P-201ENST00000516405 MRPL33O75394 65 aaKnown RBP-5.26□□□□□ -3.25
RNU6-542P-201ENST00000516405 H3BQ15 152 aa-5.27□□□□□ -3.25
RNU6-542P-201ENST00000516405 NBEAP1P0C6P0 100 aa-5.27□□□□□ -3.25
RNU6-542P-201ENST00000516405 IFI27P40305 119 aaPredicted RBP-5.27□□□□□ -3.25
RNU6-542P-201ENST00000516405 E5RI56 91 aa-5.28□□□□□ -3.25
RNU6-542P-201ENST00000516405 CCDC88BA6NC98 1476 aa-5.28□□□□□ -3.25
RNU6-542P-201ENST00000516405 UNC13AQ9UPW8 1703 aa-5.28□□□□□ -3.26
RNU6-542P-201ENST00000516405 NDUFB1O75438 58 aa-5.3□□□□□ -3.26
RNU6-542P-201ENST00000516405 CHMP6Q96FZ7 201 aa-5.3□□□□□ -3.26
RNU6-542P-201ENST00000516405 LZICQ8WZA0 190 aa-5.31□□□□□ -3.26
RNU6-542P-201ENST00000516405 NRXN3Q9Y4C0 1643 aa-5.31□□□□□ -3.26
RNU6-542P-201ENST00000516405 NHSQ6T4R5 1651 aa-5.32□□□□□ -3.26
RNU6-542P-201ENST00000516405 CFAP43Q8NDM7 1665 aa-5.32□□□□□ -3.26
RNU6-542P-201ENST00000516405 ANKRD26Q9UPS8 1709 aa-5.34□□□□□ -3.26
RNU6-542P-201ENST00000516405 NAIPQ13075 1403 aa-5.34□□□□□ -3.26
RNU6-542P-201ENST00000516405 ARHGAP35Q9NRY4 1499 aa-5.34□□□□□ -3.26
RNU6-542P-201ENST00000516405 NRKQ7Z2Y5 1582 aa-5.34□□□□□ -3.26
RNU6-542P-201ENST00000516405 C20orf202A1L168 122 aa-5.35□□□□□ -3.27
RNU6-542P-201ENST00000516405 FAM25AB3EWG3 89 aa-5.35□□□□□ -3.27
RNU6-542P-201ENST00000516405 FAM25CB3EWG5 89 aa-5.35□□□□□ -3.27
RNU6-542P-201ENST00000516405 FAM25GB3EWG6 89 aa-5.35□□□□□ -3.27
RNU6-542P-201ENST00000516405 KCNQ1DNQ9H478 68 aa-5.35□□□□□ -3.27
RNU6-542P-201ENST00000516405 LINC00032P0C843 101 aa-5.36□□□□□ -3.27
RNU6-542P-201ENST00000516405 KAAG1Q9UBP8 84 aa-5.36□□□□□ -3.27
RNU6-542P-201ENST00000516405 NALCNQ8IZF0 1738 aa-5.37□□□□□ -3.27
RNU6-542P-201ENST00000516405 UACAQ9BZF9 1416 aa-5.37□□□□□ -3.27
RNU6-542P-201ENST00000516405 UMAD1C9J7I0 102 aa-5.37□□□□□ -3.27
RNU6-542P-201ENST00000516405 EPRSP07814 1512 aaKnown RBP-5.38□□□□□ -3.27
RNU6-542P-201ENST00000516405 S100A8P05109 93 aa-5.39□□□□□ -3.27
RNU6-542P-201ENST00000516405 HMGN2P05204 90 aaKnown RBP-5.39□□□□□ -3.27
RNU6-542P-201ENST00000516405 FABP1P07148 127 aa-5.39□□□□□ -3.27
RNU6-542P-201ENST00000516405 HFM1A2PYH4 1435 aa-5.4□□□□□ -3.27
RNU6-542P-201ENST00000516405 GNG7O60262 68 aa-5.4□□□□□ -3.27
RNU6-542P-201ENST00000516405 POLR2KP53803 58 aaKnown RBP-5.4□□□□□ -3.27
RNU6-542P-201ENST00000516405 AKAP12Q02952 1782 aa-5.4□□□□□ -3.27
RNU6-542P-201ENST00000516405 SVBPQ8N300 66 aa-5.41□□□□□ -3.28
RNU6-542P-201ENST00000516405 LINC00470Q9BZP3 86 aa-5.41□□□□□ -3.28
RNU6-542P-201ENST00000516405 URB2Q14146 1524 aaKnown RBP-5.42□□□□□ -3.28
RNU6-542P-201ENST00000516405 FANCAO15360 1455 aa-5.42□□□□□ -3.28
RNU6-542P-201ENST00000516405 GNGT2O14610 69 aa-5.42□□□□□ -3.28
RNU6-542P-201ENST00000516405 AKAIN1P0CW23 69 aa-5.42□□□□□ -3.28
RNU6-542P-201ENST00000516405 SMIM15Q7Z3B0 74 aa-5.42□□□□□ -3.28
RNU6-542P-201ENST00000516405 UBL5Q9BZL1 73 aa-5.42□□□□□ -3.28
RNU6-542P-201ENST00000516405 MYO3AQ8NEV4 1616 aa-5.44□□□□□ -3.28
RNU6-542P-201ENST00000516405 UQCRHLA0A096LP55 91 aa-5.44□□□□□ -3.28
RNU6-542P-201ENST00000516405 SELENOWP63302 87 aa-5.44□□□□□ -3.28
RNU6-542P-201ENST00000516405 TTC37Q6PGP7 1564 aa-5.45□□□□□ -3.28
RNU6-542P-201ENST00000516405 NREPQ16612 68 aa-5.45□□□□□ -3.28
RNU6-542P-201ENST00000516405 DPY30Q9C005 99 aa-5.45□□□□□ -3.28
RNU6-542P-201ENST00000516405 ATOX1O00244 68 aa-5.47□□□□□ -3.29
RNU6-542P-201ENST00000516405 PMCHL2Q9BQD1 86 aa-5.47□□□□□ -3.29
RNU6-542P-201ENST00000516405 ABRACLQ9P1F3 81 aa-5.47□□□□□ -3.29
RNU6-542P-201ENST00000516405 PYDC1Q8WXC3 89 aa-5.48□□□□□ -3.29
RNU6-542P-201ENST00000516405 FAM107BQ9H098 131 aa-5.48□□□□□ -3.29
RNU6-542P-201ENST00000516405 C3P01024 1663 aa-5.49□□□□□ -3.29
RNU6-542P-201ENST00000516405 PZPP20742 1482 aa-5.49□□□□□ -3.29
RNU6-542P-201ENST00000516405 GNG14A0A1W2PPG7 69 aa-5.49□□□□□ -3.29
RNU6-542P-201ENST00000516405 IER3IP1Q9Y5U9 82 aa-5.49□□□□□ -3.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms