RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 LINC00313P59037 77 aa8.4□□□□□ -1.07
TSPAN17-208ENST00000514705 RBM12B-AS1Q9P1G2 102 aa8.38□□□□□ -1.07
TSPAN17-208ENST00000514705 LINC01558Q9Y6Z2 57 aa8.38□□□□□ -1.07
TSPAN17-208ENST00000514705 SPACA4Q8TDM5 124 aa8.38□□□□□ -1.07
TSPAN17-208ENST00000514705 C7orf65Q6ZTY9 151 aa8.36□□□□□ -1.07
TSPAN17-208ENST00000514705 A0A087X002 238 aa8.36□□□□□ -1.07
TSPAN17-208ENST00000514705 NOTCH2NLQ7Z3S9 236 aa8.36□□□□□ -1.07
TSPAN17-208ENST00000514705 TENM2Q9NT68 2774 aa8.36□□□□□ -1.07
TSPAN17-208ENST00000514705 FAM229AH3BQW9 127 aa8.32□□□□□ -1.08
TSPAN17-208ENST00000514705 C8orf87E5RJ46 101 aa8.3□□□□□ -1.08
TSPAN17-208ENST00000514705 Q6ZR54 194 aa8.29□□□□□ -1.08
TSPAN17-208ENST00000514705 IGLV7-43P04211 117 aa8.28□□□□□ -1.08
TSPAN17-208ENST00000514705 PRAC1Q96KF2 57 aa8.27□□□□□ -1.09
TSPAN17-208ENST00000514705 Q5W150 140 aa8.26□□□□□ -1.09
TSPAN17-208ENST00000514705 Q96NJ1 140 aa8.26□□□□□ -1.09
TSPAN17-208ENST00000514705 SSBP3-AS1Q7Z2R9 100 aa8.24□□□□□ -1.09
TSPAN17-208ENST00000514705 UQCR11O14957 56 aa8.24□□□□□ -1.09
TSPAN17-208ENST00000514705 MIR22HGQ0VDD5 57 aa8.24□□□□□ -1.09
TSPAN17-208ENST00000514705 KRTAP13-1Q8IUC0 172 aa8.21□□□□□ -1.09
TSPAN17-208ENST00000514705 LINC00483Q53H64 154 aa8.2□□□□□ -1.1
TSPAN17-208ENST00000514705 A6NN06 94 aa8.19□□□□□ -1.1
TSPAN17-208ENST00000514705 CSMD3Q7Z407 3707 aa8.17□□□□□ -1.1
TSPAN17-208ENST00000514705 PLAC8Q9NZF1 115 aa8.17□□□□□ -1.1
TSPAN17-208ENST00000514705 Q8N1X5 172 aa8.16□□□□□ -1.1
TSPAN17-208ENST00000514705 SMR3BP02814 79 aaPredicted RBP8.15□□□□□ -1.1
TSPAN17-208ENST00000514705 DMBT1Q9UGM3 2413 aaPredicted RBP8.15□□□□□ -1.1
TSPAN17-208ENST00000514705 COL7A1Q02388 2944 aa8.15□□□□□ -1.1
TSPAN17-208ENST00000514705 Q6ZRN7 208 aaPredicted RBP8.14□□□□□ -1.11
TSPAN17-208ENST00000514705 TYMSOSQ8TAI1 123 aa8.14□□□□□ -1.11
TSPAN17-208ENST00000514705 PLA2G1BP04054 148 aaKnown RBP8.13□□□□□ -1.11
TSPAN17-208ENST00000514705 SPINT4Q6UDR6 99 aa8.12□□□□□ -1.11
TSPAN17-208ENST00000514705 TGP01266 2768 aa8.11□□□□□ -1.11
TSPAN17-208ENST00000514705 H3BS24 57 aa8.09□□□□□ -1.11
TSPAN17-208ENST00000514705 DMAC1Q96GE9 116 aa8.09□□□□□ -1.11
TSPAN17-208ENST00000514705 KRTAP10-2P60368 255 aa8.07□□□□□ -1.12
TSPAN17-208ENST00000514705 ADM2Q7Z4H4 148 aa8.07□□□□□ -1.12
TSPAN17-208ENST00000514705 ASB16-AS1Q495Z4 193 aa8.06□□□□□ -1.12
TSPAN17-208ENST00000514705 FLG2Q5D862 2391 aaPredicted RBP8.05□□□□□ -1.12
TSPAN17-208ENST00000514705 C9orf92A6NGG3 77 aa8.02□□□□□ -1.12
TSPAN17-208ENST00000514705 KRTAP10-1P60331 282 aa8.01□□□□□ -1.13
TSPAN17-208ENST00000514705 LINC01554Q52M75 96 aa8□□□□□ -1.13
TSPAN17-208ENST00000514705 CSAG1Q6PB30 78 aa7.97□□□□□ -1.13
TSPAN17-208ENST00000514705 LINC00304Q8N9R0 145 aa7.95□□□□□ -1.14
TSPAN17-208ENST00000514705 FBN3Q75N90 2809 aa7.94□□□□□ -1.14
TSPAN17-208ENST00000514705 SPATA8Q6RVD6 105 aa7.94□□□□□ -1.14
TSPAN17-208ENST00000514705 KRTAP13-2Q52LG2 175 aa7.91□□□□□ -1.14
TSPAN17-208ENST00000514705 A0A1B0GU33 70 aa7.85□□□□□ -1.15
TSPAN17-208ENST00000514705 J3QL48 77 aa7.83□□□□□ -1.16
TSPAN17-208ENST00000514705 KRTAP13-3Q3SY46 172 aa7.83□□□□□ -1.16
TSPAN17-208ENST00000514705 CRIPTQ9P021 101 aa7.83□□□□□ -1.16
TSPAN17-208ENST00000514705 DNAH10Q8IVF4 4471 aa7.82□□□□□ -1.16
TSPAN17-208ENST00000514705 HUWE1Q7Z6Z7 4374 aaKnown RBP7.79□□□□□ -1.16
TSPAN17-208ENST00000514705 MEGF8Q7Z7M0 2845 aa7.79□□□□□ -1.16
TSPAN17-208ENST00000514705 A0A0D9SG42 100 aa7.77□□□□□ -1.17
TSPAN17-208ENST00000514705 Q5VSD8 79 aa7.76□□□□□ -1.17
TSPAN17-208ENST00000514705 ANK2Q01484 3957 aa7.72□□□□□ -1.17
TSPAN17-208ENST00000514705 KRTAP16-1A8MUX0 517 aa7.7□□□□□ -1.18
TSPAN17-208ENST00000514705 KRTAP1-4P0C5Y4 121 aa7.66□□□□□ -1.18
TSPAN17-208ENST00000514705 H1FX-AS1Q4G0G2 97 aa7.65□□□□□ -1.18
TSPAN17-208ENST00000514705 Q6ZSA8 131 aa7.65□□□□□ -1.18
TSPAN17-208ENST00000514705 H0YAA0 97 aa7.57□□□□□ -1.2
TSPAN17-208ENST00000514705 KRTAP25-1Q3LHN0 102 aa7.56□□□□□ -1.2
TSPAN17-208ENST00000514705 LYSTQ99698 3801 aa7.55□□□□□ -1.2
TSPAN17-208ENST00000514705 DNAH9Q9NYC9 4486 aa7.53□□□□□ -1.2
TSPAN17-208ENST00000514705 PLECQ15149 4684 aaKnown RBP7.53□□□□□ -1.2
TSPAN17-208ENST00000514705 COX6B2Q6YFQ2 88 aa7.52□□□□□ -1.21
TSPAN17-208ENST00000514705 A8MUU9 505 aa7.49□□□□□ -1.21
TSPAN17-208ENST00000514705 A0A1B0GVY2 172 aa7.49□□□□□ -1.21
TSPAN17-208ENST00000514705 RPL37P61927 97 aaKnown RBP7.48□□□□□ -1.21
TSPAN17-208ENST00000514705 ROMO1P60602 79 aa7.47□□□□□ -1.21
TSPAN17-208ENST00000514705 DNHD1Q96M86 4753 aa7.45□□□□□ -1.22
TSPAN17-208ENST00000514705 DNAH1Q9P2D7 4330 aa7.44□□□□□ -1.22
TSPAN17-208ENST00000514705 LUZP6Q538Z0 58 aa7.43□□□□□ -1.22
TSPAN17-208ENST00000514705 C20orf166-AS1Q96NR2 134 aa7.43□□□□□ -1.22
TSPAN17-208ENST00000514705 RPS29P62273 56 aaKnown RBP7.42□□□□□ -1.22
TSPAN17-208ENST00000514705 S4R3F8 94 aa7.41□□□□□ -1.22
TSPAN17-208ENST00000514705 DNAH8Q96JB1 4490 aa7.38□□□□□ -1.23
TSPAN17-208ENST00000514705 CMYA5Q8N3K9 4069 aa7.35□□□□□ -1.23
TSPAN17-208ENST00000514705 FRAS1Q86XX4 4008 aa7.34□□□□□ -1.23
TSPAN17-208ENST00000514705 KRTAP3-1Q9BYR8 98 aa7.34□□□□□ -1.23
TSPAN17-208ENST00000514705 DNAH11Q96DT5 4516 aa7.32□□□□□ -1.24
TSPAN17-208ENST00000514705 STARD9Q9P2P6 4700 aa7.31□□□□□ -1.24
TSPAN17-208ENST00000514705 DNAH7Q8WXX0 4024 aa7.31□□□□□ -1.24
TSPAN17-208ENST00000514705 DNAH3Q8TD57 4116 aa7.29□□□□□ -1.24
TSPAN17-208ENST00000514705 PRKDCP78527 4128 aaKnown RBP7.28□□□□□ -1.24
TSPAN17-208ENST00000514705 C10orf95Q9H7T3 257 aa7.27□□□□□ -1.25
TSPAN17-208ENST00000514705 KMT2AQ03164 3969 aa7.26□□□□□ -1.25
TSPAN17-208ENST00000514705 NDUFAF8A1L188 74 aa7.26□□□□□ -1.25
TSPAN17-208ENST00000514705 VPS13DQ5THJ4 4388 aa7.25□□□□□ -1.25
TSPAN17-208ENST00000514705 DNAH17Q9UFH2 4485 aa7.23□□□□□ -1.25
TSPAN17-208ENST00000514705 A0A0A0MQY5 61 aa7.23□□□□□ -1.25
TSPAN17-208ENST00000514705 SEC61BP60468 96 aaKnown RBP7.19□□□□□ -1.26
TSPAN17-208ENST00000514705 LRP1BQ9NZR2 4599 aa7.17□□□□□ -1.26
TSPAN17-208ENST00000514705 P0C880 135 aa7.16□□□□□ -1.26
TSPAN17-208ENST00000514705 CAMK2N1Q7Z7J9 78 aa7.16□□□□□ -1.26
TSPAN17-208ENST00000514705 ALMS1Q8TCU4 4167 aa7.16□□□□□ -1.26
TSPAN17-208ENST00000514705 DNAH2Q9P225 4427 aa7.15□□□□□ -1.27
TSPAN17-208ENST00000514705 HECTD4Q9Y4D8 3996 aa7.11□□□□□ -1.27
TSPAN17-208ENST00000514705 KRTAP10-8P60410 259 aa7.11□□□□□ -1.27
TSPAN17-208ENST00000514705 M0QZ58 72 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms