RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 KRTAP26-1Q6PEX3 210 aa2.76□□□□□ -1.97
HMGB3P13-201ENST00000511263 WFDC13Q8IUB5 93 aa2.76□□□□□ -1.97
HMGB3P13-201ENST00000511263 BAHCC1Q9P281 2608 aa2.76□□□□□ -1.97
HMGB3P13-201ENST00000511263 ZNF469Q96JG9 3925 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 SVEP1Q4LDE5 3571 aa2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 A8MUU9 505 aa2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 INSP01308 110 aa2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 ANGP03950 147 aaKnown RBP2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 DEFB131AP59861 70 aa2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 DEFB136Q30KP8 78 aa2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 Q5W150 140 aa2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 WFDC10BQ8IUB3 73 aa2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 ABCA2Q9BZC7 2435 aa2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 OTOGQ6ZRI0 2925 aa2.75□□□□□ -1.97
HMGB3P13-201ENST00000511263 CSMD2Q7Z408 3487 aa2.74□□□□□ -1.97
HMGB3P13-201ENST00000511263 MAP1AP78559 2803 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P13-201ENST00000511263 GVQW2A0A096LPI5 108 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P13-201ENST00000511263 IGKV3OR2-268A0A0C4DH90 116 aa2.74□□□□□ -1.97
HMGB3P13-201ENST00000511263 SPINT4Q6UDR6 99 aa2.74□□□□□ -1.97
HMGB3P13-201ENST00000511263 SORL1Q92673 2214 aa2.74□□□□□ -1.97
HMGB3P13-201ENST00000511263 FN1P02751 2386 aaKnown RBP2.74□□□□□ -1.97
HMGB3P13-201ENST00000511263 FLNAP21333 2647 aaKnown RBP2.73□□□□□ -1.97
HMGB3P13-201ENST00000511263 MXRA5Q9NR99 2828 aa2.73□□□□□ -1.97
HMGB3P13-201ENST00000511263 AKAP9Q99996 3911 aa2.73□□□□□ -1.97
HMGB3P13-201ENST00000511263 F8P00451 2351 aa2.73□□□□□ -1.97
HMGB3P13-201ENST00000511263 SONP18583 2426 aaKnown RBP2.72□□□□□ -1.97
HMGB3P13-201ENST00000511263 SPINK13Q1W4C9 94 aa2.72□□□□□ -1.97
HMGB3P13-201ENST00000511263 C6orf48Q9UBA6 75 aa2.72□□□□□ -1.97
HMGB3P13-201ENST00000511263 TLN2Q9Y4G6 2542 aa2.72□□□□□ -1.97
HMGB3P13-201ENST00000511263 A0A1B0GVX0 72 aa2.71□□□□□ -1.98
HMGB3P13-201ENST00000511263 IGLV7-43P04211 117 aa2.71□□□□□ -1.98
HMGB3P13-201ENST00000511263 PCOTHQ58A44 107 aa2.71□□□□□ -1.98
HMGB3P13-201ENST00000511263 C2CD3Q4AC94 2353 aa2.7□□□□□ -1.98
HMGB3P13-201ENST00000511263 IGKV2-24A0A0C4DH68 120 aa2.7□□□□□ -1.98
HMGB3P13-201ENST00000511263 H3BNG1 76 aa2.7□□□□□ -1.98
HMGB3P13-201ENST00000511263 SPART-AS1P0CW21 52 aa2.7□□□□□ -1.98
HMGB3P13-201ENST00000511263 CIRBP-AS1Q8TBR5 109 aa2.7□□□□□ -1.98
HMGB3P13-201ENST00000511263 LINC00472Q9H8W2 130 aa2.7□□□□□ -1.98
HMGB3P13-201ENST00000511263 ZANQ9Y493 2812 aa2.7□□□□□ -1.98
HMGB3P13-201ENST00000511263 MTORP42345 2549 aa2.7□□□□□ -1.98
HMGB3P13-201ENST00000511263 JMJD1CQ15652 2540 aa2.69□□□□□ -1.98
HMGB3P13-201ENST00000511263 NIPBLQ6KC79 2804 aaeCLIP2.69□□□□□ -1.98
HMGB3P13-201ENST00000511263 ANK3Q12955 4377 aaKnown RBP2.69□□□□□ -1.98
HMGB3P13-201ENST00000511263 DEFB1P60022 68 aa2.68□□□□□ -1.98
HMGB3P13-201ENST00000511263 KRTAP10-1P60331 282 aa2.68□□□□□ -1.98
HMGB3P13-201ENST00000511263 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
HMGB3P13-201ENST00000511263 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
HMGB3P13-201ENST00000511263 NSD1Q96L73 2696 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P13-201ENST00000511263 A0A087WTM6 91 aa2.67□□□□□ -1.98
HMGB3P13-201ENST00000511263 PRO0255Q9UI72 69 aa2.67□□□□□ -1.98
HMGB3P13-201ENST00000511263 PANO1I0J062 215 aa2.66□□□□□ -1.98
HMGB3P13-201ENST00000511263 LY6G6CO95867 125 aa2.66□□□□□ -1.98
HMGB3P13-201ENST00000511263 HTN1P15515 57 aa2.66□□□□□ -1.98
HMGB3P13-201ENST00000511263 SETXQ7Z333 2677 aaKnown RBP2.66□□□□□ -1.98
HMGB3P13-201ENST00000511263 ATRQ13535 2644 aa2.66□□□□□ -1.98
HMGB3P13-201ENST00000511263 NF1P21359 2839 aa2.65□□□□□ -1.98
HMGB3P13-201ENST00000511263 MMP24-AS1A0A0U1RRL7 71 aa2.65□□□□□ -1.99
HMGB3P13-201ENST00000511263 K7EIL1 84 aa2.65□□□□□ -1.99
HMGB3P13-201ENST00000511263 DEFB116Q30KQ4 102 aa2.65□□□□□ -1.99
HMGB3P13-201ENST00000511263 Q6ZRX8 168 aa2.65□□□□□ -1.99
HMGB3P13-201ENST00000511263 C15orf56Q8N910 161 aa2.65□□□□□ -1.99
HMGB3P13-201ENST00000511263 NOP10Q9NPE3 64 aaKnown RBP2.65□□□□□ -1.99
HMGB3P13-201ENST00000511263 TEP1Q99973 2627 aaKnown RBP2.65□□□□□ -1.99
HMGB3P13-201ENST00000511263 SSBP3-AS1Q7Z2R9 100 aa2.64□□□□□ -1.99
HMGB3P13-201ENST00000511263 LINC00304Q8N9R0 145 aa2.64□□□□□ -1.99
HMGB3P13-201ENST00000511263 DEFB105AQ8NG35 78 aa2.64□□□□□ -1.99
HMGB3P13-201ENST00000511263 COL6A5A8TX70 2615 aa2.64□□□□□ -1.99
HMGB3P13-201ENST00000511263 MAST4O15021 2626 aa2.64□□□□□ -1.99
HMGB3P13-201ENST00000511263 CELSR1Q9NYQ6 3014 aa2.63□□□□□ -1.99
HMGB3P13-201ENST00000511263 SETD2Q9BYW2 2564 aaPredicted RBP2.63□□□□□ -1.99
HMGB3P13-201ENST00000511263 RPL37AP61513 92 aaKnown RBP2.63□□□□□ -1.99
HMGB3P13-201ENST00000511263 DEFB135Q30KP9 77 aa2.63□□□□□ -1.99
HMGB3P13-201ENST00000511263 FBN1P35555 2871 aaKnown RBP2.63□□□□□ -1.99
HMGB3P13-201ENST00000511263 CUBNO60494 3623 aa2.62□□□□□ -1.99
HMGB3P13-201ENST00000511263 NBDYA0A0U1RRE5 68 aa2.62□□□□□ -1.99
HMGB3P13-201ENST00000511263 DEFB130BP0DP73 79 aa2.62□□□□□ -1.99
HMGB3P13-201ENST00000511263 DEFB130AP0DP74 79 aa2.62□□□□□ -1.99
HMGB3P13-201ENST00000511263 Q96NJ1 140 aa2.62□□□□□ -1.99
HMGB3P13-201ENST00000511263 WNK1Q9H4A3 2382 aa2.62□□□□□ -1.99
HMGB3P13-201ENST00000511263 IGFL1Q6UW32 110 aa2.61□□□□□ -1.99
HMGB3P13-201ENST00000511263 UNQ6190/PRO20217Q6UXQ8 127 aa2.61□□□□□ -1.99
HMGB3P13-201ENST00000511263 LELP1Q5T871 98 aa2.6□□□□□ -1.99
HMGB3P13-201ENST00000511263 CLPSL2Q6UWE3 100 aa2.6□□□□□ -1.99
HMGB3P13-201ENST00000511263 MRPL34Q9BQ48 92 aaKnown RBP2.6□□□□□ -1.99
HMGB3P13-201ENST00000511263 A0A0G2JQZ4 141 aa2.59□□□□□ -1.99
HMGB3P13-201ENST00000511263 A0A1B0GU33 70 aa2.59□□□□□ -1.99
HMGB3P13-201ENST00000511263 SPRR1AP35321 89 aa2.59□□□□□ -1.99
HMGB3P13-201ENST00000511263 TRRAPQ9Y4A5 3859 aa2.59□□□□□ -1.99
HMGB3P13-201ENST00000511263 A0A1W2PNN7 141 aa2.58□□□□□ -2
HMGB3P13-201ENST00000511263 PSORS1C2Q9UIG4 136 aa2.58□□□□□ -2
HMGB3P13-201ENST00000511263 A0A096LPF7 62 aa2.57□□□□□ -2
HMGB3P13-201ENST00000511263 DEFB4AO15263 64 aa2.56□□□□□ -2
HMGB3P13-201ENST00000511263 LINC01556Q5JQF7 62 aa2.56□□□□□ -2
HMGB3P13-201ENST00000511263 COX6B2Q6YFQ2 88 aa2.56□□□□□ -2
HMGB3P13-201ENST00000511263 APLNQ9ULZ1 77 aa2.56□□□□□ -2
HMGB3P13-201ENST00000511263 STAB1Q9NY15 2570 aa2.56□□□□□ -2
HMGB3P13-201ENST00000511263 KRTAP5-8O75690 187 aa2.55□□□□□ -2
HMGB3P13-201ENST00000511263 TENM1Q9UKZ4 2725 aa2.55□□□□□ -2
HMGB3P13-201ENST00000511263 HTN3P15516 51 aa2.54□□□□□ -2
HMGB3P13-201ENST00000511263 CRIPTQ9P021 101 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms