RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 TRAV21A0A0B4J279 112 aa-0.87□□□□□ -2.55
CDC42SE2-204ENST00000502639 CYB5AP00167 134 aa-0.87□□□□□ -2.55
CDC42SE2-204ENST00000502639 MT1HL1P0DM35 61 aa-0.87□□□□□ -2.55
CDC42SE2-204ENST00000502639 WFDC9Q8NEX5 89 aa-0.87□□□□□ -2.55
CDC42SE2-204ENST00000502639 CDC42BPAQ5VT25 1732 aa-0.87□□□□□ -2.55
CDC42SE2-204ENST00000502639 EPRSP07814 1512 aaKnown RBP-0.88□□□□□ -2.55
CDC42SE2-204ENST00000502639 VPS13CQ709C8 3753 aa-0.88□□□□□ -2.55
CDC42SE2-204ENST00000502639 DDX60LQ5H9U9 1706 aaKnown RBP-0.88□□□□□ -2.55
CDC42SE2-204ENST00000502639 PARP4Q9UKK3 1724 aaKnown RBP-0.88□□□□□ -2.55
CDC42SE2-204ENST00000502639 LYNX1G3V0Z9 82 aa-0.88□□□□□ -2.55
CDC42SE2-204ENST00000502639 HMGN2P05204 90 aaKnown RBP-0.88□□□□□ -2.55
CDC42SE2-204ENST00000502639 IFI6P09912 130 aa-0.88□□□□□ -2.55
CDC42SE2-204ENST00000502639 TOGARAM1Q9Y4F4 1720 aa-0.89□□□□□ -2.55
CDC42SE2-204ENST00000502639 MT1EP04732 61 aa-0.89□□□□□ -2.55
CDC42SE2-204ENST00000502639 PLIN4Q96Q06 1357 aa-0.89□□□□□ -2.55
CDC42SE2-204ENST00000502639 FANCAO15360 1455 aa-0.89□□□□□ -2.55
CDC42SE2-204ENST00000502639 ATP10BO94823 1461 aa-0.89□□□□□ -2.55
CDC42SE2-204ENST00000502639 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.89□□□□□ -2.55
CDC42SE2-204ENST00000502639 AKAP12Q02952 1782 aa-0.89□□□□□ -2.55
CDC42SE2-204ENST00000502639 MYO3AQ8NEV4 1616 aa-0.89□□□□□ -2.55
CDC42SE2-204ENST00000502639 ARFGEF2Q9Y6D5 1785 aa-0.9□□□□□ -2.55
CDC42SE2-204ENST00000502639 LCE6AA0A183 80 aa-0.9□□□□□ -2.55
CDC42SE2-204ENST00000502639 ACYP1P07311 99 aa-0.9□□□□□ -2.55
CDC42SE2-204ENST00000502639 TNP1P09430 55 aa-0.9□□□□□ -2.55
CDC42SE2-204ENST00000502639 SMIM11AP58511 58 aa-0.9□□□□□ -2.55
CDC42SE2-204ENST00000502639 PEA15Q15121 130 aa-0.9□□□□□ -2.55
CDC42SE2-204ENST00000502639 ITSN1Q15811 1721 aa-0.91□□□□□ -2.55
CDC42SE2-204ENST00000502639 MT1GP13640 62 aa-0.91□□□□□ -2.56
CDC42SE2-204ENST00000502639 KRTAP8-1Q8IUC2 63 aa-0.91□□□□□ -2.56
CDC42SE2-204ENST00000502639 MT1LQ93083 61 aa-0.91□□□□□ -2.56
CDC42SE2-204ENST00000502639 PLCH1Q4KWH8 1693 aa-0.91□□□□□ -2.56
CDC42SE2-204ENST00000502639 VCANP13611 3396 aa-0.91□□□□□ -2.56
CDC42SE2-204ENST00000502639 DIP2BQ9P265 1576 aa-0.91□□□□□ -2.56
CDC42SE2-204ENST00000502639 TMEM131LA2VDJ0 1609 aa-0.92□□□□□ -2.56
CDC42SE2-204ENST00000502639 MMP24-AS1A0A0U1RRL7 71 aa-0.92□□□□□ -2.56
CDC42SE2-204ENST00000502639 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.92□□□□□ -2.56
CDC42SE2-204ENST00000502639 ITSN2Q9NZM3 1697 aa-0.92□□□□□ -2.56
CDC42SE2-204ENST00000502639 LY75O60449 1722 aa-0.92□□□□□ -2.56
CDC42SE2-204ENST00000502639 NCOA2Q15596 1464 aa-0.92□□□□□ -2.56
CDC42SE2-204ENST00000502639 MYMXA0A1B0GTQ4 84 aa-0.93□□□□□ -2.56
CDC42SE2-204ENST00000502639 NDUFB1O75438 58 aa-0.93□□□□□ -2.56
CDC42SE2-204ENST00000502639 PKIAP61925 76 aa-0.93□□□□□ -2.56
CDC42SE2-204ENST00000502639 TJP1Q07157 1748 aa-0.94□□□□□ -2.56
CDC42SE2-204ENST00000502639 CDC42BPGQ6DT37 1551 aa-0.94□□□□□ -2.56
CDC42SE2-204ENST00000502639 VPS8Q8N3P4 1428 aa-0.94□□□□□ -2.56
CDC42SE2-204ENST00000502639 IGLV5-48A0A075B6I7 105 aa-0.94□□□□□ -2.56
CDC42SE2-204ENST00000502639 WDFY3Q8IZQ1 3526 aa-0.94□□□□□ -2.56
CDC42SE2-204ENST00000502639 KIF1AQ12756 1690 aa-0.94□□□□□ -2.56
CDC42SE2-204ENST00000502639 ZC3H13Q5T200 1668 aaKnown RBP-0.94□□□□□ -2.56
CDC42SE2-204ENST00000502639 KIAA0586Q9BVV6 1533 aa-0.94□□□□□ -2.56
CDC42SE2-204ENST00000502639 CEP250Q9BV73 2442 aa-0.95□□□□□ -2.56
CDC42SE2-204ENST00000502639 NDUFA4O00483 81 aa-0.95□□□□□ -2.56
CDC42SE2-204ENST00000502639 GYPAP02724 150 aa-0.95□□□□□ -2.56
CDC42SE2-204ENST00000502639 MT1BP07438 61 aa-0.95□□□□□ -2.56
CDC42SE2-204ENST00000502639 IFI27P40305 119 aaPredicted RBP-0.95□□□□□ -2.56
CDC42SE2-204ENST00000502639 WT1-ASQ06250 92 aa-0.95□□□□□ -2.56
CDC42SE2-204ENST00000502639 URB2Q14146 1524 aaKnown RBP-0.95□□□□□ -2.56
CDC42SE2-204ENST00000502639 RICTORQ6R327 1708 aa-0.95□□□□□ -2.56
CDC42SE2-204ENST00000502639 CCNB3Q8WWL7 1395 aa-0.96□□□□□ -2.56
CDC42SE2-204ENST00000502639 FRYLO94915 3013 aa-0.96□□□□□ -2.56
CDC42SE2-204ENST00000502639 PIK3C2BO00750 1634 aa-0.96□□□□□ -2.56
CDC42SE2-204ENST00000502639 CEP162Q5TB80 1403 aa-0.96□□□□□ -2.56
CDC42SE2-204ENST00000502639 CDH23Q9H251 3354 aa-0.96□□□□□ -2.56
CDC42SE2-204ENST00000502639 UMAD1C9J7I0 102 aa-0.96□□□□□ -2.56
CDC42SE2-204ENST00000502639 MT1MQ8N339 61 aa-0.96□□□□□ -2.56
CDC42SE2-204ENST00000502639 THOC2Q8NI27 1593 aaKnown RBP-0.96□□□□□ -2.56
CDC42SE2-204ENST00000502639 CFAP43Q8NDM7 1665 aa-0.97□□□□□ -2.56
CDC42SE2-204ENST00000502639 NRAPQ86VF7 1730 aa-0.97□□□□□ -2.56
CDC42SE2-204ENST00000502639 CEBPZOSA8MTT3 80 aa-0.97□□□□□ -2.56
CDC42SE2-204ENST00000502639 MT2AP02795 61 aa-0.97□□□□□ -2.56
CDC42SE2-204ENST00000502639 S100A8P05109 93 aa-0.97□□□□□ -2.56
CDC42SE2-204ENST00000502639 RABAC1Q9UI14 185 aa-0.97□□□□□ -2.56
CDC42SE2-204ENST00000502639 LRRIQ1Q96JM4 1722 aa-0.98□□□□□ -2.57
CDC42SE2-204ENST00000502639 CCDC88BA6NC98 1476 aa-0.98□□□□□ -2.57
CDC42SE2-204ENST00000502639 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.98□□□□□ -2.57
CDC42SE2-204ENST00000502639 DMDP11532 3685 aa-0.98□□□□□ -2.57
CDC42SE2-204ENST00000502639 MAST1Q9Y2H9 1570 aa-0.98□□□□□ -2.57
CDC42SE2-204ENST00000502639 RPS27P42677 84 aaKnown RBP-0.98□□□□□ -2.57
CDC42SE2-204ENST00000502639 RPS27LQ71UM5 84 aaKnown RBP-0.98□□□□□ -2.57
CDC42SE2-204ENST00000502639 LINC00643Q86TS7 51 aa-0.98□□□□□ -2.57
CDC42SE2-204ENST00000502639 RNF17Q9BXT8 1623 aaKnown RBP-0.99□□□□□ -2.57
CDC42SE2-204ENST00000502639 DEFB131BA0A096LNP1 70 aa-0.99□□□□□ -2.57
CDC42SE2-204ENST00000502639 SNRPFP62306 86 aaKnown RBP-0.99□□□□□ -2.57
CDC42SE2-204ENST00000502639 NREPQ16612 68 aa-0.99□□□□□ -2.57
CDC42SE2-204ENST00000502639 PPLO60437 1756 aa-0.99□□□□□ -2.57
CDC42SE2-204ENST00000502639 A0A1B0GUL6 1792 aa-1□□□□□ -2.57
CDC42SE2-204ENST00000502639 DNAH12Q6ZR08 3092 aa-1□□□□□ -2.57
CDC42SE2-204ENST00000502639 MRPL33O75394 65 aaKnown RBP-1□□□□□ -2.57
CDC42SE2-204ENST00000502639 MINOS1Q5TGZ0 78 aa-1□□□□□ -2.57
CDC42SE2-204ENST00000502639 NOP10Q9NPE3 64 aaKnown RBP-1□□□□□ -2.57
CDC42SE2-204ENST00000502639 KIF14Q15058 1648 aa-1□□□□□ -2.57
CDC42SE2-204ENST00000502639 LINC01546A6NGU7 62 aa-1.01□□□□□ -2.57
CDC42SE2-204ENST00000502639 SFTA3P0C7M3 94 aa-1.01□□□□□ -2.57
CDC42SE2-204ENST00000502639 CRIP1P50238 77 aa-1.01□□□□□ -2.57
CDC42SE2-204ENST00000502639 BVES-AS1Q5T3Y7 98 aa-1.01□□□□□ -2.57
CDC42SE2-204ENST00000502639 NCBP2-AS2Q69YL0 99 aa-1.01□□□□□ -2.57
CDC42SE2-204ENST00000502639 HFM1A2PYH4 1435 aa-1.01□□□□□ -2.57
CDC42SE2-204ENST00000502639 ARHGAP35Q9NRY4 1499 aa-1.01□□□□□ -2.57
CDC42SE2-204ENST00000502639 INO80Q9ULG1 1556 aaPredicted RBP-1.01□□□□□ -2.57
CDC42SE2-204ENST00000502639 H3BUA1 57 aa-1.02□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms