RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.25□□□□□ -2.05
CAST-242ENST00000515063 SMIM26A0A096LP01 95 aa2.25□□□□□ -2.05
CAST-242ENST00000515063 NBDYA0A0U1RRE5 68 aa2.25□□□□□ -2.05
CAST-242ENST00000515063 H3BPC8 53 aa2.25□□□□□ -2.05
CAST-242ENST00000515063 Q6ZRN7 208 aaPredicted RBP2.25□□□□□ -2.05
CAST-242ENST00000515063 BIRC6Q9NR09 4857 aa2.25□□□□□ -2.05
CAST-242ENST00000515063 IGKV2-24A0A0C4DH68 120 aa2.24□□□□□ -2.05
CAST-242ENST00000515063 HCG22E2RYF7 251 aa2.24□□□□□ -2.05
CAST-242ENST00000515063 NDUFB1O75438 58 aa2.24□□□□□ -2.05
CAST-242ENST00000515063 OXTP01178 125 aa2.24□□□□□ -2.05
CAST-242ENST00000515063 UBE2AP49459 152 aa2.24□□□□□ -2.05
CAST-242ENST00000515063 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
CAST-242ENST00000515063 KRTAP13-1Q8IUC0 172 aa2.24□□□□□ -2.05
CAST-242ENST00000515063 ZCCHC13Q8WW36 166 aaKnown RBP2.24□□□□□ -2.05
CAST-242ENST00000515063 HIGD2AQ9BW72 106 aa2.24□□□□□ -2.05
CAST-242ENST00000515063 SNURFQ9Y675 71 aa2.24□□□□□ -2.05
CAST-242ENST00000515063 A0A087WSZ3 146 aa2.23□□□□□ -2.05
CAST-242ENST00000515063 K7EQZ3 153 aa2.23□□□□□ -2.05
CAST-242ENST00000515063 LINC00483Q53H64 154 aa2.23□□□□□ -2.05
CAST-242ENST00000515063 Q5XG85 94 aa2.23□□□□□ -2.05
CAST-242ENST00000515063 PHF5AQ7RTV0 110 aaKnown RBP2.23□□□□□ -2.05
CAST-242ENST00000515063 Q8N9L7 120 aa2.23□□□□□ -2.05
CAST-242ENST00000515063 CYP4F30PQ9H0H9 118 aa2.23□□□□□ -2.05
CAST-242ENST00000515063 LINC00472Q9H8W2 130 aa2.23□□□□□ -2.05
CAST-242ENST00000515063 ZNF706Q9Y5V0 76 aaPredicted RBP2.23□□□□□ -2.05
CAST-242ENST00000515063 hDV103S1A0JD37 113 aa2.22□□□□□ -2.05
CAST-242ENST00000515063 A8MWP4 228 aa2.22□□□□□ -2.05
CAST-242ENST00000515063 ZNF861PO60384 105 aa2.22□□□□□ -2.05
CAST-242ENST00000515063 PRLHP81277 87 aa2.22□□□□□ -2.05
CAST-242ENST00000515063 PRR15Q8IV56 129 aa2.22□□□□□ -2.05
CAST-242ENST00000515063 SPACA4Q8TDM5 124 aa2.22□□□□□ -2.05
CAST-242ENST00000515063 VPS13DQ5THJ4 4388 aa2.21□□□□□ -2.05
CAST-242ENST00000515063 A0A087WTM6 91 aa2.21□□□□□ -2.06
CAST-242ENST00000515063 CHTF8P0CG12 524 aa2.21□□□□□ -2.06
CAST-242ENST00000515063 MP68P56378 58 aa2.21□□□□□ -2.06
CAST-242ENST00000515063 SPANXA2-OT1Q8N9U9 137 aa2.21□□□□□ -2.06
CAST-242ENST00000515063 PLAC8Q9NZF1 115 aa2.21□□□□□ -2.06
CAST-242ENST00000515063 RYR3Q15413 4870 aa2.2□□□□□ -2.06
CAST-242ENST00000515063 MOBPQ13875 183 aa2.2□□□□□ -2.06
CAST-242ENST00000515063 ASB16-AS1Q495Z4 193 aa2.2□□□□□ -2.06
CAST-242ENST00000515063 CAMK2N1Q7Z7J9 78 aa2.2□□□□□ -2.06
CAST-242ENST00000515063 TP53AIP1Q9HCN2 124 aa2.2□□□□□ -2.06
CAST-242ENST00000515063 PLECQ15149 4684 aaKnown RBP2.2□□□□□ -2.06
CAST-242ENST00000515063 DNAH10Q8IVF4 4471 aa2.2□□□□□ -2.06
CAST-242ENST00000515063 TRAV22A0A0B4J277 110 aa2.19□□□□□ -2.06
CAST-242ENST00000515063 CD164Q04900 197 aa2.19□□□□□ -2.06
CAST-242ENST00000515063 C4orf26Q17RF5 130 aa2.19□□□□□ -2.06
CAST-242ENST00000515063 CASC2Q6XLA1 102 aa2.19□□□□□ -2.06
CAST-242ENST00000515063 FP248Q71RG6 208 aaPredicted RBP2.19□□□□□ -2.06
CAST-242ENST00000515063 DNAH17Q9UFH2 4485 aa2.19□□□□□ -2.06
CAST-242ENST00000515063 TGP01266 2768 aa2.19□□□□□ -2.06
CAST-242ENST00000515063 STAB2Q8WWQ8 2551 aa2.18□□□□□ -2.06
CAST-242ENST00000515063 DNAH7Q8WXX0 4024 aa2.18□□□□□ -2.06
CAST-242ENST00000515063 MGAM2Q2M2H8 2515 aa2.18□□□□□ -2.06
CAST-242ENST00000515063 MMP24-AS1A0A0U1RRL7 71 aa2.18□□□□□ -2.06
CAST-242ENST00000515063 PANO1I0J062 215 aa2.18□□□□□ -2.06
CAST-242ENST00000515063 Q1T7F1 81 aa2.18□□□□□ -2.06
CAST-242ENST00000515063 HRCT1Q6UXD1 115 aa2.18□□□□□ -2.06
CAST-242ENST00000515063 SSBP3-AS1Q7Z2R9 100 aa2.18□□□□□ -2.06
CAST-242ENST00000515063 WFDC13Q8IUB5 93 aa2.18□□□□□ -2.06
CAST-242ENST00000515063 Q96NJ1 140 aa2.18□□□□□ -2.06
CAST-242ENST00000515063 DNAH6Q9C0G6 4158 aa2.18□□□□□ -2.06
CAST-242ENST00000515063 A0A0G2JQZ4 141 aa2.17□□□□□ -2.06
CAST-242ENST00000515063 H0Y9P7 68 aa2.17□□□□□ -2.06
CAST-242ENST00000515063 KRTAP10-1P60331 282 aa2.17□□□□□ -2.06
CAST-242ENST00000515063 C1orf134Q5TEV5 83 aa2.17□□□□□ -2.06
CAST-242ENST00000515063 C1orf195Q5TG92 126 aa2.17□□□□□ -2.06
CAST-242ENST00000515063 C1orf64Q8NEQ6 169 aa2.17□□□□□ -2.06
CAST-242ENST00000515063 LINC00208Q96KT6 92 aa2.17□□□□□ -2.06
CAST-242ENST00000515063 C8orf17Q9NRJ1 99 aa2.17□□□□□ -2.06
CAST-242ENST00000515063 PRO0628Q9UI54 55 aa2.17□□□□□ -2.06
CAST-242ENST00000515063 PSORS1C2Q9UIG4 136 aa2.17□□□□□ -2.06
CAST-242ENST00000515063 LYSTQ99698 3801 aa2.17□□□□□ -2.06
CAST-242ENST00000515063 COL7A1Q02388 2944 aa2.17□□□□□ -2.06
CAST-242ENST00000515063 DNAH2Q9P225 4427 aa2.16□□□□□ -2.06
CAST-242ENST00000515063 A0A1B0GVX0 72 aa2.16□□□□□ -2.06
CAST-242ENST00000515063 C8orf87E5RJ46 101 aa2.16□□□□□ -2.06
CAST-242ENST00000515063 DEFB116Q30KQ4 102 aa2.16□□□□□ -2.06
CAST-242ENST00000515063 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
CAST-242ENST00000515063 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
CAST-242ENST00000515063 CSMD3Q7Z407 3707 aa2.16□□□□□ -2.06
CAST-242ENST00000515063 KMT2CQ8NEZ4 4911 aaKnown RBP2.16□□□□□ -2.06
CAST-242ENST00000515063 PRKDCP78527 4128 aaKnown RBP2.16□□□□□ -2.06
CAST-242ENST00000515063 DNAH8Q96JB1 4490 aa2.15□□□□□ -2.06
CAST-242ENST00000515063 EPPK1P58107 5090 aaKnown RBP2.15□□□□□ -2.06
CAST-242ENST00000515063 MEGF8Q7Z7M0 2845 aa2.15□□□□□ -2.06
CAST-242ENST00000515063 HECTD4Q9Y4D8 3996 aa2.15□□□□□ -2.06
CAST-242ENST00000515063 PCLOQ9Y6V0 5065 aa2.15□□□□□ -2.07
CAST-242ENST00000515063 NDUFS5O43920 106 aa2.15□□□□□ -2.07
CAST-242ENST00000515063 IGLV7-43P04211 117 aa2.15□□□□□ -2.07
CAST-242ENST00000515063 FAM229BQ4G0N7 80 aa2.15□□□□□ -2.07
CAST-242ENST00000515063 MRPL34Q9BQ48 92 aaKnown RBP2.15□□□□□ -2.07
CAST-242ENST00000515063 PSPHP1O15172 72 aa2.14□□□□□ -2.07
CAST-242ENST00000515063 LIMD2Q9BT23 127 aa2.14□□□□□ -2.07
CAST-242ENST00000515063 STARD9Q9P2P6 4700 aa2.13□□□□□ -2.07
CAST-242ENST00000515063 LOC101927531A0A1B0GV80 90 aa2.13□□□□□ -2.07
CAST-242ENST00000515063 Q6ZSA8 131 aa2.13□□□□□ -2.07
CAST-242ENST00000515063 HYDINQ4G0P3 5121 aa2.12□□□□□ -2.07
CAST-242ENST00000515063 KRTAP5-2Q701N4 177 aa2.12□□□□□ -2.07
CAST-242ENST00000515063 ALMS1Q8TCU4 4167 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms