RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 TRBV7-7A0A0K0K1E9 115 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 SPTY2D1-AS1A0A0U1RR47 76 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 CRYM-AS1A6NIL9 109 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 DEFB108AA8MXU0 73 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 F6UZH7 168 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 H3BQF6 201 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 H3BUA1 57 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 NDUFB1O75438 58 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 HMGN1P05114 100 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 ARMS2P0C7Q2 107 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 IGLC1P0CG04 106 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 AKAIN1P0CW23 69 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 SAA2P0DJI9 122 aaPredicted RBP-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 GNGT1P63211 74 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 HSD52Q0P140 79 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 Q0VG73 95 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 BVES-AS1Q5T3Y7 98 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 LINC01590Q5TEZ4 76 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 DEFB107AQ8IZN7 70 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 C6orf48Q9UBA6 75 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 ARL2-SNX15V9GYD0 113 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 CUX1P39880 1505 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 LRRC7Q96NW7 1537 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 PPLO60437 1756 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 LTN1O94822 1766 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 A2ML1A8K2U0 1454 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 MED14O60244 1454 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 ABCC10Q5T3U5 1492 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 MLH3Q9UHC1 1453 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 QSER1Q2KHR3 1735 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 CLIP1P30622 1438 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 UACAQ9BZF9 1416 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 TOPAZ1Q8N9V7 1692 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 LMO7Q8WWI1 1683 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 PIK3C2BO00750 1634 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 DEPDC5O75140 1603 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 TIAM1Q13009 1591 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 DIP2AQ14689 1571 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 ARFGEF2Q9Y6D5 1785 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 EHBP1L1Q8N3D4 1523 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 A0A087WXM4 84 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 UQCRHLA0A096LP55 91 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 A0A1B0GWA3 101 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 TMEM218A2RU14 115 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 NDUFA4O00483 81 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 PDCD5O14737 125 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 NDUFA1O15239 70 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 GYPAP02724 150 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 UQCRHP07919 91 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 COX6CP09669 75 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 IGLC2P0DOY2 106 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 IGLC3P0DOY3 106 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 SARNPP82979 210 aaKnown RBP-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 NREPQ16612 68 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 ALKAL2Q6UX46 152 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 COX14Q96I36 57 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 FAM167A-AS1Q96KT0 104 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 GAFA1Q96PS6 74 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 NMES1Q9C002 83 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 KCNQ1DNQ9H478 68 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 ITSN1Q15811 1721 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 DDX60Q8IY21 1712 aaKnown RBP-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 LRRIQ1Q96JM4 1722 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 CCDC141Q6ZP82 1450 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 LRRC9Q6ZRR7 1453 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 RAPGEF2Q9Y4G8 1499 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 SHPRHQ149N8 1683 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 HFM1A2PYH4 1435 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 RRBP1Q9P2E9 1410 aaKnown RBP-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 TARBP1Q13395 1621 aaKnown RBP-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 MADDQ8WXG6 1647 aa-0.31□□□□□ -2.46
HMGB1P29-201ENST00000505659 DNMBPQ6XZF7 1577 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 DIP2CQ9Y2E4 1556 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 EPRSP07814 1512 aaKnown RBP-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 ERICH3Q5RHP9 1530 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 A0A0G2JMZ2 1700 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 LRRC37AA6NMS7 1700 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 RGPD1P0DJD0 1748 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 RICTORQ6R327 1708 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 CLTCQ00610 1675 aaKnown RBP-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 ALS2Q96Q42 1657 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 RALGAPBQ86X10 1494 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 TRBV25-1A0A075B6N4 114 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 IQCF6A8MYZ5 107 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 ATP6V1G2-DDX39BF2Z307 99 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 H0Y9P7 68 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 H3BQ15 152 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 TRAPPC2P0DI81 140 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 TRAPPC2BP0DI82 140 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 SMIM13P0DJ93 91 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 RBP2P50120 134 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 GNG11P61952 73 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 PLGLAQ15195 96 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 TMEM167AQ8TBQ9 72 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 LINC00308Q8TCZ7 52 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 CGREF1Q99674 301 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 AP4S1Q9Y587 144 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 CCDC180Q9P1Z9 1646 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 ANKARQ7Z5J8 1434 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 SCAPERQ9BY12 1400 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms