RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 NOTCH1P46531 2555 aa5.96□□□□□ -1.46
PDGFRA-207ENST00000509092 CMYA5Q8N3K9 4069 aa5.96□□□□□ -1.46
PDGFRA-207ENST00000509092 MGAM2Q2M2H8 2515 aa5.95□□□□□ -1.46
PDGFRA-207ENST00000509092 NBEAL1Q6ZS30 2694 aa5.95□□□□□ -1.46
PDGFRA-207ENST00000509092 NOTCH2NLQ7Z3S9 236 aa5.95□□□□□ -1.46
PDGFRA-207ENST00000509092 KRTAP11-1Q8IUC1 163 aa5.94□□□□□ -1.46
PDGFRA-207ENST00000509092 IGLV7-43P04211 117 aa5.9□□□□□ -1.46
PDGFRA-207ENST00000509092 IGLV9-49A0A0B4J1Y8 123 aa5.9□□□□□ -1.47
PDGFRA-207ENST00000509092 DNAH1Q9P2D7 4330 aa5.89□□□□□ -1.47
PDGFRA-207ENST00000509092 SRRM2Q9UQ35 2752 aaKnown RBP5.89□□□□□ -1.47
PDGFRA-207ENST00000509092 CHTF8P0CG12 524 aa5.88□□□□□ -1.47
PDGFRA-207ENST00000509092 A8MUU9 505 aa5.87□□□□□ -1.47
PDGFRA-207ENST00000509092 IGLV5-52A0A0A0MRZ9 124 aa5.87□□□□□ -1.47
PDGFRA-207ENST00000509092 KRTAP10-11P60412 298 aa5.87□□□□□ -1.47
PDGFRA-207ENST00000509092 KRTAP13-1Q8IUC0 172 aa5.87□□□□□ -1.47
PDGFRA-207ENST00000509092 DNHD1Q96M86 4753 aa5.87□□□□□ -1.47
PDGFRA-207ENST00000509092 KRTAP21-3Q3LHN1 58 aa5.86□□□□□ -1.47
PDGFRA-207ENST00000509092 DNAH3Q8TD57 4116 aa5.86□□□□□ -1.47
PDGFRA-207ENST00000509092 P0C880 135 aa5.84□□□□□ -1.47
PDGFRA-207ENST00000509092 J3QL48 77 aa5.84□□□□□ -1.48
PDGFRA-207ENST00000509092 IGKV2-30P06310 120 aa5.84□□□□□ -1.48
PDGFRA-207ENST00000509092 LINC00483Q53H64 154 aa5.84□□□□□ -1.48
PDGFRA-207ENST00000509092 FAM229AH3BQW9 127 aa5.82□□□□□ -1.48
PDGFRA-207ENST00000509092 LCE2BO14633 110 aa5.82□□□□□ -1.48
PDGFRA-207ENST00000509092 LINC00304Q8N9R0 145 aa5.82□□□□□ -1.48
PDGFRA-207ENST00000509092 CSMD3Q7Z407 3707 aa5.81□□□□□ -1.48
PDGFRA-207ENST00000509092 WWC2-AS2Q96NR7 200 aa5.78□□□□□ -1.48
PDGFRA-207ENST00000509092 TENM3Q9P273 2699 aa5.78□□□□□ -1.48
PDGFRA-207ENST00000509092 LY6G6CO95867 125 aa5.78□□□□□ -1.48
PDGFRA-207ENST00000509092 SPINK6Q6UWN8 80 aa5.78□□□□□ -1.48
PDGFRA-207ENST00000509092 H0YAA0 97 aa5.76□□□□□ -1.49
PDGFRA-207ENST00000509092 MEGF8Q7Z7M0 2845 aa5.74□□□□□ -1.49
PDGFRA-207ENST00000509092 COL7A1Q02388 2944 aa5.74□□□□□ -1.49
PDGFRA-207ENST00000509092 IGKV2D-30A0A075B6S6 120 aa5.74□□□□□ -1.49
PDGFRA-207ENST00000509092 C14orf177Q52M58 125 aa5.74□□□□□ -1.49
PDGFRA-207ENST00000509092 Q6ZSA8 131 aa5.73□□□□□ -1.49
PDGFRA-207ENST00000509092 PANO1I0J062 215 aa5.71□□□□□ -1.5
PDGFRA-207ENST00000509092 STAB2Q8WWQ8 2551 aa5.71□□□□□ -1.5
PDGFRA-207ENST00000509092 PRKDCP78527 4128 aaKnown RBP5.7□□□□□ -1.5
PDGFRA-207ENST00000509092 DNAH9Q9NYC9 4486 aa5.69□□□□□ -1.5
PDGFRA-207ENST00000509092 HUWE1Q7Z6Z7 4374 aaKnown RBP5.69□□□□□ -1.5
PDGFRA-207ENST00000509092 KRTAP1-5Q9BYS1 174 aa5.68□□□□□ -1.5
PDGFRA-207ENST00000509092 KRTAP16-1A8MUX0 517 aa5.67□□□□□ -1.5
PDGFRA-207ENST00000509092 SPINK1P00995 79 aa5.67□□□□□ -1.5
PDGFRA-207ENST00000509092 ANAPC11Q9NYG5 84 aa5.67□□□□□ -1.5
PDGFRA-207ENST00000509092 DNAH10Q8IVF4 4471 aa5.67□□□□□ -1.5
PDGFRA-207ENST00000509092 A0A0A0MQY5 61 aa5.66□□□□□ -1.5
PDGFRA-207ENST00000509092 CRIPTQ9P021 101 aa5.66□□□□□ -1.5
PDGFRA-207ENST00000509092 FBN3Q75N90 2809 aa5.66□□□□□ -1.5
PDGFRA-207ENST00000509092 LYSTQ99698 3801 aa5.66□□□□□ -1.5
PDGFRA-207ENST00000509092 PSORS1C2Q9UIG4 136 aa5.65□□□□□ -1.5
PDGFRA-207ENST00000509092 A0A1B0GU33 70 aa5.65□□□□□ -1.51
PDGFRA-207ENST00000509092 TGP01266 2768 aa5.64□□□□□ -1.51
PDGFRA-207ENST00000509092 SSBP3-AS1Q7Z2R9 100 aa5.64□□□□□ -1.51
PDGFRA-207ENST00000509092 NUPR2A6NF83 97 aa5.64□□□□□ -1.51
PDGFRA-207ENST00000509092 K7ERS5 55 aa5.63□□□□□ -1.51
PDGFRA-207ENST00000509092 SPINT4Q6UDR6 99 aa5.63□□□□□ -1.51
PDGFRA-207ENST00000509092 A0A087WTM6 91 aa5.62□□□□□ -1.51
PDGFRA-207ENST00000509092 H1FX-AS1Q4G0G2 97 aa5.62□□□□□ -1.51
PDGFRA-207ENST00000509092 CIRBP-AS1Q8TBR5 109 aa5.62□□□□□ -1.51
PDGFRA-207ENST00000509092 SPACA4Q8TDM5 124 aa5.62□□□□□ -1.51
PDGFRA-207ENST00000509092 C20orf166-AS1Q96NR2 134 aa5.62□□□□□ -1.51
PDGFRA-207ENST00000509092 NDUFAF8A1L188 74 aa5.6□□□□□ -1.51
PDGFRA-207ENST00000509092 TYMSOSQ8TAI1 123 aa5.6□□□□□ -1.51
PDGFRA-207ENST00000509092 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.59□□□□□ -1.51
PDGFRA-207ENST00000509092 FLG2Q5D862 2391 aaPredicted RBP5.58□□□□□ -1.52
PDGFRA-207ENST00000509092 Q8N1X5 172 aa5.58□□□□□ -1.52
PDGFRA-207ENST00000509092 KRTAP15-1Q3LI76 137 aa5.57□□□□□ -1.52
PDGFRA-207ENST00000509092 FRAS1Q86XX4 4008 aa5.57□□□□□ -1.52
PDGFRA-207ENST00000509092 DNAH7Q8WXX0 4024 aa5.54□□□□□ -1.52
PDGFRA-207ENST00000509092 DNAH8Q96JB1 4490 aa5.53□□□□□ -1.52
PDGFRA-207ENST00000509092 UBE2DNLQ8IWF7 75 aa5.53□□□□□ -1.52
PDGFRA-207ENST00000509092 TPRXLQ17RH7 258 aa5.52□□□□□ -1.53
PDGFRA-207ENST00000509092 DYNC2H1Q8NCM8 4307 aaKnown RBP5.49□□□□□ -1.53
PDGFRA-207ENST00000509092 LCE2AQ5TA79 106 aaPredicted RBP5.49□□□□□ -1.53
PDGFRA-207ENST00000509092 STARD9Q9P2P6 4700 aa5.49□□□□□ -1.53
PDGFRA-207ENST00000509092 PLECQ15149 4684 aaKnown RBP5.49□□□□□ -1.53
PDGFRA-207ENST00000509092 LCE2CQ5TA81 110 aa5.46□□□□□ -1.53
PDGFRA-207ENST00000509092 COX6B2Q6YFQ2 88 aa5.46□□□□□ -1.54
PDGFRA-207ENST00000509092 Q6ZRN7 208 aaPredicted RBP5.46□□□□□ -1.54
PDGFRA-207ENST00000509092 APLNQ9ULZ1 77 aa5.46□□□□□ -1.54
PDGFRA-207ENST00000509092 NBDYA0A0U1RRE5 68 aa5.42□□□□□ -1.54
PDGFRA-207ENST00000509092 RPL37P61927 97 aaKnown RBP5.42□□□□□ -1.54
PDGFRA-207ENST00000509092 C10orf95Q9H7T3 257 aa5.39□□□□□ -1.55
PDGFRA-207ENST00000509092 VPS13DQ5THJ4 4388 aa5.39□□□□□ -1.55
PDGFRA-207ENST00000509092 KRTAP13-2Q52LG2 175 aa5.38□□□□□ -1.55
PDGFRA-207ENST00000509092 KRTAP3-1Q9BYR8 98 aa5.38□□□□□ -1.55
PDGFRA-207ENST00000509092 DNAH17Q9UFH2 4485 aa5.38□□□□□ -1.55
PDGFRA-207ENST00000509092 HECTD4Q9Y4D8 3996 aa5.37□□□□□ -1.55
PDGFRA-207ENST00000509092 KMT2AQ03164 3969 aa5.37□□□□□ -1.55
PDGFRA-207ENST00000509092 LUZP6Q538Z0 58 aa5.34□□□□□ -1.56
PDGFRA-207ENST00000509092 LORP23490 312 aaPredicted RBP5.32□□□□□ -1.56
PDGFRA-207ENST00000509092 DNAH2Q9P225 4427 aa5.29□□□□□ -1.56
PDGFRA-207ENST00000509092 SACSQ9NZJ4 4579 aa5.28□□□□□ -1.56
PDGFRA-207ENST00000509092 DNAH6Q9C0G6 4158 aa5.28□□□□□ -1.56
PDGFRA-207ENST00000509092 A0A0D9SG42 100 aa5.28□□□□□ -1.56
PDGFRA-207ENST00000509092 KRTAP13-4Q3LI77 160 aa5.28□□□□□ -1.56
PDGFRA-207ENST00000509092 HYDINQ4G0P3 5121 aa5.27□□□□□ -1.57
PDGFRA-207ENST00000509092 KRTAP10-6P60371 365 aaPredicted RBP5.26□□□□□ -1.57
PDGFRA-207ENST00000509092 KMT2CQ8NEZ4 4911 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms