RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 KRTAP11-1Q8IUC1 163 aa5.36□□□□□ -1.55
CASC9-201ENST00000504531 CSMD3Q7Z407 3707 aa5.36□□□□□ -1.55
CASC9-201ENST00000504531 STARD9Q9P2P6 4700 aa5.35□□□□□ -1.55
CASC9-201ENST00000504531 hDV103S1A0JD37 113 aa5.35□□□□□ -1.55
CASC9-201ENST00000504531 CHTF8P0CG12 524 aa5.35□□□□□ -1.55
CASC9-201ENST00000504531 SPANXA2-OT1Q8N9U9 137 aa5.35□□□□□ -1.55
CASC9-201ENST00000504531 PLAC8Q9NZF1 115 aa5.35□□□□□ -1.55
CASC9-201ENST00000504531 ASB16-AS1Q495Z4 193 aa5.34□□□□□ -1.55
CASC9-201ENST00000504531 TP53AIP1Q9HCN2 124 aa5.34□□□□□ -1.55
CASC9-201ENST00000504531 CASC2Q6XLA1 102 aa5.33□□□□□ -1.56
CASC9-201ENST00000504531 IGLV5-52A0A0A0MRZ9 124 aa5.32□□□□□ -1.56
CASC9-201ENST00000504531 VPS13DQ5THJ4 4388 aa5.32□□□□□ -1.56
CASC9-201ENST00000504531 ZNF861PO60384 105 aa5.31□□□□□ -1.56
CASC9-201ENST00000504531 CD164Q04900 197 aa5.31□□□□□ -1.56
CASC9-201ENST00000504531 MOBPQ13875 183 aa5.31□□□□□ -1.56
CASC9-201ENST00000504531 FP248Q71RG6 208 aaPredicted RBP5.31□□□□□ -1.56
CASC9-201ENST00000504531 TRAV22A0A0B4J277 110 aa5.3□□□□□ -1.56
CASC9-201ENST00000504531 PANO1I0J062 215 aa5.3□□□□□ -1.56
CASC9-201ENST00000504531 RTL8CO15255 209 aa5.3□□□□□ -1.56
CASC9-201ENST00000504531 C4orf26Q17RF5 130 aa5.3□□□□□ -1.56
CASC9-201ENST00000504531 HERC2O95714 4834 aa5.3□□□□□ -1.56
CASC9-201ENST00000504531 PCLOQ9Y6V0 5065 aa5.29□□□□□ -1.56
CASC9-201ENST00000504531 MMP24-AS1A0A0U1RRL7 71 aa5.28□□□□□ -1.56
CASC9-201ENST00000504531 Q96NJ1 140 aa5.28□□□□□ -1.56
CASC9-201ENST00000504531 PLECQ15149 4684 aaKnown RBP5.27□□□□□ -1.57
CASC9-201ENST00000504531 Q1T7F1 81 aa5.27□□□□□ -1.57
CASC9-201ENST00000504531 C1orf134Q5TEV5 83 aa5.27□□□□□ -1.57
CASC9-201ENST00000504531 SSBP3-AS1Q7Z2R9 100 aa5.27□□□□□ -1.57
CASC9-201ENST00000504531 WFDC13Q8IUB5 93 aa5.27□□□□□ -1.57
CASC9-201ENST00000504531 PSORS1C2Q9UIG4 136 aa5.27□□□□□ -1.57
CASC9-201ENST00000504531 V9GYY9 64 aa5.27□□□□□ -1.57
CASC9-201ENST00000504531 DNAH10Q8IVF4 4471 aa5.26□□□□□ -1.57
CASC9-201ENST00000504531 A0A0G2JQZ4 141 aa5.26□□□□□ -1.57
CASC9-201ENST00000504531 H0Y9P7 68 aa5.26□□□□□ -1.57
CASC9-201ENST00000504531 DEFB116Q30KQ4 102 aa5.25□□□□□ -1.57
CASC9-201ENST00000504531 HRCT1Q6UXD1 115 aa5.25□□□□□ -1.57
CASC9-201ENST00000504531 C1orf64Q8NEQ6 169 aa5.25□□□□□ -1.57
CASC9-201ENST00000504531 ALMS1Q8TCU4 4167 aa5.24□□□□□ -1.57
CASC9-201ENST00000504531 LINC00208Q96KT6 92 aa5.24□□□□□ -1.57
CASC9-201ENST00000504531 C8orf17Q9NRJ1 99 aa5.24□□□□□ -1.57
CASC9-201ENST00000504531 RYR1P21817 5038 aa5.23□□□□□ -1.57
CASC9-201ENST00000504531 A0A1B0GVX0 72 aa5.23□□□□□ -1.57
CASC9-201ENST00000504531 IGLV7-43P04211 117 aa5.23□□□□□ -1.57
CASC9-201ENST00000504531 C1orf195Q5TG92 126 aa5.23□□□□□ -1.57
CASC9-201ENST00000504531 PRO0628Q9UI54 55 aa5.23□□□□□ -1.57
CASC9-201ENST00000504531 FRAS1Q86XX4 4008 aa5.23□□□□□ -1.57
CASC9-201ENST00000504531 DNAH17Q9UFH2 4485 aa5.22□□□□□ -1.57
CASC9-201ENST00000504531 IGLV7-46A0A075B6I9 117 aa5.22□□□□□ -1.57
CASC9-201ENST00000504531 CDK2AP2O75956 126 aa5.22□□□□□ -1.57
CASC9-201ENST00000504531 IGLV9-49A0A0B4J1Y8 123 aa5.21□□□□□ -1.58
CASC9-201ENST00000504531 LINC00336Q6ZUF6 198 aa5.21□□□□□ -1.58
CASC9-201ENST00000504531 DNAH6Q9C0G6 4158 aa5.2□□□□□ -1.58
CASC9-201ENST00000504531 C8orf87E5RJ46 101 aa5.2□□□□□ -1.58
CASC9-201ENST00000504531 FAM229BQ4G0N7 80 aa5.2□□□□□ -1.58
CASC9-201ENST00000504531 MRPL34Q9BQ48 92 aaKnown RBP5.2□□□□□ -1.58
CASC9-201ENST00000504531 KMT2AQ03164 3969 aa5.18□□□□□ -1.58
CASC9-201ENST00000504531 Q6ZSA8 131 aa5.18□□□□□ -1.58
CASC9-201ENST00000504531 KIAA1109Q2LD37 5005 aa5.18□□□□□ -1.58
CASC9-201ENST00000504531 LIMD2Q9BT23 127 aa5.17□□□□□ -1.58
CASC9-201ENST00000504531 HECTD4Q9Y4D8 3996 aa5.17□□□□□ -1.58
CASC9-201ENST00000504531 DNAH2Q9P225 4427 aa5.17□□□□□ -1.58
CASC9-201ENST00000504531 LOC101927531A0A1B0GV80 90 aa5.16□□□□□ -1.58
CASC9-201ENST00000504531 KRTAP2-2Q9BYT5 123 aa5.14□□□□□ -1.59
CASC9-201ENST00000504531 IGHV6-1A0A0B4J1U7 121 aa5.13□□□□□ -1.59
CASC9-201ENST00000504531 MT3P25713 68 aa5.13□□□□□ -1.59
CASC9-201ENST00000504531 A0A1B0GVY2 172 aa5.12□□□□□ -1.59
CASC9-201ENST00000504531 CIRBP-AS1Q8TBR5 109 aa5.12□□□□□ -1.59
CASC9-201ENST00000504531 KRTAP13-3Q3SY46 172 aa5.11□□□□□ -1.59
CASC9-201ENST00000504531 DNAH8Q96JB1 4490 aa5.11□□□□□ -1.59
CASC9-201ENST00000504531 SRRM2Q9UQ35 2752 aaKnown RBP5.09□□□□□ -1.59
CASC9-201ENST00000504531 ABCA13Q86UQ4 5058 aa5.09□□□□□ -1.59
CASC9-201ENST00000504531 RPS29P62273 56 aaKnown RBP5.08□□□□□ -1.6
CASC9-201ENST00000504531 COA5Q86WW8 74 aa5.08□□□□□ -1.6
CASC9-201ENST00000504531 ANAPC11Q9NYG5 84 aa5.08□□□□□ -1.6
CASC9-201ENST00000504531 NDUFS5O43920 106 aa5.07□□□□□ -1.6
CASC9-201ENST00000504531 LINC00313P59037 77 aa5.07□□□□□ -1.6
CASC9-201ENST00000504531 SEC61BP60468 96 aaKnown RBP5.07□□□□□ -1.6
CASC9-201ENST00000504531 PRR4Q16378 134 aa5.06□□□□□ -1.6
CASC9-201ENST00000504531 BRK1Q8WUW1 75 aa5.06□□□□□ -1.6
CASC9-201ENST00000504531 LINC01558Q9Y6Z2 57 aa5.06□□□□□ -1.6
CASC9-201ENST00000504531 A0A087X002 238 aa5.05□□□□□ -1.6
CASC9-201ENST00000504531 NOTCH2NLQ7Z3S9 236 aa5.05□□□□□ -1.6
CASC9-201ENST00000504531 SPINK1P00995 79 aa5.04□□□□□ -1.6
CASC9-201ENST00000504531 KRTAP13-2Q52LG2 175 aa5.04□□□□□ -1.6
CASC9-201ENST00000504531 Q5VV11 94 aa5.04□□□□□ -1.6
CASC9-201ENST00000504531 Q75L30 129 aa5.04□□□□□ -1.6
CASC9-201ENST00000504531 KRTAP1-4P0C5Y4 121 aa5.03□□□□□ -1.6
CASC9-201ENST00000504531 ACYP2P14621 99 aa5.03□□□□□ -1.6
CASC9-201ENST00000504531 KRTAP10-1P60331 282 aa5.03□□□□□ -1.6
CASC9-201ENST00000504531 SPAG11AQ6PDA7 123 aa5.03□□□□□ -1.6
CASC9-201ENST00000504531 PCOTHQ58A44 107 aa5.02□□□□□ -1.61
CASC9-201ENST00000504531 SPINK6Q6UWN8 80 aa5.02□□□□□ -1.61
CASC9-201ENST00000504531 PKHD1P08F94 4074 aa5.02□□□□□ -1.61
CASC9-201ENST00000504531 DNAH11Q96DT5 4516 aa5.01□□□□□ -1.61
CASC9-201ENST00000504531 A8MUN3 132 aa5.01□□□□□ -1.61
CASC9-201ENST00000504531 HRES1P13985 223 aa5.01□□□□□ -1.61
CASC9-201ENST00000504531 Q5W150 140 aa5.01□□□□□ -1.61
CASC9-201ENST00000504531 DYNC1H1Q14204 4646 aaKnown RBP5□□□□□ -1.61
CASC9-201ENST00000504531 KRTAP16-1A8MUX0 517 aa5□□□□□ -1.61
CASC9-201ENST00000504531 DMAC1Q96GE9 116 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms