RNA–Protein interactions for RNA: ENST00000510948.1

SMAD1-208, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-208ENST00000510948 C1orf137Q5JT78 98 aa2.42□□□□□ -2.02
SMAD1-208ENST00000510948 DPH3Q96FX2 82 aa2.42□□□□□ -2.02
SMAD1-208ENST00000510948 EPPK1P58107 5090 aaKnown RBP2.42□□□□□ -2.02
SMAD1-208ENST00000510948 VPS13BQ7Z7G8 4022 aa2.42□□□□□ -2.02
SMAD1-208ENST00000510948 TRBV7-4A0A0J9YYF1 115 aa2.41□□□□□ -2.02
SMAD1-208ENST00000510948 K7ERU9 68 aa2.41□□□□□ -2.02
SMAD1-208ENST00000510948 C3orf22Q8N5N4 141 aa2.41□□□□□ -2.02
SMAD1-208ENST00000510948 C14orf132Q9NPU4 83 aa2.41□□□□□ -2.02
SMAD1-208ENST00000510948 LAMTOR3Q9UHA4 124 aa2.41□□□□□ -2.02
SMAD1-208ENST00000510948 ZNF706Q9Y5V0 76 aaPredicted RBP2.41□□□□□ -2.02
SMAD1-208ENST00000510948 RYR1P21817 5038 aa2.4□□□□□ -2.02
SMAD1-208ENST00000510948 LOC110117498A0A087WWA1 95 aa2.4□□□□□ -2.03
SMAD1-208ENST00000510948 A0A1B0GV72 72 aa2.4□□□□□ -2.03
SMAD1-208ENST00000510948 A8MUU9 505 aa2.4□□□□□ -2.03
SMAD1-208ENST00000510948 J3QR89 54 aa2.4□□□□□ -2.03
SMAD1-208ENST00000510948 KRTAP10-4P60372 401 aaPredicted RBP2.4□□□□□ -2.03
SMAD1-208ENST00000510948 SPRR4Q96PI1 79 aa2.4□□□□□ -2.03
SMAD1-208ENST00000510948 SRRM2Q9UQ35 2752 aaKnown RBP2.4□□□□□ -2.03
SMAD1-208ENST00000510948 KIAA1109Q2LD37 5005 aa2.4□□□□□ -2.03
SMAD1-208ENST00000510948 PKHD1L1Q86WI1 4243 aa2.39□□□□□ -2.03
SMAD1-208ENST00000510948 RPL37AP61513 92 aaKnown RBP2.39□□□□□ -2.03
SMAD1-208ENST00000510948 RBM3P98179 157 aaKnown RBP2.39□□□□□ -2.03
SMAD1-208ENST00000510948 Q6ZQT0 140 aa2.39□□□□□ -2.03
SMAD1-208ENST00000510948 DEFB105AQ8NG35 78 aa2.39□□□□□ -2.03
SMAD1-208ENST00000510948 HSPG2P98160 4391 aa2.39□□□□□ -2.03
SMAD1-208ENST00000510948 F8WEM9 126 aa2.38□□□□□ -2.03
SMAD1-208ENST00000510948 PDE6GP18545 87 aa2.38□□□□□ -2.03
SMAD1-208ENST00000510948 DSCR8Q96T75 97 aa2.38□□□□□ -2.03
SMAD1-208ENST00000510948 RBM12B-AS1Q9P1G2 102 aa2.38□□□□□ -2.03
SMAD1-208ENST00000510948 FAT1Q14517 4588 aa2.37□□□□□ -2.03
SMAD1-208ENST00000510948 SMR3BP02814 79 aaPredicted RBP2.37□□□□□ -2.03
SMAD1-208ENST00000510948 CCKP06307 115 aa2.37□□□□□ -2.03
SMAD1-208ENST00000510948 ACYP1P07311 99 aa2.37□□□□□ -2.03
SMAD1-208ENST00000510948 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
SMAD1-208ENST00000510948 IGFL1Q6UW32 110 aa2.37□□□□□ -2.03
SMAD1-208ENST00000510948 A0A1W2PNM2 257 aa2.36□□□□□ -2.03
SMAD1-208ENST00000510948 FAM229BQ4G0N7 80 aa2.36□□□□□ -2.03
SMAD1-208ENST00000510948 C9orf153Q5TBE3 101 aa2.36□□□□□ -2.03
SMAD1-208ENST00000510948 Q6JHZ5 121 aa2.36□□□□□ -2.03
SMAD1-208ENST00000510948 Q6Q795 121 aa2.36□□□□□ -2.03
SMAD1-208ENST00000510948 SPINK6Q6UWN8 80 aa2.36□□□□□ -2.03
SMAD1-208ENST00000510948 ANAPC13Q9BS18 74 aa2.36□□□□□ -2.03
SMAD1-208ENST00000510948 A0A1B0GW54 56 aa2.35□□□□□ -2.03
SMAD1-208ENST00000510948 Q5VSD8 79 aa2.35□□□□□ -2.03
SMAD1-208ENST00000510948 VPS25Q9BRG1 176 aa2.35□□□□□ -2.03
SMAD1-208ENST00000510948 LINC00846Q9NV44 126 aa2.35□□□□□ -2.03
SMAD1-208ENST00000510948 A0A0G2JQZ4 141 aa2.34□□□□□ -2.03
SMAD1-208ENST00000510948 TRBV7-7A0A0K0K1E9 115 aa2.34□□□□□ -2.03
SMAD1-208ENST00000510948 CRYGAP11844 174 aa2.34□□□□□ -2.03
SMAD1-208ENST00000510948 KRTAP13-2Q52LG2 175 aa2.34□□□□□ -2.03
SMAD1-208ENST00000510948 SPINT4Q6UDR6 99 aa2.34□□□□□ -2.03
SMAD1-208ENST00000510948 UBL5Q9BZL1 73 aa2.34□□□□□ -2.03
SMAD1-208ENST00000510948 A0A087WSZ3 146 aa2.33□□□□□ -2.04
SMAD1-208ENST00000510948 ATP5EP2Q5VTU8 51 aa2.33□□□□□ -2.04
SMAD1-208ENST00000510948 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
SMAD1-208ENST00000510948 BIRC6Q9NR09 4857 aa2.33□□□□□ -2.04
SMAD1-208ENST00000510948 MT-ATP8P03928 68 aa2.32□□□□□ -2.04
SMAD1-208ENST00000510948 KRTAP5-9P26371 169 aa2.32□□□□□ -2.04
SMAD1-208ENST00000510948 SSBP3-AS1Q7Z2R9 100 aa2.32□□□□□ -2.04
SMAD1-208ENST00000510948 LINC00643Q86TS7 51 aa2.32□□□□□ -2.04
SMAD1-208ENST00000510948 SS18L2Q9UHA2 77 aa2.32□□□□□ -2.04
SMAD1-208ENST00000510948 SPRR5A0A1B0GTR4 108 aa2.31□□□□□ -2.04
SMAD1-208ENST00000510948 TNXBP22105 4242 aa2.31□□□□□ -2.04
SMAD1-208ENST00000510948 FAT3Q8TDW7 4589 aa2.3□□□□□ -2.04
SMAD1-208ENST00000510948 C8orf87E5RJ46 101 aa2.3□□□□□ -2.04
SMAD1-208ENST00000510948 K7ERS5 55 aa2.3□□□□□ -2.04
SMAD1-208ENST00000510948 RPS29P62273 56 aaKnown RBP2.3□□□□□ -2.04
SMAD1-208ENST00000510948 NREPQ16612 68 aa2.3□□□□□ -2.04
SMAD1-208ENST00000510948 KRTAP13-3Q3SY46 172 aa2.3□□□□□ -2.04
SMAD1-208ENST00000510948 Q5XG85 94 aa2.3□□□□□ -2.04
SMAD1-208ENST00000510948 Q96NJ1 140 aa2.3□□□□□ -2.04
SMAD1-208ENST00000510948 SIGMAR1Q99720 223 aa2.3□□□□□ -2.04
SMAD1-208ENST00000510948 FLG2Q5D862 2391 aaPredicted RBP2.3□□□□□ -2.04
SMAD1-208ENST00000510948 ABCA13Q86UQ4 5058 aa2.3□□□□□ -2.04
SMAD1-208ENST00000510948 MYCBP2O75592 4640 aa2.29□□□□□ -2.04
SMAD1-208ENST00000510948 LRP1Q07954 4544 aaKnown RBP2.29□□□□□ -2.04
SMAD1-208ENST00000510948 HERC2O95714 4834 aa2.29□□□□□ -2.04
SMAD1-208ENST00000510948 IGKV3D-7A0A0C4DH55 119 aa2.29□□□□□ -2.04
SMAD1-208ENST00000510948 ASB16-AS1Q495Z4 193 aa2.29□□□□□ -2.04
SMAD1-208ENST00000510948 HRCT1Q6UXD1 115 aa2.29□□□□□ -2.04
SMAD1-208ENST00000510948 LINC00304Q8N9R0 145 aa2.29□□□□□ -2.04
SMAD1-208ENST00000510948 LIMD2Q9BT23 127 aa2.29□□□□□ -2.04
SMAD1-208ENST00000510948 IMUPQ9GZP8 106 aa2.29□□□□□ -2.04
SMAD1-208ENST00000510948 LINC00472Q9H8W2 130 aa2.29□□□□□ -2.04
SMAD1-208ENST00000510948 A0A087WVE0 104 aa2.28□□□□□ -2.04
SMAD1-208ENST00000510948 K7EQZ3 153 aa2.28□□□□□ -2.04
SMAD1-208ENST00000510948 SPINK1P00995 79 aa2.28□□□□□ -2.04
SMAD1-208ENST00000510948 IGKV4-1P06312 121 aa2.28□□□□□ -2.04
SMAD1-208ENST00000510948 SCGB1A1P11684 91 aa2.28□□□□□ -2.04
SMAD1-208ENST00000510948 FAM236AA0A1B0GUQ0 79 aa2.27□□□□□ -2.05
SMAD1-208ENST00000510948 FAM236BA0A1B0GV22 79 aa2.27□□□□□ -2.05
SMAD1-208ENST00000510948 J3KT08 172 aa2.27□□□□□ -2.05
SMAD1-208ENST00000510948 HIST1H4AP62805 103 aaKnown RBP2.27□□□□□ -2.05
SMAD1-208ENST00000510948 SPAG11AQ6PDA7 123 aa2.27□□□□□ -2.05
SMAD1-208ENST00000510948 C1orf64Q8NEQ6 169 aa2.27□□□□□ -2.05
SMAD1-208ENST00000510948 A8MWP4 228 aa2.26□□□□□ -2.05
SMAD1-208ENST00000510948 MT1HL1P0DM35 61 aa2.26□□□□□ -2.05
SMAD1-208ENST00000510948 MP68P56378 58 aa2.26□□□□□ -2.05
SMAD1-208ENST00000510948 KRTAP10-8P60410 259 aa2.26□□□□□ -2.05
SMAD1-208ENST00000510948 MMP24-AS1A0A0U1RRL7 71 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms