RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 UBE2L5PA0A1B0GUS4 154 aa0.72□□□□□ -2.29
LINC01088-211ENST00000515597 TCRBV3S1A0A5B6 114 aa0.72□□□□□ -2.29
LINC01088-211ENST00000515597 TMEM262E9PQX1 116 aa0.72□□□□□ -2.29
LINC01088-211ENST00000515597 SSSCA1O60232 199 aa0.72□□□□□ -2.29
LINC01088-211ENST00000515597 SPINK8P0C7L1 97 aa0.72□□□□□ -2.29
LINC01088-211ENST00000515597 IGLC2P0DOY2 106 aa0.72□□□□□ -2.29
LINC01088-211ENST00000515597 RNASE3P12724 160 aaKnown RBP0.72□□□□□ -2.29
LINC01088-211ENST00000515597 FXYD4P59646 89 aa0.72□□□□□ -2.29
LINC01088-211ENST00000515597 UBE2L3P68036 154 aaKnown RBP0.72□□□□□ -2.29
LINC01088-211ENST00000515597 MIR22HGQ0VDD5 57 aa0.72□□□□□ -2.29
LINC01088-211ENST00000515597 NMSQ5H8A3 153 aa0.72□□□□□ -2.29
LINC01088-211ENST00000515597 C5orf17Q8NAS9 161 aa0.72□□□□□ -2.29
LINC01088-211ENST00000515597 FXYD6Q9H0Q3 95 aa0.72□□□□□ -2.29
LINC01088-211ENST00000515597 ATG5Q9H1Y0 275 aa0.72□□□□□ -2.29
LINC01088-211ENST00000515597 SYNE1Q8NF91 8797 aaKnown RBP0.72□□□□□ -2.29
LINC01088-211ENST00000515597 A0A087WWC5 75 aa0.71□□□□□ -2.3
LINC01088-211ENST00000515597 SNRPGP15A8MWD9 76 aa0.71□□□□□ -2.3
LINC01088-211ENST00000515597 CCL25O15444 150 aa0.71□□□□□ -2.3
LINC01088-211ENST00000515597 DNAL4O96015 105 aa0.71□□□□□ -2.3
LINC01088-211ENST00000515597 IL7P13232 177 aa0.71□□□□□ -2.3
LINC01088-211ENST00000515597 SNCAP37840 140 aa0.71□□□□□ -2.3
LINC01088-211ENST00000515597 KRTDAPP60985 99 aa0.71□□□□□ -2.3
LINC01088-211ENST00000515597 IQCJQ1A5X6 159 aa0.71□□□□□ -2.3
LINC01088-211ENST00000515597 S100A7L2Q5SY68 101 aa0.71□□□□□ -2.3
LINC01088-211ENST00000515597 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.71□□□□□ -2.3
LINC01088-211ENST00000515597 C5orf38Q86SI9 138 aa0.71□□□□□ -2.3
LINC01088-211ENST00000515597 DMAC1Q96GE9 116 aa0.71□□□□□ -2.3
LINC01088-211ENST00000515597 TMEM141Q96I45 108 aa0.71□□□□□ -2.3
LINC01088-211ENST00000515597 TRGV9Q99603 122 aa0.71□□□□□ -2.3
LINC01088-211ENST00000515597 VAMP8Q9BV40 100 aa0.71□□□□□ -2.3
LINC01088-211ENST00000515597 NPVFQ9HCQ7 196 aa0.71□□□□□ -2.3
LINC01088-211ENST00000515597 LINC00474Q9P2X8 69 aa0.71□□□□□ -2.3
LINC01088-211ENST00000515597 TRAV23DV6A0A075B6W5 121 aa0.7□□□□□ -2.3
LINC01088-211ENST00000515597 TRAV13-2A0A0B4J235 113 aa0.7□□□□□ -2.3
LINC01088-211ENST00000515597 NAP1L6A6NFF2 107 aa0.7□□□□□ -2.3
LINC01088-211ENST00000515597 JMJD7-PLA2G4BH0Y9G9 81 aa0.7□□□□□ -2.3
LINC01088-211ENST00000515597 UBE2G1P62253 170 aa0.7□□□□□ -2.3
LINC01088-211ENST00000515597 CYP2G1PQ6ZSU1 146 aa0.7□□□□□ -2.3
LINC01088-211ENST00000515597 Q86TA4 180 aa0.7□□□□□ -2.3
LINC01088-211ENST00000515597 PPP1R1CQ8WVI7 109 aa0.7□□□□□ -2.3
LINC01088-211ENST00000515597 DSCR8Q96T75 97 aa0.7□□□□□ -2.3
LINC01088-211ENST00000515597 SNHG12Q9BXW3 62 aa0.7□□□□□ -2.3
LINC01088-211ENST00000515597 CDC42SE1Q9NRR8 79 aa0.7□□□□□ -2.3
LINC01088-211ENST00000515597 TMEM14CQ9P0S9 112 aa0.7□□□□□ -2.3
LINC01088-211ENST00000515597 NDUFA12Q9UI09 145 aa0.7□□□□□ -2.3
LINC01088-211ENST00000515597 SCP2D1Q9UJQ7 156 aa0.7□□□□□ -2.3
LINC01088-211ENST00000515597 CRYM-AS1A6NIL9 109 aa0.69□□□□□ -2.3
LINC01088-211ENST00000515597 ATOX1O00244 68 aa0.69□□□□□ -2.3
LINC01088-211ENST00000515597 NUPR1O60356 82 aa0.69□□□□□ -2.3
LINC01088-211ENST00000515597 IGKCP01834 107 aa0.69□□□□□ -2.3
LINC01088-211ENST00000515597 NMBP08949 121 aa0.69□□□□□ -2.3
LINC01088-211ENST00000515597 SLC25A6P12236 298 aa0.69□□□□□ -2.3
LINC01088-211ENST00000515597 MT1XP80297 61 aa0.69□□□□□ -2.3
LINC01088-211ENST00000515597 RBM3P98179 157 aaKnown RBP0.69□□□□□ -2.3
LINC01088-211ENST00000515597 FAM74A4Q5TZK3 123 aa0.69□□□□□ -2.3
LINC01088-211ENST00000515597 SPAG11AQ6PDA7 123 aa0.69□□□□□ -2.3
LINC01088-211ENST00000515597 C9orf62Q8N4C0 152 aa0.69□□□□□ -2.3
LINC01088-211ENST00000515597 Q8N8P6 123 aa0.69□□□□□ -2.3
LINC01088-211ENST00000515597 SPTSSBQ8NFR3 76 aa0.69□□□□□ -2.3
LINC01088-211ENST00000515597 MGST2Q99735 147 aa0.69□□□□□ -2.3
LINC01088-211ENST00000515597 PMCHL2Q9BQD1 86 aa0.69□□□□□ -2.3
LINC01088-211ENST00000515597 CYP4F30PQ9H0H9 118 aa0.69□□□□□ -2.3
LINC01088-211ENST00000515597 MRPL35Q9NZE8 188 aaKnown RBP0.69□□□□□ -2.3
LINC01088-211ENST00000515597 UQCR10Q9UDW1 63 aa0.69□□□□□ -2.3
LINC01088-211ENST00000515597 UBE2D4Q9Y2X8 147 aa0.69□□□□□ -2.3
LINC01088-211ENST00000515597 C22orf24Q9Y442 160 aa0.69□□□□□ -2.3
LINC01088-211ENST00000515597 TEX49A0A1B0GTD5 131 aa0.68□□□□□ -2.3
LINC01088-211ENST00000515597 HIGD1CA8MV81 97 aa0.68□□□□□ -2.3
LINC01088-211ENST00000515597 GNGT2O14610 69 aa0.68□□□□□ -2.3
LINC01088-211ENST00000515597 NDUFC1O43677 76 aa0.68□□□□□ -2.3
LINC01088-211ENST00000515597 BCE1O60756 84 aa0.68□□□□□ -2.3
LINC01088-211ENST00000515597 MPC2O95563 127 aa0.68□□□□□ -2.3
LINC01088-211ENST00000515597 CFDP00746 253 aaPredicted RBP0.68□□□□□ -2.3
LINC01088-211ENST00000515597 SPATA45Q537H7 98 aa0.68□□□□□ -2.3
LINC01088-211ENST00000515597 LIMD2Q9BT23 127 aa0.68□□□□□ -2.3
LINC01088-211ENST00000515597 C6orf48Q9UBA6 75 aa0.68□□□□□ -2.3
LINC01088-211ENST00000515597 TRBV7-3A0A075B6L6 115 aa0.67□□□□□ -2.3
LINC01088-211ENST00000515597 TRBV6-1A0A0K0K1D8 114 aa0.67□□□□□ -2.3
LINC01088-211ENST00000515597 INE1O15225 51 aa0.67□□□□□ -2.3
LINC01088-211ENST00000515597 SPINK1P00995 79 aa0.67□□□□□ -2.3
LINC01088-211ENST00000515597 CCKP06307 115 aa0.67□□□□□ -2.3
LINC01088-211ENST00000515597 COX6CP09669 75 aa0.67□□□□□ -2.3
LINC01088-211ENST00000515597 PDE6GP18545 87 aa0.67□□□□□ -2.3
LINC01088-211ENST00000515597 ELOF1P60002 83 aaKnown RBP0.67□□□□□ -2.3
LINC01088-211ENST00000515597 PRLHP81277 87 aa0.67□□□□□ -2.3
LINC01088-211ENST00000515597 SSBP1Q04837 148 aaKnown RBP0.67□□□□□ -2.3
LINC01088-211ENST00000515597 CSAG1Q6PB30 78 aa0.67□□□□□ -2.3
LINC01088-211ENST00000515597 DEFB107AQ8IZN7 70 aa0.67□□□□□ -2.3
LINC01088-211ENST00000515597 IFI27L1Q96BM0 104 aa0.67□□□□□ -2.3
LINC01088-211ENST00000515597 MANBALQ9NQG1 85 aa0.67□□□□□ -2.3
LINC01088-211ENST00000515597 CEBPZOSA8MTT3 80 aa0.66□□□□□ -2.3
LINC01088-211ENST00000515597 HCG22E2RYF7 251 aa0.66□□□□□ -2.3
LINC01088-211ENST00000515597 SIX6O95475 246 aa0.66□□□□□ -2.3
LINC01088-211ENST00000515597 MT-ATP8P03928 68 aa0.66□□□□□ -2.3
LINC01088-211ENST00000515597 SEC11AP67812 179 aa0.66□□□□□ -2.3
LINC01088-211ENST00000515597 PEA15Q15121 130 aa0.66□□□□□ -2.3
LINC01088-211ENST00000515597 Q5VV11 94 aa0.66□□□□□ -2.3
LINC01088-211ENST00000515597 FAM167A-AS1Q96KT0 104 aa0.66□□□□□ -2.3
LINC01088-211ENST00000515597 SPRR4Q96PI1 79 aa0.66□□□□□ -2.3
LINC01088-211ENST00000515597 SPRR2GQ9BYE4 73 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms