RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 TRBV7-7A0A0K0K1E9 115 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 SPTY2D1-AS1A0A0U1RR47 76 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 CRYM-AS1A6NIL9 109 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 DEFB108AA8MXU0 73 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 F6UZH7 168 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 H3BQF6 201 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 H3BUA1 57 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 NDUFB1O75438 58 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 HMGN1P05114 100 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 ARMS2P0C7Q2 107 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 IGLC1P0CG04 106 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 AKAIN1P0CW23 69 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 SAA2P0DJI9 122 aaPredicted RBP-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 GNGT1P63211 74 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 HSD52Q0P140 79 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 Q0VG73 95 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 BVES-AS1Q5T3Y7 98 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 LINC01590Q5TEZ4 76 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 DEFB107AQ8IZN7 70 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 C6orf48Q9UBA6 75 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 ARL2-SNX15V9GYD0 113 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 CUX1P39880 1505 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 LRRC7Q96NW7 1537 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 PPLO60437 1756 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 LTN1O94822 1766 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 A2ML1A8K2U0 1454 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 MED14O60244 1454 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 ABCC10Q5T3U5 1492 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 MLH3Q9UHC1 1453 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 QSER1Q2KHR3 1735 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 CLIP1P30622 1438 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 UACAQ9BZF9 1416 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 TOPAZ1Q8N9V7 1692 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 LMO7Q8WWI1 1683 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 PIK3C2BO00750 1634 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 DEPDC5O75140 1603 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 TIAM1Q13009 1591 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 DIP2AQ14689 1571 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 ARFGEF2Q9Y6D5 1785 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 EHBP1L1Q8N3D4 1523 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 A0A087WXM4 84 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 UQCRHLA0A096LP55 91 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 A0A1B0GWA3 101 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 TMEM218A2RU14 115 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 NDUFA4O00483 81 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 PDCD5O14737 125 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 NDUFA1O15239 70 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 GYPAP02724 150 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 UQCRHP07919 91 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 COX6CP09669 75 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 IGLC2P0DOY2 106 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 IGLC3P0DOY3 106 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 SARNPP82979 210 aaKnown RBP-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 NREPQ16612 68 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 ALKAL2Q6UX46 152 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 COX14Q96I36 57 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 FAM167A-AS1Q96KT0 104 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 GAFA1Q96PS6 74 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 NMES1Q9C002 83 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 KCNQ1DNQ9H478 68 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 ITSN1Q15811 1721 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 DDX60Q8IY21 1712 aaKnown RBP-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 LRRIQ1Q96JM4 1722 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 CCDC141Q6ZP82 1450 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 LRRC9Q6ZRR7 1453 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 RAPGEF2Q9Y4G8 1499 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 SHPRHQ149N8 1683 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 HFM1A2PYH4 1435 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 RRBP1Q9P2E9 1410 aaKnown RBP-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 TARBP1Q13395 1621 aaKnown RBP-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 MADDQ8WXG6 1647 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 DNMBPQ6XZF7 1577 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 DIP2CQ9Y2E4 1556 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 EPRSP07814 1512 aaKnown RBP-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 ERICH3Q5RHP9 1530 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 A0A0G2JMZ2 1700 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 LRRC37AA6NMS7 1700 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 RGPD1P0DJD0 1748 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 RICTORQ6R327 1708 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 CLTCQ00610 1675 aaKnown RBP-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 ALS2Q96Q42 1657 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 RALGAPBQ86X10 1494 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 TRBV25-1A0A075B6N4 114 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 IQCF6A8MYZ5 107 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 ATP6V1G2-DDX39BF2Z307 99 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 H0Y9P7 68 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 H3BQ15 152 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 TRAPPC2P0DI81 140 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 TRAPPC2BP0DI82 140 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 SMIM13P0DJ93 91 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 RBP2P50120 134 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 GNG11P61952 73 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 PLGLAQ15195 96 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 TMEM167AQ8TBQ9 72 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 LINC00308Q8TCZ7 52 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 CGREF1Q99674 301 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 AP4S1Q9Y587 144 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 CCDC180Q9P1Z9 1646 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 ANKARQ7Z5J8 1434 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 SCAPERQ9BY12 1400 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms