RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.35□□□□□ -1.71
CLCN3-206ENST00000507875 A0A1B0GVY2 172 aa4.35□□□□□ -1.71
CLCN3-206ENST00000507875 Q6ZQT0 140 aa4.35□□□□□ -1.71
CLCN3-206ENST00000507875 SPACA4Q8TDM5 124 aa4.35□□□□□ -1.71
CLCN3-206ENST00000507875 KRTAP4-12Q9BQ66 201 aa4.35□□□□□ -1.71
CLCN3-206ENST00000507875 DNAH10Q8IVF4 4471 aa4.34□□□□□ -1.71
CLCN3-206ENST00000507875 IGLV1-50A0A075B6I6 118 aa4.34□□□□□ -1.71
CLCN3-206ENST00000507875 LOC100996750A0A140TA64 210 aa4.34□□□□□ -1.71
CLCN3-206ENST00000507875 KRTAP4-6Q9BYQ5 205 aa4.34□□□□□ -1.71
CLCN3-206ENST00000507875 hDV103S1A0JD37 113 aa4.34□□□□□ -1.72
CLCN3-206ENST00000507875 CDC42SE1Q9NRR8 79 aa4.34□□□□□ -1.72
CLCN3-206ENST00000507875 LOC110117498A0A087WWA1 95 aa4.33□□□□□ -1.72
CLCN3-206ENST00000507875 A0A1B0GVX0 72 aa4.33□□□□□ -1.72
CLCN3-206ENST00000507875 SPRR1AP35321 89 aa4.33□□□□□ -1.72
CLCN3-206ENST00000507875 A0A1B0GW54 56 aa4.33□□□□□ -1.72
CLCN3-206ENST00000507875 Q6JHZ5 121 aa4.33□□□□□ -1.72
CLCN3-206ENST00000507875 PLAC8Q9NZF1 115 aa4.33□□□□□ -1.72
CLCN3-206ENST00000507875 HECTD4Q9Y4D8 3996 aa4.33□□□□□ -1.72
CLCN3-206ENST00000507875 K7ERS5 55 aa4.32□□□□□ -1.72
CLCN3-206ENST00000507875 PDE6GP18545 87 aa4.32□□□□□ -1.72
CLCN3-206ENST00000507875 IGKV2-24A0A0C4DH68 120 aa4.31□□□□□ -1.72
CLCN3-206ENST00000507875 IGKV3D-7A0A0C4DH55 119 aa4.31□□□□□ -1.72
CLCN3-206ENST00000507875 A0A1W2PNN7 141 aa4.31□□□□□ -1.72
CLCN3-206ENST00000507875 A8MUU9 505 aa4.31□□□□□ -1.72
CLCN3-206ENST00000507875 MIR22HGQ0VDD5 57 aa4.31□□□□□ -1.72
CLCN3-206ENST00000507875 CAMK2N1Q7Z7J9 78 aa4.31□□□□□ -1.72
CLCN3-206ENST00000507875 TRAV7A0A075B6U4 112 aa4.3□□□□□ -1.72
CLCN3-206ENST00000507875 Q6ZSA8 131 aa4.3□□□□□ -1.72
CLCN3-206ENST00000507875 UBL5Q9BZL1 73 aa4.3□□□□□ -1.72
CLCN3-206ENST00000507875 DNAH2Q9P225 4427 aa4.3□□□□□ -1.72
CLCN3-206ENST00000507875 TRBV7-4A0A0J9YYF1 115 aa4.3□□□□□ -1.72
CLCN3-206ENST00000507875 ETDCA0A1B0GVM5 59 aa4.3□□□□□ -1.72
CLCN3-206ENST00000507875 DNAH17Q9UFH2 4485 aa4.29□□□□□ -1.72
CLCN3-206ENST00000507875 ATP5EP2Q5VTU8 51 aa4.29□□□□□ -1.72
CLCN3-206ENST00000507875 ASB16-AS1Q495Z4 193 aa4.29□□□□□ -1.72
CLCN3-206ENST00000507875 Q6ZRX8 168 aa4.29□□□□□ -1.72
CLCN3-206ENST00000507875 FAT2Q9NYQ8 4349 aa4.28□□□□□ -1.72
CLCN3-206ENST00000507875 CSAG1Q6PB30 78 aa4.28□□□□□ -1.72
CLCN3-206ENST00000507875 CASC2Q6XLA1 102 aa4.28□□□□□ -1.72
CLCN3-206ENST00000507875 HERC2O95714 4834 aa4.28□□□□□ -1.72
CLCN3-206ENST00000507875 CYP4F30PQ9H0H9 118 aa4.28□□□□□ -1.72
CLCN3-206ENST00000507875 C20orf166-AS1Q96NR2 134 aa4.27□□□□□ -1.73
CLCN3-206ENST00000507875 Q9BRP9 147 aa4.27□□□□□ -1.73
CLCN3-206ENST00000507875 KIAA1109Q2LD37 5005 aa4.27□□□□□ -1.73
CLCN3-206ENST00000507875 BCE1O60756 84 aa4.27□□□□□ -1.73
CLCN3-206ENST00000507875 PKHD1P08F94 4074 aa4.26□□□□□ -1.73
CLCN3-206ENST00000507875 DEFB105AQ8NG35 78 aa4.26□□□□□ -1.73
CLCN3-206ENST00000507875 PKD1P98161 4303 aa4.25□□□□□ -1.73
CLCN3-206ENST00000507875 PANO1I0J062 215 aa4.25□□□□□ -1.73
CLCN3-206ENST00000507875 IGLV5-48A0A075B6I7 105 aa4.24□□□□□ -1.73
CLCN3-206ENST00000507875 KRTAP10-1P60331 282 aa4.24□□□□□ -1.73
CLCN3-206ENST00000507875 HAMPP81172 84 aa4.24□□□□□ -1.73
CLCN3-206ENST00000507875 ZNF861PO60384 105 aa4.23□□□□□ -1.73
CLCN3-206ENST00000507875 ST20-AS1Q8NBB2 130 aa4.23□□□□□ -1.73
CLCN3-206ENST00000507875 DNAH11Q96DT5 4516 aa4.23□□□□□ -1.73
CLCN3-206ENST00000507875 ERC2-IT1O76042 136 aa4.23□□□□□ -1.73
CLCN3-206ENST00000507875 KRTAP13-1Q8IUC0 172 aa4.23□□□□□ -1.73
CLCN3-206ENST00000507875 LIMD2Q9BT23 127 aa4.22□□□□□ -1.73
CLCN3-206ENST00000507875 DYNC1H1Q14204 4646 aaKnown RBP4.22□□□□□ -1.73
CLCN3-206ENST00000507875 SPRR1BP22528 89 aa4.22□□□□□ -1.73
CLCN3-206ENST00000507875 PCLOQ9Y6V0 5065 aa4.22□□□□□ -1.73
CLCN3-206ENST00000507875 BPY2O14599 106 aa4.21□□□□□ -1.73
CLCN3-206ENST00000507875 PRR15LQ9BU68 103 aa4.21□□□□□ -1.74
CLCN3-206ENST00000507875 PSORS1C2Q9UIG4 136 aa4.21□□□□□ -1.74
CLCN3-206ENST00000507875 RYR1P21817 5038 aa4.2□□□□□ -1.74
CLCN3-206ENST00000507875 KRTAP17-1Q9BYP8 105 aa4.2□□□□□ -1.74
CLCN3-206ENST00000507875 IGLV7-43P04211 117 aa4.2□□□□□ -1.74
CLCN3-206ENST00000507875 NREPQ16612 68 aa4.2□□□□□ -1.74
CLCN3-206ENST00000507875 C1orf137Q5JT78 98 aa4.2□□□□□ -1.74
CLCN3-206ENST00000507875 DNAH8Q96JB1 4490 aa4.19□□□□□ -1.74
CLCN3-206ENST00000507875 RPL37AP61513 92 aaKnown RBP4.19□□□□□ -1.74
CLCN3-206ENST00000507875 PRLHP81277 87 aa4.19□□□□□ -1.74
CLCN3-206ENST00000507875 KRTAP11-1Q8IUC1 163 aa4.19□□□□□ -1.74
CLCN3-206ENST00000507875 A0A1W2PNM2 257 aa4.19□□□□□ -1.74
CLCN3-206ENST00000507875 KRTAP4-8Q9BYQ9 185 aa4.19□□□□□ -1.74
CLCN3-206ENST00000507875 KRTAP9-2Q9BYQ4 174 aa4.18□□□□□ -1.74
CLCN3-206ENST00000507875 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
CLCN3-206ENST00000507875 LINC00483Q53H64 154 aa4.18□□□□□ -1.74
CLCN3-206ENST00000507875 SPRR4Q96PI1 79 aa4.18□□□□□ -1.74
CLCN3-206ENST00000507875 HIGD2AQ9BW72 106 aa4.18□□□□□ -1.74
CLCN3-206ENST00000507875 LRP1BQ9NZR2 4599 aa4.18□□□□□ -1.74
CLCN3-206ENST00000507875 TMEM254Q8TBM7 123 aa4.17□□□□□ -1.74
CLCN3-206ENST00000507875 DNAH5Q8TE73 4624 aa4.16□□□□□ -1.74
CLCN3-206ENST00000507875 KRTAP4-5Q9BYR2 181 aa4.16□□□□□ -1.74
CLCN3-206ENST00000507875 HSPG2P98160 4391 aa4.16□□□□□ -1.74
CLCN3-206ENST00000507875 IGKV4-1P06312 121 aa4.15□□□□□ -1.75
CLCN3-206ENST00000507875 Q5VSD8 79 aa4.15□□□□□ -1.75
CLCN3-206ENST00000507875 IGFL1Q6UW32 110 aa4.15□□□□□ -1.75
CLCN3-206ENST00000507875 SPINK6Q6UWN8 80 aa4.15□□□□□ -1.75
CLCN3-206ENST00000507875 Q8N9L7 120 aa4.14□□□□□ -1.75
CLCN3-206ENST00000507875 ABCA13Q86UQ4 5058 aa4.14□□□□□ -1.75
CLCN3-206ENST00000507875 LOC101927531A0A1B0GV80 90 aa4.14□□□□□ -1.75
CLCN3-206ENST00000507875 SRRM2Q9UQ35 2752 aaKnown RBP4.14□□□□□ -1.75
CLCN3-206ENST00000507875 APOBP04114 4563 aaKnown RBP4.13□□□□□ -1.75
CLCN3-206ENST00000507875 SMR3BP02814 79 aaPredicted RBP4.13□□□□□ -1.75
CLCN3-206ENST00000507875 A0A0G2JQZ4 141 aa4.12□□□□□ -1.75
CLCN3-206ENST00000507875 H3BPC8 53 aa4.12□□□□□ -1.75
CLCN3-206ENST00000507875 SSBP3-AS1Q7Z2R9 100 aa4.12□□□□□ -1.75
CLCN3-206ENST00000507875 DEFB116Q30KQ4 102 aa4.11□□□□□ -1.75
CLCN3-206ENST00000507875 DSCR10P59022 87 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms