RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 VPS13DQ5THJ4 4388 aa4.6□□□□□ -1.67
PDLIM5-219ENST00000514743 ZNF861PO60384 105 aa4.6□□□□□ -1.67
PDLIM5-219ENST00000514743 HRES1P13985 223 aa4.6□□□□□ -1.67
PDLIM5-219ENST00000514743 SPRR1AP35321 89 aa4.6□□□□□ -1.67
PDLIM5-219ENST00000514743 STAB2Q8WWQ8 2551 aa4.59□□□□□ -1.68
PDLIM5-219ENST00000514743 WWC2-AS2Q96NR7 200 aa4.59□□□□□ -1.68
PDLIM5-219ENST00000514743 A0A0G2JQZ4 141 aa4.58□□□□□ -1.68
PDLIM5-219ENST00000514743 A0A1W2PNN7 141 aa4.58□□□□□ -1.68
PDLIM5-219ENST00000514743 Q6ZRX8 168 aa4.58□□□□□ -1.68
PDLIM5-219ENST00000514743 Q8N377 158 aa4.58□□□□□ -1.68
PDLIM5-219ENST00000514743 SPRR4Q96PI1 79 aa4.58□□□□□ -1.68
PDLIM5-219ENST00000514743 DNAH6Q9C0G6 4158 aa4.58□□□□□ -1.68
PDLIM5-219ENST00000514743 DNAH2Q9P225 4427 aa4.58□□□□□ -1.68
PDLIM5-219ENST00000514743 A8MUU9 505 aa4.57□□□□□ -1.68
PDLIM5-219ENST00000514743 HECTD4Q9Y4D8 3996 aa4.57□□□□□ -1.68
PDLIM5-219ENST00000514743 A0A1B0GU69 56 aa4.57□□□□□ -1.68
PDLIM5-219ENST00000514743 K7ERS5 55 aa4.57□□□□□ -1.68
PDLIM5-219ENST00000514743 MGAM2Q2M2H8 2515 aa4.57□□□□□ -1.68
PDLIM5-219ENST00000514743 TENM2Q9NT68 2774 aa4.57□□□□□ -1.68
PDLIM5-219ENST00000514743 UQCR11O14957 56 aa4.56□□□□□ -1.68
PDLIM5-219ENST00000514743 IGLV5-48A0A075B6I7 105 aa4.56□□□□□ -1.68
PDLIM5-219ENST00000514743 APLNQ9ULZ1 77 aa4.56□□□□□ -1.68
PDLIM5-219ENST00000514743 SRRM2Q9UQ35 2752 aaKnown RBP4.55□□□□□ -1.68
PDLIM5-219ENST00000514743 DHRS4-AS1Q9P1J3 65 aa4.55□□□□□ -1.68
PDLIM5-219ENST00000514743 IGLV5-52A0A0A0MRZ9 124 aa4.54□□□□□ -1.68
PDLIM5-219ENST00000514743 IGKV2-24A0A0C4DH68 120 aa4.54□□□□□ -1.68
PDLIM5-219ENST00000514743 A0A096LNI7 61 aa4.54□□□□□ -1.68
PDLIM5-219ENST00000514743 SPINT4Q6UDR6 99 aa4.54□□□□□ -1.68
PDLIM5-219ENST00000514743 Q8NBF4 154 aa4.54□□□□□ -1.68
PDLIM5-219ENST00000514743 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.53□□□□□ -1.68
PDLIM5-219ENST00000514743 KMT2AQ03164 3969 aa4.53□□□□□ -1.68
PDLIM5-219ENST00000514743 DNAH17Q9UFH2 4485 aa4.53□□□□□ -1.68
PDLIM5-219ENST00000514743 DNAH8Q96JB1 4490 aa4.53□□□□□ -1.68
PDLIM5-219ENST00000514743 C1orf137Q5JT78 98 aa4.53□□□□□ -1.68
PDLIM5-219ENST00000514743 DNHD1Q96M86 4753 aa4.52□□□□□ -1.69
PDLIM5-219ENST00000514743 PRLHP81277 87 aa4.51□□□□□ -1.69
PDLIM5-219ENST00000514743 KRTAP29-1A8MX34 341 aaPredicted RBP4.51□□□□□ -1.69
PDLIM5-219ENST00000514743 KRTAP11-1Q8IUC1 163 aa4.51□□□□□ -1.69
PDLIM5-219ENST00000514743 FBN3Q75N90 2809 aa4.51□□□□□ -1.69
PDLIM5-219ENST00000514743 FRAS1Q86XX4 4008 aa4.5□□□□□ -1.69
PDLIM5-219ENST00000514743 UBE2DNLQ8IWF7 75 aa4.49□□□□□ -1.69
PDLIM5-219ENST00000514743 Q6ZRN7 208 aaPredicted RBP4.49□□□□□ -1.69
PDLIM5-219ENST00000514743 RPL37AP61513 92 aaKnown RBP4.48□□□□□ -1.69
PDLIM5-219ENST00000514743 DMAC1Q96GE9 116 aa4.48□□□□□ -1.69
PDLIM5-219ENST00000514743 NUPR2A6NF83 97 aa4.48□□□□□ -1.69
PDLIM5-219ENST00000514743 MEGF8Q7Z7M0 2845 aa4.48□□□□□ -1.69
PDLIM5-219ENST00000514743 LINC00472Q9H8W2 130 aa4.48□□□□□ -1.69
PDLIM5-219ENST00000514743 NBDYA0A0U1RRE5 68 aa4.47□□□□□ -1.69
PDLIM5-219ENST00000514743 PANO1I0J062 215 aa4.46□□□□□ -1.7
PDLIM5-219ENST00000514743 A0A087WSZ3 146 aa4.46□□□□□ -1.7
PDLIM5-219ENST00000514743 C14orf177Q52M58 125 aa4.45□□□□□ -1.7
PDLIM5-219ENST00000514743 KRTAP23-1A1A580 65 aa4.45□□□□□ -1.7
PDLIM5-219ENST00000514743 IGFL1Q6UW32 110 aa4.45□□□□□ -1.7
PDLIM5-219ENST00000514743 CRIPTQ9P021 101 aa4.45□□□□□ -1.7
PDLIM5-219ENST00000514743 DNAH5Q8TE73 4624 aa4.45□□□□□ -1.7
PDLIM5-219ENST00000514743 IGLV8-61A0A075B6I0 122 aa4.45□□□□□ -1.7
PDLIM5-219ENST00000514743 KRTAP21-3Q3LHN1 58 aa4.45□□□□□ -1.7
PDLIM5-219ENST00000514743 DNAH11Q96DT5 4516 aa4.44□□□□□ -1.7
PDLIM5-219ENST00000514743 ALMS1Q8TCU4 4167 aa4.43□□□□□ -1.7
PDLIM5-219ENST00000514743 SSBP3-AS1Q7Z2R9 100 aa4.43□□□□□ -1.7
PDLIM5-219ENST00000514743 CIRBP-AS1Q8TBR5 109 aa4.43□□□□□ -1.7
PDLIM5-219ENST00000514743 SPRR1BP22528 89 aa4.42□□□□□ -1.7
PDLIM5-219ENST00000514743 KRTAP13-1Q8IUC0 172 aa4.42□□□□□ -1.7
PDLIM5-219ENST00000514743 ACYP2P14621 99 aa4.42□□□□□ -1.7
PDLIM5-219ENST00000514743 Q5W150 140 aa4.42□□□□□ -1.7
PDLIM5-219ENST00000514743 A0A087WTM6 91 aa4.41□□□□□ -1.7
PDLIM5-219ENST00000514743 HYDINQ4G0P3 5121 aa4.41□□□□□ -1.7
PDLIM5-219ENST00000514743 SPACA4Q8TDM5 124 aa4.4□□□□□ -1.7
PDLIM5-219ENST00000514743 PKD1P98161 4303 aa4.4□□□□□ -1.7
PDLIM5-219ENST00000514743 LINC00304Q8N9R0 145 aa4.39□□□□□ -1.71
PDLIM5-219ENST00000514743 TP53AIP1Q9HCN2 124 aa4.38□□□□□ -1.71
PDLIM5-219ENST00000514743 FAT2Q9NYQ8 4349 aa4.38□□□□□ -1.71
PDLIM5-219ENST00000514743 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
PDLIM5-219ENST00000514743 IGLV7-43P04211 117 aa4.36□□□□□ -1.71
PDLIM5-219ENST00000514743 TGP01266 2768 aa4.36□□□□□ -1.71
PDLIM5-219ENST00000514743 MMP24-AS1A0A0U1RRL7 71 aa4.35□□□□□ -1.71
PDLIM5-219ENST00000514743 ANAPC11Q9NYG5 84 aa4.34□□□□□ -1.72
PDLIM5-219ENST00000514743 Q96NJ1 140 aa4.33□□□□□ -1.72
PDLIM5-219ENST00000514743 LRP1BQ9NZR2 4599 aa4.32□□□□□ -1.72
PDLIM5-219ENST00000514743 PSORS1C2Q9UIG4 136 aa4.32□□□□□ -1.72
PDLIM5-219ENST00000514743 FLG2Q5D862 2391 aaPredicted RBP4.32□□□□□ -1.72
PDLIM5-219ENST00000514743 A0A1B0GVX0 72 aa4.3□□□□□ -1.72
PDLIM5-219ENST00000514743 SACSQ9NZJ4 4579 aa4.27□□□□□ -1.73
PDLIM5-219ENST00000514743 VPS13BQ7Z7G8 4022 aa4.26□□□□□ -1.73
PDLIM5-219ENST00000514743 PKHD1L1Q86WI1 4243 aa4.26□□□□□ -1.73
PDLIM5-219ENST00000514743 LY6G6CO95867 125 aa4.25□□□□□ -1.73
PDLIM5-219ENST00000514743 KRTAP10-2P60368 255 aa4.25□□□□□ -1.73
PDLIM5-219ENST00000514743 SPINK6Q6UWN8 80 aa4.25□□□□□ -1.73
PDLIM5-219ENST00000514743 PKHD1P08F94 4074 aa4.24□□□□□ -1.73
PDLIM5-219ENST00000514743 H0YAA0 97 aa4.22□□□□□ -1.73
PDLIM5-219ENST00000514743 Q6ZSA8 131 aa4.21□□□□□ -1.74
PDLIM5-219ENST00000514743 MRPL34Q9BQ48 92 aaKnown RBP4.2□□□□□ -1.74
PDLIM5-219ENST00000514743 KRTAP10-1P60331 282 aa4.19□□□□□ -1.74
PDLIM5-219ENST00000514743 TPRXLQ17RH7 258 aa4.19□□□□□ -1.74
PDLIM5-219ENST00000514743 CAMK2N1Q7Z7J9 78 aa4.19□□□□□ -1.74
PDLIM5-219ENST00000514743 DYNC1H1Q14204 4646 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-219ENST00000514743 KRTAP13-2Q52LG2 175 aa4.17□□□□□ -1.74
PDLIM5-219ENST00000514743 APOBP04114 4563 aaKnown RBP4.15□□□□□ -1.74
PDLIM5-219ENST00000514743 KRTAP3-1Q9BYR8 98 aa4.15□□□□□ -1.75
PDLIM5-219ENST00000514743 KRTAP1-4P0C5Y4 121 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms