RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 IGFL1Q6UW32 110 aa3.65□□□□□ -1.83
NPHP3-211ENST00000515289 C14orf132Q9NPU4 83 aa3.65□□□□□ -1.83
NPHP3-211ENST00000515289 IGKV2-24A0A0C4DH68 120 aa3.64□□□□□ -1.83
NPHP3-211ENST00000515289 SNCGO76070 127 aa3.64□□□□□ -1.83
NPHP3-211ENST00000515289 ACYP1P07311 99 aa3.64□□□□□ -1.83
NPHP3-211ENST00000515289 CRYGAP11844 174 aa3.64□□□□□ -1.83
NPHP3-211ENST00000515289 Q6ZRX8 168 aa3.64□□□□□ -1.83
NPHP3-211ENST00000515289 Q9BRP9 147 aa3.64□□□□□ -1.83
NPHP3-211ENST00000515289 JMJD7-PLA2G4BH0Y9G9 81 aa3.63□□□□□ -1.83
NPHP3-211ENST00000515289 Q5XG85 94 aa3.63□□□□□ -1.83
NPHP3-211ENST00000515289 Q6ZQT0 140 aa3.63□□□□□ -1.83
NPHP3-211ENST00000515289 LOC110117498A0A087WWA1 95 aa3.62□□□□□ -1.83
NPHP3-211ENST00000515289 ETDCA0A1B0GVM5 59 aa3.62□□□□□ -1.83
NPHP3-211ENST00000515289 ERC2-IT1O76042 136 aa3.62□□□□□ -1.83
NPHP3-211ENST00000515289 CCKP06307 115 aa3.62□□□□□ -1.83
NPHP3-211ENST00000515289 SPACA4Q8TDM5 124 aa3.62□□□□□ -1.83
NPHP3-211ENST00000515289 KMT2AQ03164 3969 aa3.61□□□□□ -1.83
NPHP3-211ENST00000515289 TENM2Q9NT68 2774 aa3.61□□□□□ -1.83
NPHP3-211ENST00000515289 IGLV5-48A0A075B6I7 105 aa3.61□□□□□ -1.83
NPHP3-211ENST00000515289 TRBV7-4A0A0J9YYF1 115 aa3.61□□□□□ -1.83
NPHP3-211ENST00000515289 LY6G6CO95867 125 aa3.61□□□□□ -1.83
NPHP3-211ENST00000515289 C1orf134Q5TEV5 83 aa3.61□□□□□ -1.83
NPHP3-211ENST00000515289 LINC00846Q9NV44 126 aa3.61□□□□□ -1.83
NPHP3-211ENST00000515289 DNAH11Q96DT5 4516 aa3.61□□□□□ -1.83
NPHP3-211ENST00000515289 TRBV7-7A0A0K0K1E9 115 aa3.6□□□□□ -1.83
NPHP3-211ENST00000515289 RBM3P98179 157 aaKnown RBP3.6□□□□□ -1.83
NPHP3-211ENST00000515289 LINC00643Q86TS7 51 aa3.6□□□□□ -1.83
NPHP3-211ENST00000515289 LINC00474Q9P2X8 69 aa3.6□□□□□ -1.83
NPHP3-211ENST00000515289 TMEM258P61165 79 aa3.59□□□□□ -1.83
NPHP3-211ENST00000515289 KRTAP13-1Q8IUC0 172 aa3.59□□□□□ -1.83
NPHP3-211ENST00000515289 PRO2289Q9P1D8 64 aa3.59□□□□□ -1.83
NPHP3-211ENST00000515289 DNAH8Q96JB1 4490 aa3.59□□□□□ -1.84
NPHP3-211ENST00000515289 DNAH5Q8TE73 4624 aa3.58□□□□□ -1.84
NPHP3-211ENST00000515289 PDE6GP18545 87 aa3.58□□□□□ -1.84
NPHP3-211ENST00000515289 PRLHP81277 87 aa3.58□□□□□ -1.84
NPHP3-211ENST00000515289 Q6JHZ5 121 aa3.58□□□□□ -1.84
NPHP3-211ENST00000515289 PLAC8Q9NZF1 115 aa3.58□□□□□ -1.84
NPHP3-211ENST00000515289 HECTD4Q9Y4D8 3996 aa3.57□□□□□ -1.84
NPHP3-211ENST00000515289 DSCR8Q96T75 97 aa3.57□□□□□ -1.84
NPHP3-211ENST00000515289 SACSQ9NZJ4 4579 aa3.56□□□□□ -1.84
NPHP3-211ENST00000515289 BCE1O60756 84 aa3.56□□□□□ -1.84
NPHP3-211ENST00000515289 SPRR1BP22528 89 aa3.56□□□□□ -1.84
NPHP3-211ENST00000515289 DEFB105AQ8NG35 78 aa3.56□□□□□ -1.84
NPHP3-211ENST00000515289 C20orf166-AS1Q96NR2 134 aa3.56□□□□□ -1.84
NPHP3-211ENST00000515289 FRAS1Q86XX4 4008 aa3.55□□□□□ -1.84
NPHP3-211ENST00000515289 BRK1Q8WUW1 75 aa3.55□□□□□ -1.84
NPHP3-211ENST00000515289 FAT2Q9NYQ8 4349 aa3.55□□□□□ -1.84
NPHP3-211ENST00000515289 HYDINQ4G0P3 5121 aa3.55□□□□□ -1.84
NPHP3-211ENST00000515289 IGKV3D-7A0A0C4DH55 119 aa3.54□□□□□ -1.84
NPHP3-211ENST00000515289 ATP5EP2Q5VTU8 51 aa3.54□□□□□ -1.84
NPHP3-211ENST00000515289 C7orf65Q6ZTY9 151 aa3.54□□□□□ -1.84
NPHP3-211ENST00000515289 C1orf137Q5JT78 98 aa3.53□□□□□ -1.84
NPHP3-211ENST00000515289 Q6ZSA8 131 aa3.53□□□□□ -1.84
NPHP3-211ENST00000515289 UBL5Q9BZL1 73 aa3.53□□□□□ -1.84
NPHP3-211ENST00000515289 TGP01266 2768 aa3.53□□□□□ -1.84
NPHP3-211ENST00000515289 KRTAP10-1P60331 282 aa3.52□□□□□ -1.85
NPHP3-211ENST00000515289 DPH3Q96FX2 82 aa3.52□□□□□ -1.85
NPHP3-211ENST00000515289 SPRR4Q96PI1 79 aa3.52□□□□□ -1.85
NPHP3-211ENST00000515289 LCE6AA0A183 80 aa3.51□□□□□ -1.85
NPHP3-211ENST00000515289 FAM236AA0A1B0GUQ0 79 aa3.51□□□□□ -1.85
NPHP3-211ENST00000515289 FAM236BA0A1B0GV22 79 aa3.51□□□□□ -1.85
NPHP3-211ENST00000515289 A0A087WVE0 104 aa3.5□□□□□ -1.85
NPHP3-211ENST00000515289 A0A0G2JQZ4 141 aa3.5□□□□□ -1.85
NPHP3-211ENST00000515289 F8WEM9 126 aa3.5□□□□□ -1.85
NPHP3-211ENST00000515289 LINC00304Q8N9R0 145 aa3.5□□□□□ -1.85
NPHP3-211ENST00000515289 RETNLBQ9BQ08 111 aa3.5□□□□□ -1.85
NPHP3-211ENST00000515289 DYNC1H1Q14204 4646 aaKnown RBP3.5□□□□□ -1.85
NPHP3-211ENST00000515289 RYR2Q92736 4967 aa3.5□□□□□ -1.85
NPHP3-211ENST00000515289 PKD1P98161 4303 aa3.49□□□□□ -1.85
NPHP3-211ENST00000515289 LRP1BQ9NZR2 4599 aa3.48□□□□□ -1.85
NPHP3-211ENST00000515289 ROMO1P60602 79 aa3.48□□□□□ -1.85
NPHP3-211ENST00000515289 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
NPHP3-211ENST00000515289 UQCRQO14949 82 aa3.47□□□□□ -1.85
NPHP3-211ENST00000515289 IGKV4-1P06312 121 aa3.47□□□□□ -1.85
NPHP3-211ENST00000515289 HAMPP81172 84 aa3.47□□□□□ -1.85
NPHP3-211ENST00000515289 NREPQ16612 68 aa3.47□□□□□ -1.85
NPHP3-211ENST00000515289 A0A087WSZ3 146 aa3.45□□□□□ -1.86
NPHP3-211ENST00000515289 CCDC179H3BU77 68 aa3.45□□□□□ -1.86
NPHP3-211ENST00000515289 ATOX1O00244 68 aa3.45□□□□□ -1.86
NPHP3-211ENST00000515289 P0C880 135 aa3.45□□□□□ -1.86
NPHP3-211ENST00000515289 KRTAP10-5P60370 271 aa3.45□□□□□ -1.86
NPHP3-211ENST00000515289 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
NPHP3-211ENST00000515289 RPL37AP61513 92 aaKnown RBP3.44□□□□□ -1.86
NPHP3-211ENST00000515289 TPRXLQ17RH7 258 aa3.44□□□□□ -1.86
NPHP3-211ENST00000515289 C9orf153Q5TBE3 101 aa3.43□□□□□ -1.86
NPHP3-211ENST00000515289 LINC00472Q9H8W2 130 aa3.43□□□□□ -1.86
NPHP3-211ENST00000515289 APOBP04114 4563 aaKnown RBP3.43□□□□□ -1.86
NPHP3-211ENST00000515289 COX7CP15954 63 aa3.42□□□□□ -1.86
NPHP3-211ENST00000515289 SERP2Q8N6R1 65 aa3.42□□□□□ -1.86
NPHP3-211ENST00000515289 SRRM2Q9UQ35 2752 aaKnown RBP3.41□□□□□ -1.86
NPHP3-211ENST00000515289 KMT2CQ8NEZ4 4911 aaKnown RBP3.41□□□□□ -1.86
NPHP3-211ENST00000515289 K7EQZ3 153 aa3.41□□□□□ -1.86
NPHP3-211ENST00000515289 KRTAP10-6P60371 365 aaPredicted RBP3.41□□□□□ -1.86
NPHP3-211ENST00000515289 Q96NJ1 140 aa3.41□□□□□ -1.86
NPHP3-211ENST00000515289 hDV103S1A0JD37 113 aa3.4□□□□□ -1.87
NPHP3-211ENST00000515289 KRTAP12-2P59991 146 aa3.4□□□□□ -1.87
NPHP3-211ENST00000515289 PKHD1P08F94 4074 aa3.39□□□□□ -1.87
NPHP3-211ENST00000515289 KRTAP10-4P60372 401 aaPredicted RBP3.39□□□□□ -1.87
NPHP3-211ENST00000515289 SSBP3-AS1Q7Z2R9 100 aa3.38□□□□□ -1.87
NPHP3-211ENST00000515289 TMEM254Q8TBM7 123 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms