RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 PRO0255Q9UI72 69 aa3.07□□□□□ -1.92
TRAPPC11-208ENST00000511955 LCE6AA0A183 80 aa3.07□□□□□ -1.92
TRAPPC11-208ENST00000511955 PDE6GP18545 87 aa3.07□□□□□ -1.92
TRAPPC11-208ENST00000511955 Q5W150 140 aa3.07□□□□□ -1.92
TRAPPC11-208ENST00000511955 LINC00612Q8N6U2 182 aa3.07□□□□□ -1.92
TRAPPC11-208ENST00000511955 DNAH1Q9P2D7 4330 aa3.06□□□□□ -1.92
TRAPPC11-208ENST00000511955 SLPIP03973 132 aa3.06□□□□□ -1.92
TRAPPC11-208ENST00000511955 ZCCHC13Q8WW36 166 aaKnown RBP3.05□□□□□ -1.92
TRAPPC11-208ENST00000511955 Q9BRP9 147 aa3.05□□□□□ -1.92
TRAPPC11-208ENST00000511955 DYNC2H1Q8NCM8 4307 aaKnown RBP3.05□□□□□ -1.92
TRAPPC11-208ENST00000511955 FRAS1Q86XX4 4008 aa3.05□□□□□ -1.92
TRAPPC11-208ENST00000511955 CCL18P55774 89 aa3.05□□□□□ -1.92
TRAPPC11-208ENST00000511955 LINC00315P59091 139 aa3.05□□□□□ -1.92
TRAPPC11-208ENST00000511955 CNBPP62633 177 aaKnown RBP3.05□□□□□ -1.92
TRAPPC11-208ENST00000511955 SACSQ9NZJ4 4579 aa3.05□□□□□ -1.92
TRAPPC11-208ENST00000511955 NDUFB1O75438 58 aa3.04□□□□□ -1.92
TRAPPC11-208ENST00000511955 LINC01558Q9Y6Z2 57 aa3.04□□□□□ -1.92
TRAPPC11-208ENST00000511955 COX7B2Q8TF08 81 aa3.04□□□□□ -1.92
TRAPPC11-208ENST00000511955 RYR2Q92736 4967 aa3.04□□□□□ -1.92
TRAPPC11-208ENST00000511955 IGKV2-28A0A075B6P5 120 aa3.03□□□□□ -1.92
TRAPPC11-208ENST00000511955 TRBV6-4A0A1B0GX49 114 aa3.03□□□□□ -1.92
TRAPPC11-208ENST00000511955 IGKV2D-28P01615 120 aa3.03□□□□□ -1.92
TRAPPC11-208ENST00000511955 WFDC10BQ8IUB3 73 aa3.03□□□□□ -1.92
TRAPPC11-208ENST00000511955 ST20-AS1Q8NBB2 130 aa3.03□□□□□ -1.92
TRAPPC11-208ENST00000511955 VPS13DQ5THJ4 4388 aa3.03□□□□□ -1.92
TRAPPC11-208ENST00000511955 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC11-208ENST00000511955 IGKV4-1P06312 121 aa3.03□□□□□ -1.92
TRAPPC11-208ENST00000511955 KRTAP19-1Q8IUB9 90 aa3.03□□□□□ -1.92
TRAPPC11-208ENST00000511955 DNAH2Q9P225 4427 aa3.02□□□□□ -1.93
TRAPPC11-208ENST00000511955 ZNF861PO60384 105 aa3.02□□□□□ -1.93
TRAPPC11-208ENST00000511955 LINC00208Q96KT6 92 aa3.02□□□□□ -1.93
TRAPPC11-208ENST00000511955 H3BNG1 76 aa3.02□□□□□ -1.93
TRAPPC11-208ENST00000511955 KRTAP1-5Q9BYS1 174 aa3.02□□□□□ -1.93
TRAPPC11-208ENST00000511955 CDKN2A-AS1Q9UH64 79 aa3.02□□□□□ -1.93
TRAPPC11-208ENST00000511955 ALMS1Q8TCU4 4167 aa3.01□□□□□ -1.93
TRAPPC11-208ENST00000511955 IGKV3OR2-268A0A0C4DH90 116 aa3.01□□□□□ -1.93
TRAPPC11-208ENST00000511955 M0QY20 66 aa3.01□□□□□ -1.93
TRAPPC11-208ENST00000511955 SPINK7P58062 85 aa3.01□□□□□ -1.93
TRAPPC11-208ENST00000511955 DNAH10Q8IVF4 4471 aa3.01□□□□□ -1.93
TRAPPC11-208ENST00000511955 CLPSL2Q6UWE3 100 aa3.01□□□□□ -1.93
TRAPPC11-208ENST00000511955 NBDYA0A0U1RRE5 68 aa3□□□□□ -1.93
TRAPPC11-208ENST00000511955 SPINT4Q6UDR6 99 aa3□□□□□ -1.93
TRAPPC11-208ENST00000511955 EPPK1P58107 5090 aaKnown RBP3□□□□□ -1.93
TRAPPC11-208ENST00000511955 IGLV4-60A0A075B6I1 120 aa2.99□□□□□ -1.93
TRAPPC11-208ENST00000511955 LELP1Q5T871 98 aa2.99□□□□□ -1.93
TRAPPC11-208ENST00000511955 ETDCA0A1B0GVM5 59 aa2.98□□□□□ -1.93
TRAPPC11-208ENST00000511955 ANGP03950 147 aaKnown RBP2.98□□□□□ -1.93
TRAPPC11-208ENST00000511955 PLAC8Q9NZF1 115 aa2.98□□□□□ -1.93
TRAPPC11-208ENST00000511955 R4GN34 69 aa2.98□□□□□ -1.93
TRAPPC11-208ENST00000511955 H0Y9P7 68 aa2.97□□□□□ -1.93
TRAPPC11-208ENST00000511955 KRTAP15-1Q3LI76 137 aa2.97□□□□□ -1.93
TRAPPC11-208ENST00000511955 PKHD1P08F94 4074 aa2.97□□□□□ -1.93
TRAPPC11-208ENST00000511955 IGKV2D-24A0A075B6R9 120 aa2.96□□□□□ -1.94
TRAPPC11-208ENST00000511955 UQCR11O14957 56 aa2.96□□□□□ -1.94
TRAPPC11-208ENST00000511955 LINC01556Q5JQF7 62 aa2.96□□□□□ -1.94
TRAPPC11-208ENST00000511955 HECTD4Q9Y4D8 3996 aa2.96□□□□□ -1.94
TRAPPC11-208ENST00000511955 FAT2Q9NYQ8 4349 aa2.96□□□□□ -1.94
TRAPPC11-208ENST00000511955 COX7BP24311 80 aa2.96□□□□□ -1.94
TRAPPC11-208ENST00000511955 LINC00158P58513 81 aa2.96□□□□□ -1.94
TRAPPC11-208ENST00000511955 COX6A2Q02221 97 aa2.96□□□□□ -1.94
TRAPPC11-208ENST00000511955 Q8N9L7 120 aa2.96□□□□□ -1.94
TRAPPC11-208ENST00000511955 PKD1P98161 4303 aa2.95□□□□□ -1.94
TRAPPC11-208ENST00000511955 LINC00575Q6W349 94 aa2.95□□□□□ -1.94
TRAPPC11-208ENST00000511955 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
TRAPPC11-208ENST00000511955 KCNQ1DNQ9H478 68 aa2.94□□□□□ -1.94
TRAPPC11-208ENST00000511955 COA5Q86WW8 74 aa2.94□□□□□ -1.94
TRAPPC11-208ENST00000511955 Q6ZRN7 208 aaPredicted RBP2.93□□□□□ -1.94
TRAPPC11-208ENST00000511955 SPRR4Q96PI1 79 aa2.93□□□□□ -1.94
TRAPPC11-208ENST00000511955 DNAH6Q9C0G6 4158 aa2.93□□□□□ -1.94
TRAPPC11-208ENST00000511955 PRO2289Q9P1D8 64 aa2.93□□□□□ -1.94
TRAPPC11-208ENST00000511955 KRTAP10-2P60368 255 aa2.92□□□□□ -1.94
TRAPPC11-208ENST00000511955 DNAH17Q9UFH2 4485 aa2.92□□□□□ -1.94
TRAPPC11-208ENST00000511955 A0A087WTM6 91 aa2.92□□□□□ -1.94
TRAPPC11-208ENST00000511955 SPATA8Q6RVD6 105 aa2.92□□□□□ -1.94
TRAPPC11-208ENST00000511955 LINC00959A0A1B0GUT2 108 aa2.91□□□□□ -1.94
TRAPPC11-208ENST00000511955 KIAA1109Q2LD37 5005 aa2.9□□□□□ -1.94
TRAPPC11-208ENST00000511955 A0A1B0GVY2 172 aa2.9□□□□□ -1.95
TRAPPC11-208ENST00000511955 Q6ZQY7 126 aa2.9□□□□□ -1.95
TRAPPC11-208ENST00000511955 DNAH11Q96DT5 4516 aa2.9□□□□□ -1.95
TRAPPC11-208ENST00000511955 A0A0G2JQZ4 141 aa2.9□□□□□ -1.95
TRAPPC11-208ENST00000511955 TOMM7Q9P0U1 55 aa2.9□□□□□ -1.95
TRAPPC11-208ENST00000511955 PSORS1C2Q9UIG4 136 aa2.9□□□□□ -1.95
TRAPPC11-208ENST00000511955 LINC00304Q8N9R0 145 aa2.88□□□□□ -1.95
TRAPPC11-208ENST00000511955 SRRM2Q9UQ35 2752 aaKnown RBP2.88□□□□□ -1.95
TRAPPC11-208ENST00000511955 IGKV2-30P06310 120 aa2.88□□□□□ -1.95
TRAPPC11-208ENST00000511955 KRTAP10-1P60331 282 aa2.87□□□□□ -1.95
TRAPPC11-208ENST00000511955 DNAH5Q8TE73 4624 aa2.87□□□□□ -1.95
TRAPPC11-208ENST00000511955 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
TRAPPC11-208ENST00000511955 RPL37AP61513 92 aaKnown RBP2.87□□□□□ -1.95
TRAPPC11-208ENST00000511955 DYNC1H1Q14204 4646 aaKnown RBP2.87□□□□□ -1.95
TRAPPC11-208ENST00000511955 LRP1BQ9NZR2 4599 aa2.86□□□□□ -1.95
TRAPPC11-208ENST00000511955 SMR3BP02814 79 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC11-208ENST00000511955 HRES1P13985 223 aa2.86□□□□□ -1.95
TRAPPC11-208ENST00000511955 LINC00472Q9H8W2 130 aa2.86□□□□□ -1.95
TRAPPC11-208ENST00000511955 IGKV2-24A0A0C4DH68 120 aa2.86□□□□□ -1.95
TRAPPC11-208ENST00000511955 KRTAP9-7A8MTY7 169 aa2.86□□□□□ -1.95
TRAPPC11-208ENST00000511955 C14orf177Q52M58 125 aa2.86□□□□□ -1.95
TRAPPC11-208ENST00000511955 Q96NJ1 140 aa2.86□□□□□ -1.95
TRAPPC11-208ENST00000511955 LCE4AQ5TA78 99 aa2.85□□□□□ -1.95
TRAPPC11-208ENST00000511955 BIRC6Q9NR09 4857 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms