RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 SCGB1C2P0DMR2 95 aa4.72□□□□□ -1.65
NEDD9-213ENST00000512665 Q6JHZ5 121 aa4.72□□□□□ -1.65
NEDD9-213ENST00000512665 TMEM256-PLSCR3K7ERE1 68 aa4.71□□□□□ -1.66
NEDD9-213ENST00000512665 DNAL4O96015 105 aa4.71□□□□□ -1.66
NEDD9-213ENST00000512665 BATFQ16520 125 aa4.71□□□□□ -1.66
NEDD9-213ENST00000512665 LYRM7Q5U5X0 104 aa4.71□□□□□ -1.66
NEDD9-213ENST00000512665 Q8N9P0 234 aaPredicted RBP4.71□□□□□ -1.66
NEDD9-213ENST00000512665 OBSCN-AS1Q96MR7 158 aa4.71□□□□□ -1.66
NEDD9-213ENST00000512665 KRTAP4-12Q9BQ66 201 aa4.71□□□□□ -1.66
NEDD9-213ENST00000512665 ORMDL1Q9P0S3 153 aa4.71□□□□□ -1.66
NEDD9-213ENST00000512665 A0A0G2JQZ4 141 aa4.7□□□□□ -1.66
NEDD9-213ENST00000512665 A8MWP4 228 aa4.7□□□□□ -1.66
NEDD9-213ENST00000512665 TCL1BO95988 128 aa4.7□□□□□ -1.66
NEDD9-213ENST00000512665 NDUFV3P56181 108 aaKnown RBP4.7□□□□□ -1.66
NEDD9-213ENST00000512665 UBE2V1Q13404 147 aa4.7□□□□□ -1.66
NEDD9-213ENST00000512665 COL5A1-AS1Q5SY13 56 aa4.7□□□□□ -1.66
NEDD9-213ENST00000512665 RBM12B-AS1Q9P1G2 102 aa4.7□□□□□ -1.66
NEDD9-213ENST00000512665 A0A1W2PPM0 123 aa4.69□□□□□ -1.66
NEDD9-213ENST00000512665 F8WEM9 126 aa4.69□□□□□ -1.66
NEDD9-213ENST00000512665 H3BUT2 72 aa4.69□□□□□ -1.66
NEDD9-213ENST00000512665 ATXN8Q156A1 80 aa4.69□□□□□ -1.66
NEDD9-213ENST00000512665 NAA38Q9BRA0 125 aaKnown RBP4.69□□□□□ -1.66
NEDD9-213ENST00000512665 IGFL1Q6UW32 110 aa4.68□□□□□ -1.66
NEDD9-213ENST00000512665 H3BMG7 143 aa4.67□□□□□ -1.66
NEDD9-213ENST00000512665 BAALC-AS2P0C853 105 aa4.67□□□□□ -1.66
NEDD9-213ENST00000512665 FABP2P12104 132 aa4.67□□□□□ -1.66
NEDD9-213ENST00000512665 SPRR2EP22531 72 aa4.66□□□□□ -1.66
NEDD9-213ENST00000512665 SPRR2BP35325 72 aa4.66□□□□□ -1.66
NEDD9-213ENST00000512665 SPRR2AP35326 72 aa4.66□□□□□ -1.66
NEDD9-213ENST00000512665 PCP4L1A6NKN8 68 aa4.65□□□□□ -1.67
NEDD9-213ENST00000512665 TRBV7-7A0A0K0K1E9 115 aa4.64□□□□□ -1.67
NEDD9-213ENST00000512665 A8MUU9 505 aa4.64□□□□□ -1.67
NEDD9-213ENST00000512665 HRES1P13985 223 aa4.64□□□□□ -1.67
NEDD9-213ENST00000512665 TEN1Q86WV5 123 aa4.64□□□□□ -1.67
NEDD9-213ENST00000512665 ANKRD29Q8N6D5 301 aa4.64□□□□□ -1.67
NEDD9-213ENST00000512665 TRBV7-4A0A0J9YYF1 115 aa4.63□□□□□ -1.67
NEDD9-213ENST00000512665 C9JAW5 83 aa4.62□□□□□ -1.67
NEDD9-213ENST00000512665 JMJD7-PLA2G4BH0Y9G9 81 aa4.62□□□□□ -1.67
NEDD9-213ENST00000512665 H3BT86 120 aa4.62□□□□□ -1.67
NEDD9-213ENST00000512665 RBM3P98179 157 aaKnown RBP4.62□□□□□ -1.67
NEDD9-213ENST00000512665 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
NEDD9-213ENST00000512665 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
NEDD9-213ENST00000512665 A0A1W2PNM2 257 aa4.61□□□□□ -1.67
NEDD9-213ENST00000512665 Q96NJ1 140 aa4.61□□□□□ -1.67
NEDD9-213ENST00000512665 SPCS1Q9Y6A9 102 aa4.61□□□□□ -1.67
NEDD9-213ENST00000512665 A0A1B0GW54 56 aa4.6□□□□□ -1.67
NEDD9-213ENST00000512665 LOC110117498A0A087WWA1 95 aa4.59□□□□□ -1.67
NEDD9-213ENST00000512665 K7EP34 96 aa4.59□□□□□ -1.67
NEDD9-213ENST00000512665 PDE6GP18545 87 aa4.59□□□□□ -1.67
NEDD9-213ENST00000512665 KRTAP10-5P60370 271 aa4.59□□□□□ -1.67
NEDD9-213ENST00000512665 C21orf62-AS1Q17RA5 79 aa4.59□□□□□ -1.67
NEDD9-213ENST00000512665 DSCR8Q96T75 97 aa4.59□□□□□ -1.67
NEDD9-213ENST00000512665 SS18L2Q9UHA2 77 aa4.59□□□□□ -1.67
NEDD9-213ENST00000512665 PRO0461Q9UI25 63 aa4.59□□□□□ -1.67
NEDD9-213ENST00000512665 MTURNQ8N3F0 131 aa4.58□□□□□ -1.68
NEDD9-213ENST00000512665 KRTAP4-8A0A0G2JLE6 195 aa4.57□□□□□ -1.68
NEDD9-213ENST00000512665 CCKP06307 115 aa4.57□□□□□ -1.68
NEDD9-213ENST00000512665 Q6ZQT0 140 aa4.57□□□□□ -1.68
NEDD9-213ENST00000512665 SPRR2FQ96RM1 72 aa4.57□□□□□ -1.68
NEDD9-213ENST00000512665 A0A087WSZ3 146 aa4.56□□□□□ -1.68
NEDD9-213ENST00000512665 KRTAP16-1A8MUX0 517 aa4.56□□□□□ -1.68
NEDD9-213ENST00000512665 GTF2H5Q6ZYL4 71 aa4.56□□□□□ -1.68
NEDD9-213ENST00000512665 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
NEDD9-213ENST00000512665 NOTCH2NLQ7Z3S9 236 aa4.55□□□□□ -1.68
NEDD9-213ENST00000512665 F8W1H4 67 aa4.54□□□□□ -1.68
NEDD9-213ENST00000512665 LINC00472Q9H8W2 130 aa4.54□□□□□ -1.68
NEDD9-213ENST00000512665 A0A1B0GV72 72 aa4.53□□□□□ -1.68
NEDD9-213ENST00000512665 MT1BP07438 61 aa4.53□□□□□ -1.68
NEDD9-213ENST00000512665 C14orf132Q9NPU4 83 aa4.53□□□□□ -1.68
NEDD9-213ENST00000512665 SPRR2DP22532 72 aa4.52□□□□□ -1.69
NEDD9-213ENST00000512665 KRTAP19-4Q3LI73 84 aa4.5□□□□□ -1.69
NEDD9-213ENST00000512665 VPS25Q9BRG1 176 aa4.49□□□□□ -1.69
NEDD9-213ENST00000512665 J3KT08 172 aa4.48□□□□□ -1.69
NEDD9-213ENST00000512665 Q5VV11 94 aa4.48□□□□□ -1.69
NEDD9-213ENST00000512665 IGKV4-1P06312 121 aa4.46□□□□□ -1.7
NEDD9-213ENST00000512665 ETDBQ3ZM63 59 aa4.46□□□□□ -1.7
NEDD9-213ENST00000512665 KRTAP19-8Q3LI54 63 aa4.45□□□□□ -1.7
NEDD9-213ENST00000512665 A0A1B0GV90 55 aa4.44□□□□□ -1.7
NEDD9-213ENST00000512665 NREPQ16612 68 aa4.44□□□□□ -1.7
NEDD9-213ENST00000512665 DEFB116Q30KQ4 102 aa4.43□□□□□ -1.7
NEDD9-213ENST00000512665 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
NEDD9-213ENST00000512665 SIGMAR1Q99720 223 aa4.43□□□□□ -1.7
NEDD9-213ENST00000512665 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
NEDD9-213ENST00000512665 A0A1B0GVX0 72 aa4.42□□□□□ -1.7
NEDD9-213ENST00000512665 C8orf87E5RJ46 101 aa4.42□□□□□ -1.7
NEDD9-213ENST00000512665 LINC00313P59037 77 aa4.42□□□□□ -1.7
NEDD9-213ENST00000512665 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
NEDD9-213ENST00000512665 DSCR10P59022 87 aa4.41□□□□□ -1.7
NEDD9-213ENST00000512665 Q6ZVQ6 151 aa4.41□□□□□ -1.7
NEDD9-213ENST00000512665 IGKV3D-7A0A0C4DH55 119 aa4.4□□□□□ -1.71
NEDD9-213ENST00000512665 H3BS24 57 aa4.4□□□□□ -1.71
NEDD9-213ENST00000512665 NDUFB1O75438 58 aa4.4□□□□□ -1.71
NEDD9-213ENST00000512665 PRR15Q8IV56 129 aa4.4□□□□□ -1.71
NEDD9-213ENST00000512665 FAM240AA0A1B0GVK7 77 aa4.39□□□□□ -1.71
NEDD9-213ENST00000512665 ACYP1P07311 99 aa4.39□□□□□ -1.71
NEDD9-213ENST00000512665 IGHV6-1A0A0B4J1U7 121 aa4.38□□□□□ -1.71
NEDD9-213ENST00000512665 UBL5Q9BZL1 73 aa4.38□□□□□ -1.71
NEDD9-213ENST00000512665 BPY2O14599 106 aa4.37□□□□□ -1.71
NEDD9-213ENST00000512665 SPRR2GQ9BYE4 73 aa4.37□□□□□ -1.71
NEDD9-213ENST00000512665 C8orf17Q9NRJ1 99 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms