RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 SMCR5Q8TEV8 140 aa2.17□□□□□ -2.06
HERC6-208ENST00000515365 UBL5Q9BZL1 73 aa2.17□□□□□ -2.06
HERC6-208ENST00000515365 WFDC10AQ9H1F0 79 aa2.17□□□□□ -2.06
HERC6-208ENST00000515365 KCNQ1DNQ9H478 68 aa2.17□□□□□ -2.06
HERC6-208ENST00000515365 LINC00846Q9NV44 126 aa2.17□□□□□ -2.06
HERC6-208ENST00000515365 VPS13BQ7Z7G8 4022 aa2.16□□□□□ -2.06
HERC6-208ENST00000515365 PKHD1L1Q86WI1 4243 aa2.16□□□□□ -2.06
HERC6-208ENST00000515365 IGLV5-48A0A075B6I7 105 aa2.16□□□□□ -2.06
HERC6-208ENST00000515365 ERC2-IT1O76042 136 aa2.16□□□□□ -2.06
HERC6-208ENST00000515365 NPC2P61916 151 aa2.16□□□□□ -2.06
HERC6-208ENST00000515365 SPAG11BQ08648 103 aa2.16□□□□□ -2.06
HERC6-208ENST00000515365 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
HERC6-208ENST00000515365 UNQ6190/PRO20217Q6UXQ8 127 aa2.16□□□□□ -2.06
HERC6-208ENST00000515365 OR13C6PQ8NH95 151 aa2.16□□□□□ -2.06
HERC6-208ENST00000515365 UPK3BQ9BT76 320 aa2.16□□□□□ -2.06
HERC6-208ENST00000515365 FAM236AA0A1B0GUQ0 79 aa2.15□□□□□ -2.07
HERC6-208ENST00000515365 FAM236BA0A1B0GV22 79 aa2.15□□□□□ -2.07
HERC6-208ENST00000515365 NDUFC1O43677 76 aa2.15□□□□□ -2.07
HERC6-208ENST00000515365 ZNF73O43830 326 aaPredicted RBP2.15□□□□□ -2.07
HERC6-208ENST00000515365 SPRR1AP35321 89 aa2.15□□□□□ -2.07
HERC6-208ENST00000515365 TMEM258P61165 79 aa2.15□□□□□ -2.07
HERC6-208ENST00000515365 DIRC1Q969H9 104 aa2.15□□□□□ -2.07
HERC6-208ENST00000515365 DSCR8Q96T75 97 aa2.15□□□□□ -2.07
HERC6-208ENST00000515365 C6orf48Q9UBA6 75 aa2.15□□□□□ -2.07
HERC6-208ENST00000515365 R4GN34 69 aa2.15□□□□□ -2.07
HERC6-208ENST00000515365 LRP1BQ9NZR2 4599 aa2.14□□□□□ -2.07
HERC6-208ENST00000515365 TRAV7A0A075B6U4 112 aa2.14□□□□□ -2.07
HERC6-208ENST00000515365 TRAV23DV6A0A075B6W5 121 aa2.14□□□□□ -2.07
HERC6-208ENST00000515365 CCDC179H3BU77 68 aa2.14□□□□□ -2.07
HERC6-208ENST00000515365 COX7BP24311 80 aa2.14□□□□□ -2.07
HERC6-208ENST00000515365 KLKP1Q107X0 134 aa2.14□□□□□ -2.07
HERC6-208ENST00000515365 DEFB135Q30KP9 77 aa2.14□□□□□ -2.07
HERC6-208ENST00000515365 C14orf132Q9NPU4 83 aa2.14□□□□□ -2.07
HERC6-208ENST00000515365 PKIGQ9Y2B9 76 aa2.14□□□□□ -2.07
HERC6-208ENST00000515365 DNAH5Q8TE73 4624 aa2.14□□□□□ -2.07
HERC6-208ENST00000515365 FCGBPQ9Y6R7 5405 aaPredicted RBP2.13□□□□□ -2.07
HERC6-208ENST00000515365 IGKV3OR2-268A0A0C4DH90 116 aa2.13□□□□□ -2.07
HERC6-208ENST00000515365 A6NED7 52 aa2.13□□□□□ -2.07
HERC6-208ENST00000515365 NCR3O14931 201 aa2.13□□□□□ -2.07
HERC6-208ENST00000515365 ESRGQ1W209 222 aa2.13□□□□□ -2.07
HERC6-208ENST00000515365 FAM19A5Q7Z5A7 132 aaPredicted RBP2.13□□□□□ -2.07
HERC6-208ENST00000515365 Q8NDZ9 215 aa2.13□□□□□ -2.07
HERC6-208ENST00000515365 LCE3DQ9BYE3 92 aa2.13□□□□□ -2.07
HERC6-208ENST00000515365 LRP1Q07954 4544 aaKnown RBP2.12□□□□□ -2.07
HERC6-208ENST00000515365 KMT2DO14686 5537 aa2.12□□□□□ -2.07
HERC6-208ENST00000515365 TRAV10A0A0B4J240 114 aa2.12□□□□□ -2.07
HERC6-208ENST00000515365 KRTAP10-8P60410 259 aa2.12□□□□□ -2.07
HERC6-208ENST00000515365 C9orf153Q5TBE3 101 aa2.12□□□□□ -2.07
HERC6-208ENST00000515365 Q6ZQY7 126 aa2.12□□□□□ -2.07
HERC6-208ENST00000515365 Q6ZRU5 148 aa2.12□□□□□ -2.07
HERC6-208ENST00000515365 SPRR4Q96PI1 79 aa2.12□□□□□ -2.07
HERC6-208ENST00000515365 TM2D3Q9BRN9 247 aa2.12□□□□□ -2.07
HERC6-208ENST00000515365 LINC00588Q9Y4M8 146 aa2.12□□□□□ -2.07
HERC6-208ENST00000515365 DNAH17Q9UFH2 4485 aa2.11□□□□□ -2.07
HERC6-208ENST00000515365 FAT3Q8TDW7 4589 aa2.11□□□□□ -2.07
HERC6-208ENST00000515365 IGLV10-54A0A075B6I4 117 aa2.11□□□□□ -2.07
HERC6-208ENST00000515365 DEFB131BA0A096LNP1 70 aa2.11□□□□□ -2.07
HERC6-208ENST00000515365 HRES1P13985 223 aa2.11□□□□□ -2.07
HERC6-208ENST00000515365 ATP5EP56381 51 aaPredicted RBP2.11□□□□□ -2.07
HERC6-208ENST00000515365 CNBPP62633 177 aaKnown RBP2.11□□□□□ -2.07
HERC6-208ENST00000515365 KRTAP25-1Q3LHN0 102 aa2.11□□□□□ -2.07
HERC6-208ENST00000515365 C9orf116Q5BN46 136 aaPredicted RBP2.11□□□□□ -2.07
HERC6-208ENST00000515365 DPH3Q96FX2 82 aa2.11□□□□□ -2.07
HERC6-208ENST00000515365 LAMTOR3Q9UHA4 124 aa2.11□□□□□ -2.07
HERC6-208ENST00000515365 J3KT08 172 aa2.1□□□□□ -2.07
HERC6-208ENST00000515365 LY6G6CO95867 125 aa2.1□□□□□ -2.07
HERC6-208ENST00000515365 SPRR1BP22528 89 aa2.1□□□□□ -2.07
HERC6-208ENST00000515365 RPL37AP61513 92 aaKnown RBP2.1□□□□□ -2.07
HERC6-208ENST00000515365 Q6ZRX8 168 aa2.1□□□□□ -2.07
HERC6-208ENST00000515365 WFDC10BQ8IUB3 73 aa2.1□□□□□ -2.07
HERC6-208ENST00000515365 MUC12Q9UKN1 5478 aa2.1□□□□□ -2.07
HERC6-208ENST00000515365 IGKV3D-7A0A0C4DH55 119 aa2.09□□□□□ -2.07
HERC6-208ENST00000515365 A0A1B0GU33 70 aa2.09□□□□□ -2.07
HERC6-208ENST00000515365 DEFB4AO15263 64 aa2.09□□□□□ -2.07
HERC6-208ENST00000515365 FUSP35637 526 aaKnown RBP eCLIP2.09□□□□□ -2.07
HERC6-208ENST00000515365 NREPQ16612 68 aa2.09□□□□□ -2.07
HERC6-208ENST00000515365 CLPSL2Q6UWE3 100 aa2.09□□□□□ -2.07
HERC6-208ENST00000515365 LINC00304Q8N9R0 145 aa2.09□□□□□ -2.07
HERC6-208ENST00000515365 XAGE1AQ9HD64 81 aa2.09□□□□□ -2.07
HERC6-208ENST00000515365 LINC00474Q9P2X8 69 aa2.09□□□□□ -2.07
HERC6-208ENST00000515365 SS18L2Q9UHA2 77 aa2.09□□□□□ -2.07
HERC6-208ENST00000515365 H7BZZ5 65 aa2.08□□□□□ -2.08
HERC6-208ENST00000515365 KRTAP10-10P60014 251 aa2.08□□□□□ -2.08
HERC6-208ENST00000515365 SERP1Q9Y6X1 66 aa2.08□□□□□ -2.08
HERC6-208ENST00000515365 A0A1W2PNN7 141 aa2.07□□□□□ -2.08
HERC6-208ENST00000515365 H3BPC8 53 aa2.07□□□□□ -2.08
HERC6-208ENST00000515365 HTN3P15516 51 aa2.07□□□□□ -2.08
HERC6-208ENST00000515365 LINC00313P59037 77 aa2.07□□□□□ -2.08
HERC6-208ENST00000515365 HAMPP81172 84 aa2.07□□□□□ -2.08
HERC6-208ENST00000515365 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
HERC6-208ENST00000515365 A0A087WVE0 104 aa2.06□□□□□ -2.08
HERC6-208ENST00000515365 IGKV2-24A0A0C4DH68 120 aa2.06□□□□□ -2.08
HERC6-208ENST00000515365 ETDCA0A1B0GVM5 59 aa2.06□□□□□ -2.08
HERC6-208ENST00000515365 NDUFB1O75438 58 aa2.06□□□□□ -2.08
HERC6-208ENST00000515365 IGKV4-1P06312 121 aa2.06□□□□□ -2.08
HERC6-208ENST00000515365 SCXQ7RTU7 201 aa2.06□□□□□ -2.08
HERC6-208ENST00000515365 C9orf163Q8N9P6 203 aa2.06□□□□□ -2.08
HERC6-208ENST00000515365 Q9BRP9 147 aa2.06□□□□□ -2.08
HERC6-208ENST00000515365 A0A1W2PNM2 257 aa2.05□□□□□ -2.08
HERC6-208ENST00000515365 M0R2N4 97 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms