RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 KRTAP26-1Q6PEX3 210 aa2.76□□□□□ -1.97
HMGB3P13-201ENST00000511263 WFDC13Q8IUB5 93 aa2.76□□□□□ -1.97
HMGB3P13-201ENST00000511263 BAHCC1Q9P281 2608 aa2.76□□□□□ -1.97
HMGB3P13-201ENST00000511263 ZNF469Q96JG9 3925 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 SVEP1Q4LDE5 3571 aa2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 A8MUU9 505 aa2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 INSP01308 110 aa2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 ANGP03950 147 aaKnown RBP2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 DEFB131AP59861 70 aa2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 DEFB136Q30KP8 78 aa2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 Q5W150 140 aa2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 WFDC10BQ8IUB3 73 aa2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 ABCA2Q9BZC7 2435 aa2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 OTOGQ6ZRI0 2925 aa2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 CSMD2Q7Z408 3487 aa2.74□□□□□ -1.97
HMGB3P13-201ENST00000511263 MAP1AP78559 2803 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P13-201ENST00000511263 GVQW2A0A096LPI5 108 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P13-201ENST00000511263 IGKV3OR2-268A0A0C4DH90 116 aa2.74□□□□□ -1.97
HMGB3P13-201ENST00000511263 SPINT4Q6UDR6 99 aa2.74□□□□□ -1.97
HMGB3P13-201ENST00000511263 SORL1Q92673 2214 aa2.74□□□□□ -1.97
HMGB3P13-201ENST00000511263 FN1P02751 2386 aaKnown RBP2.74□□□□□ -1.97
HMGB3P13-201ENST00000511263 FLNAP21333 2647 aaKnown RBP2.73□□□□□ -1.97
HMGB3P13-201ENST00000511263 MXRA5Q9NR99 2828 aa2.73□□□□□ -1.97
HMGB3P13-201ENST00000511263 AKAP9Q99996 3911 aa2.73□□□□□ -1.97
HMGB3P13-201ENST00000511263 F8P00451 2351 aa2.73□□□□□ -1.97
HMGB3P13-201ENST00000511263 SONP18583 2426 aaKnown RBP2.72□□□□□ -1.97
HMGB3P13-201ENST00000511263 SPINK13Q1W4C9 94 aa2.72□□□□□ -1.97
HMGB3P13-201ENST00000511263 C6orf48Q9UBA6 75 aa2.72□□□□□ -1.97
HMGB3P13-201ENST00000511263 TLN2Q9Y4G6 2542 aa2.72□□□□□ -1.97
HMGB3P13-201ENST00000511263 A0A1B0GVX0 72 aa2.71□□□□□ -1.98
HMGB3P13-201ENST00000511263 IGLV7-43P04211 117 aa2.71□□□□□ -1.98
HMGB3P13-201ENST00000511263 PCOTHQ58A44 107 aa2.71□□□□□ -1.98
HMGB3P13-201ENST00000511263 C2CD3Q4AC94 2353 aa2.7□□□□□ -1.98
HMGB3P13-201ENST00000511263 IGKV2-24A0A0C4DH68 120 aa2.7□□□□□ -1.98
HMGB3P13-201ENST00000511263 H3BNG1 76 aa2.7□□□□□ -1.98
HMGB3P13-201ENST00000511263 SPART-AS1P0CW21 52 aa2.7□□□□□ -1.98
HMGB3P13-201ENST00000511263 CIRBP-AS1Q8TBR5 109 aa2.7□□□□□ -1.98
HMGB3P13-201ENST00000511263 LINC00472Q9H8W2 130 aa2.7□□□□□ -1.98
HMGB3P13-201ENST00000511263 ZANQ9Y493 2812 aa2.7□□□□□ -1.98
HMGB3P13-201ENST00000511263 MTORP42345 2549 aa2.7□□□□□ -1.98
HMGB3P13-201ENST00000511263 JMJD1CQ15652 2540 aa2.69□□□□□ -1.98
HMGB3P13-201ENST00000511263 NIPBLQ6KC79 2804 aaeCLIP2.69□□□□□ -1.98
HMGB3P13-201ENST00000511263 ANK3Q12955 4377 aaKnown RBP2.69□□□□□ -1.98
HMGB3P13-201ENST00000511263 DEFB1P60022 68 aa2.68□□□□□ -1.98
HMGB3P13-201ENST00000511263 KRTAP10-1P60331 282 aa2.68□□□□□ -1.98
HMGB3P13-201ENST00000511263 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
HMGB3P13-201ENST00000511263 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
HMGB3P13-201ENST00000511263 NSD1Q96L73 2696 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P13-201ENST00000511263 A0A087WTM6 91 aa2.67□□□□□ -1.98
HMGB3P13-201ENST00000511263 PRO0255Q9UI72 69 aa2.67□□□□□ -1.98
HMGB3P13-201ENST00000511263 PANO1I0J062 215 aa2.66□□□□□ -1.98
HMGB3P13-201ENST00000511263 LY6G6CO95867 125 aa2.66□□□□□ -1.98
HMGB3P13-201ENST00000511263 HTN1P15515 57 aa2.66□□□□□ -1.98
HMGB3P13-201ENST00000511263 SETXQ7Z333 2677 aaKnown RBP2.66□□□□□ -1.98
HMGB3P13-201ENST00000511263 ATRQ13535 2644 aa2.66□□□□□ -1.98
HMGB3P13-201ENST00000511263 NF1P21359 2839 aa2.65□□□□□ -1.98
HMGB3P13-201ENST00000511263 MMP24-AS1A0A0U1RRL7 71 aa2.65□□□□□ -1.99
HMGB3P13-201ENST00000511263 K7EIL1 84 aa2.65□□□□□ -1.99
HMGB3P13-201ENST00000511263 DEFB116Q30KQ4 102 aa2.65□□□□□ -1.99
HMGB3P13-201ENST00000511263 Q6ZRX8 168 aa2.65□□□□□ -1.99
HMGB3P13-201ENST00000511263 C15orf56Q8N910 161 aa2.65□□□□□ -1.99
HMGB3P13-201ENST00000511263 NOP10Q9NPE3 64 aaKnown RBP2.65□□□□□ -1.99
HMGB3P13-201ENST00000511263 TEP1Q99973 2627 aaKnown RBP2.65□□□□□ -1.99
HMGB3P13-201ENST00000511263 SSBP3-AS1Q7Z2R9 100 aa2.64□□□□□ -1.99
HMGB3P13-201ENST00000511263 LINC00304Q8N9R0 145 aa2.64□□□□□ -1.99
HMGB3P13-201ENST00000511263 DEFB105AQ8NG35 78 aa2.64□□□□□ -1.99
HMGB3P13-201ENST00000511263 COL6A5A8TX70 2615 aa2.64□□□□□ -1.99
HMGB3P13-201ENST00000511263 MAST4O15021 2626 aa2.64□□□□□ -1.99
HMGB3P13-201ENST00000511263 CELSR1Q9NYQ6 3014 aa2.63□□□□□ -1.99
HMGB3P13-201ENST00000511263 SETD2Q9BYW2 2564 aaPredicted RBP2.63□□□□□ -1.99
HMGB3P13-201ENST00000511263 RPL37AP61513 92 aaKnown RBP2.63□□□□□ -1.99
HMGB3P13-201ENST00000511263 DEFB135Q30KP9 77 aa2.63□□□□□ -1.99
HMGB3P13-201ENST00000511263 FBN1P35555 2871 aaKnown RBP2.63□□□□□ -1.99
HMGB3P13-201ENST00000511263 CUBNO60494 3623 aa2.62□□□□□ -1.99
HMGB3P13-201ENST00000511263 NBDYA0A0U1RRE5 68 aa2.62□□□□□ -1.99
HMGB3P13-201ENST00000511263 DEFB130BP0DP73 79 aa2.62□□□□□ -1.99
HMGB3P13-201ENST00000511263 DEFB130AP0DP74 79 aa2.62□□□□□ -1.99
HMGB3P13-201ENST00000511263 Q96NJ1 140 aa2.62□□□□□ -1.99
HMGB3P13-201ENST00000511263 WNK1Q9H4A3 2382 aa2.62□□□□□ -1.99
HMGB3P13-201ENST00000511263 IGFL1Q6UW32 110 aa2.61□□□□□ -1.99
HMGB3P13-201ENST00000511263 UNQ6190/PRO20217Q6UXQ8 127 aa2.61□□□□□ -1.99
HMGB3P13-201ENST00000511263 LELP1Q5T871 98 aa2.6□□□□□ -1.99
HMGB3P13-201ENST00000511263 CLPSL2Q6UWE3 100 aa2.6□□□□□ -1.99
HMGB3P13-201ENST00000511263 MRPL34Q9BQ48 92 aaKnown RBP2.6□□□□□ -1.99
HMGB3P13-201ENST00000511263 A0A0G2JQZ4 141 aa2.59□□□□□ -1.99
HMGB3P13-201ENST00000511263 A0A1B0GU33 70 aa2.59□□□□□ -1.99
HMGB3P13-201ENST00000511263 SPRR1AP35321 89 aa2.59□□□□□ -1.99
HMGB3P13-201ENST00000511263 TRRAPQ9Y4A5 3859 aa2.59□□□□□ -1.99
HMGB3P13-201ENST00000511263 A0A1W2PNN7 141 aa2.58□□□□□ -2
HMGB3P13-201ENST00000511263 PSORS1C2Q9UIG4 136 aa2.58□□□□□ -2
HMGB3P13-201ENST00000511263 A0A096LPF7 62 aa2.57□□□□□ -2
HMGB3P13-201ENST00000511263 DEFB4AO15263 64 aa2.56□□□□□ -2
HMGB3P13-201ENST00000511263 LINC01556Q5JQF7 62 aa2.56□□□□□ -2
HMGB3P13-201ENST00000511263 COX6B2Q6YFQ2 88 aa2.56□□□□□ -2
HMGB3P13-201ENST00000511263 APLNQ9ULZ1 77 aa2.56□□□□□ -2
HMGB3P13-201ENST00000511263 STAB1Q9NY15 2570 aa2.56□□□□□ -2
HMGB3P13-201ENST00000511263 KRTAP5-8O75690 187 aa2.55□□□□□ -2
HMGB3P13-201ENST00000511263 TENM1Q9UKZ4 2725 aa2.55□□□□□ -2
HMGB3P13-201ENST00000511263 HTN3P15516 51 aa2.54□□□□□ -2
HMGB3P13-201ENST00000511263 CRIPTQ9P021 101 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms