RNA–Protein interactions for RNA: ENST00000504672.5

PDGFC-204, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-204ENST00000504672 SCGB1C2P0DMR2 95 aa4.71□□□□□ -1.66
PDGFC-204ENST00000504672 CD164Q04900 197 aa4.71□□□□□ -1.66
PDGFC-204ENST00000504672 NAA38Q9BRA0 125 aaKnown RBP4.71□□□□□ -1.66
PDGFC-204ENST00000504672 ORMDL1Q9P0S3 153 aa4.71□□□□□ -1.66
PDGFC-204ENST00000504672 LAMTOR3Q9UHA4 124 aa4.71□□□□□ -1.66
PDGFC-204ENST00000504672 DNAL4O96015 105 aa4.7□□□□□ -1.66
PDGFC-204ENST00000504672 Q5XG85 94 aa4.7□□□□□ -1.66
PDGFC-204ENST00000504672 OBSCN-AS1Q96MR7 158 aa4.7□□□□□ -1.66
PDGFC-204ENST00000504672 H3BT86 120 aa4.69□□□□□ -1.66
PDGFC-204ENST00000504672 Q6JHZ5 121 aa4.69□□□□□ -1.66
PDGFC-204ENST00000504672 LIMD2Q9BT23 127 aa4.69□□□□□ -1.66
PDGFC-204ENST00000504672 PRO0461Q9UI25 63 aa4.69□□□□□ -1.66
PDGFC-204ENST00000504672 K7EP34 96 aa4.68□□□□□ -1.66
PDGFC-204ENST00000504672 MT2AP02795 61 aa4.68□□□□□ -1.66
PDGFC-204ENST00000504672 NDUFV3P56181 108 aaKnown RBP4.68□□□□□ -1.66
PDGFC-204ENST00000504672 TRBV7-4A0A0J9YYF1 115 aa4.67□□□□□ -1.66
PDGFC-204ENST00000504672 BAALC-AS2P0C853 105 aa4.67□□□□□ -1.66
PDGFC-204ENST00000504672 DEFB105AQ8NG35 78 aa4.67□□□□□ -1.66
PDGFC-204ENST00000504672 SPCS1Q9Y6A9 102 aa4.67□□□□□ -1.66
PDGFC-204ENST00000504672 H3BMG7 143 aa4.66□□□□□ -1.66
PDGFC-204ENST00000504672 NEBP20929 6669 aa4.65□□□□□ -1.66
PDGFC-204ENST00000504672 C1orf195Q5TG92 126 aa4.65□□□□□ -1.67
PDGFC-204ENST00000504672 IGFL1Q6UW32 110 aa4.65□□□□□ -1.67
PDGFC-204ENST00000504672 A0A1B0GW54 56 aa4.64□□□□□ -1.67
PDGFC-204ENST00000504672 C9JAW5 83 aa4.64□□□□□ -1.67
PDGFC-204ENST00000504672 F8WEM9 126 aa4.64□□□□□ -1.67
PDGFC-204ENST00000504672 JMJD7-PLA2G4BH0Y9G9 81 aa4.64□□□□□ -1.67
PDGFC-204ENST00000504672 MT1FP04733 61 aa4.64□□□□□ -1.67
PDGFC-204ENST00000504672 GTF2H5Q6ZYL4 71 aa4.64□□□□□ -1.67
PDGFC-204ENST00000504672 ANKRD29Q8N6D5 301 aa4.64□□□□□ -1.67
PDGFC-204ENST00000504672 LOC110117498A0A087WWA1 95 aa4.63□□□□□ -1.67
PDGFC-204ENST00000504672 A0A0G2JQZ4 141 aa4.63□□□□□ -1.67
PDGFC-204ENST00000504672 KRTAP6-3Q3LI67 103 aa4.63□□□□□ -1.67
PDGFC-204ENST00000504672 F8W1H4 67 aa4.62□□□□□ -1.67
PDGFC-204ENST00000504672 PDE6GP18545 87 aa4.62□□□□□ -1.67
PDGFC-204ENST00000504672 KRTAP10-10P60014 251 aa4.62□□□□□ -1.67
PDGFC-204ENST00000504672 RBM3P98179 157 aaKnown RBP4.62□□□□□ -1.67
PDGFC-204ENST00000504672 TEN1Q86WV5 123 aa4.62□□□□□ -1.67
PDGFC-204ENST00000504672 TRBV7-7A0A0K0K1E9 115 aa4.61□□□□□ -1.67
PDGFC-204ENST00000504672 A0A1W2PNM2 257 aa4.61□□□□□ -1.67
PDGFC-204ENST00000504672 Q6ZQT0 140 aa4.6□□□□□ -1.67
PDGFC-204ENST00000504672 ATP11AUNQ6ZP68 121 aa4.59□□□□□ -1.67
PDGFC-204ENST00000504672 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
PDGFC-204ENST00000504672 LINC00846Q9NV44 126 aa4.58□□□□□ -1.68
PDGFC-204ENST00000504672 DSCR8Q96T75 97 aa4.57□□□□□ -1.68
PDGFC-204ENST00000504672 A0A1B0GV90 55 aa4.56□□□□□ -1.68
PDGFC-204ENST00000504672 MTURNQ8N3F0 131 aa4.56□□□□□ -1.68
PDGFC-204ENST00000504672 SS18L2Q9UHA2 77 aa4.56□□□□□ -1.68
PDGFC-204ENST00000504672 CCKP06307 115 aa4.55□□□□□ -1.68
PDGFC-204ENST00000504672 Q96NJ1 140 aa4.55□□□□□ -1.68
PDGFC-204ENST00000504672 MUC12Q9UKN1 5478 aa4.55□□□□□ -1.68
PDGFC-204ENST00000504672 LINC00472Q9H8W2 130 aa4.54□□□□□ -1.68
PDGFC-204ENST00000504672 C14orf132Q9NPU4 83 aa4.54□□□□□ -1.68
PDGFC-204ENST00000504672 A0A087WSZ3 146 aa4.53□□□□□ -1.68
PDGFC-204ENST00000504672 ETDBQ3ZM63 59 aa4.52□□□□□ -1.69
PDGFC-204ENST00000504672 Q75L30 129 aa4.51□□□□□ -1.69
PDGFC-204ENST00000504672 KRTAP20-1Q3LI63 56 aa4.5□□□□□ -1.69
PDGFC-204ENST00000504672 FAM236DA0A1B0GTK5 79 aa4.49□□□□□ -1.69
PDGFC-204ENST00000504672 FAM240AA0A1B0GVK7 77 aa4.49□□□□□ -1.69
PDGFC-204ENST00000504672 FAM236CP0DP71 79 aa4.49□□□□□ -1.69
PDGFC-204ENST00000504672 C20orf166-AS1Q96NR2 134 aa4.49□□□□□ -1.69
PDGFC-204ENST00000504672 A0A1B0GV72 72 aa4.48□□□□□ -1.69
PDGFC-204ENST00000504672 J3KT08 172 aa4.47□□□□□ -1.69
PDGFC-204ENST00000504672 ACYP1P07311 99 aa4.46□□□□□ -1.7
PDGFC-204ENST00000504672 VPS25Q9BRG1 176 aa4.44□□□□□ -1.7
PDGFC-204ENST00000504672 NREPQ16612 68 aa4.43□□□□□ -1.7
PDGFC-204ENST00000504672 Q6ZVQ6 151 aa4.43□□□□□ -1.7
PDGFC-204ENST00000504672 KRTAP16-1A8MUX0 517 aa4.42□□□□□ -1.7
PDGFC-204ENST00000504672 DSCR10P59022 87 aa4.42□□□□□ -1.7
PDGFC-204ENST00000504672 KRTAP3-1Q9BYR8 98 aa4.42□□□□□ -1.7
PDGFC-204ENST00000504672 A0A1B0GVX0 72 aa4.41□□□□□ -1.7
PDGFC-204ENST00000504672 A8MWP4 228 aa4.41□□□□□ -1.7
PDGFC-204ENST00000504672 IGKV4-1P06312 121 aa4.41□□□□□ -1.7
PDGFC-204ENST00000504672 A8MUU9 505 aa4.4□□□□□ -1.71
PDGFC-204ENST00000504672 C8orf87E5RJ46 101 aa4.4□□□□□ -1.71
PDGFC-204ENST00000504672 PRR15Q8IV56 129 aa4.4□□□□□ -1.71
PDGFC-204ENST00000504672 SIGMAR1Q99720 223 aa4.4□□□□□ -1.71
PDGFC-204ENST00000504672 UBL5Q9BZL1 73 aa4.4□□□□□ -1.71
PDGFC-204ENST00000504672 MDN1Q9NU22 5596 aa4.4□□□□□ -1.71
PDGFC-204ENST00000504672 IGKV3D-7A0A0C4DH55 119 aa4.39□□□□□ -1.71
PDGFC-204ENST00000504672 CXCL6P80162 114 aa4.39□□□□□ -1.71
PDGFC-204ENST00000504672 MPLKIPQ8TAP9 179 aa4.39□□□□□ -1.71
PDGFC-204ENST00000504672 Q8N9P0 234 aaPredicted RBP4.38□□□□□ -1.71
PDGFC-204ENST00000504672 J3QR89 54 aa4.37□□□□□ -1.71
PDGFC-204ENST00000504672 BPY2O14599 106 aa4.37□□□□□ -1.71
PDGFC-204ENST00000504672 HRES1P13985 223 aa4.37□□□□□ -1.71
PDGFC-204ENST00000504672 DEFB116Q30KQ4 102 aa4.37□□□□□ -1.71
PDGFC-204ENST00000504672 NOTCH2NLQ7Z3S9 236 aa4.37□□□□□ -1.71
PDGFC-204ENST00000504672 RBM12B-AS1Q9P1G2 102 aa4.37□□□□□ -1.71
PDGFC-204ENST00000504672 NDUFB1O75438 58 aa4.36□□□□□ -1.71
PDGFC-204ENST00000504672 LINC00313P59037 77 aa4.36□□□□□ -1.71
PDGFC-204ENST00000504672 ATP5EP2Q5VTU8 51 aa4.36□□□□□ -1.71
PDGFC-204ENST00000504672 KMT2DO14686 5537 aa4.35□□□□□ -1.71
PDGFC-204ENST00000504672 MMP24-AS1A0A0U1RRL7 71 aa4.35□□□□□ -1.71
PDGFC-204ENST00000504672 K7EQZ3 153 aa4.35□□□□□ -1.71
PDGFC-204ENST00000504672 LINC00643Q86TS7 51 aa4.35□□□□□ -1.71
PDGFC-204ENST00000504672 C8orf17Q9NRJ1 99 aa4.35□□□□□ -1.71
PDGFC-204ENST00000504672 IGHV6-1A0A0B4J1U7 121 aa4.33□□□□□ -1.72
PDGFC-204ENST00000504672 K7ERU9 68 aa4.33□□□□□ -1.72
PDGFC-204ENST00000504672 TMEM254Q8TBM7 123 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms