RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 BAALC-AS2P0C853 105 aa3.64□□□□□ -1.83
VIM-207ENST00000495528 KRTAP13-2Q52LG2 175 aa3.64□□□□□ -1.83
VIM-207ENST00000495528 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.64□□□□□ -1.83
VIM-207ENST00000495528 SPRR4Q96PI1 79 aa3.64□□□□□ -1.83
VIM-207ENST00000495528 TEX49A0A1B0GTD5 131 aa3.63□□□□□ -1.83
VIM-207ENST00000495528 A0A1B0GV90 55 aa3.63□□□□□ -1.83
VIM-207ENST00000495528 C9JAW5 83 aa3.63□□□□□ -1.83
VIM-207ENST00000495528 TPRXLQ17RH7 258 aa3.62□□□□□ -1.83
VIM-207ENST00000495528 GTF2H5Q6ZYL4 71 aa3.62□□□□□ -1.83
VIM-207ENST00000495528 ORMDL1Q9P0S3 153 aa3.62□□□□□ -1.83
VIM-207ENST00000495528 ZNF706Q9Y5V0 76 aaPredicted RBP3.62□□□□□ -1.83
VIM-207ENST00000495528 IGLV5-48A0A075B6I7 105 aa3.61□□□□□ -1.83
VIM-207ENST00000495528 K7EP34 96 aa3.61□□□□□ -1.83
VIM-207ENST00000495528 OCIAD2Q56VL3 154 aa3.61□□□□□ -1.83
VIM-207ENST00000495528 C3orf22Q8N5N4 141 aa3.61□□□□□ -1.83
VIM-207ENST00000495528 LINC00304Q8N9R0 145 aa3.61□□□□□ -1.83
VIM-207ENST00000495528 LAMTOR3Q9UHA4 124 aa3.61□□□□□ -1.83
VIM-207ENST00000495528 TMEM256-PLSCR3K7ERE1 68 aa3.6□□□□□ -1.83
VIM-207ENST00000495528 SPRR1BP22528 89 aa3.6□□□□□ -1.83
VIM-207ENST00000495528 LINC00483Q53H64 154 aa3.6□□□□□ -1.83
VIM-207ENST00000495528 A0A1B0GV72 72 aa3.59□□□□□ -1.83
VIM-207ENST00000495528 H3BQ85 93 aa3.59□□□□□ -1.83
VIM-207ENST00000495528 KRTAP13-3Q3SY46 172 aa3.59□□□□□ -1.83
VIM-207ENST00000495528 FAM229BQ4G0N7 80 aa3.59□□□□□ -1.83
VIM-207ENST00000495528 FSIP2Q5CZC0 6907 aa3.59□□□□□ -1.84
VIM-207ENST00000495528 C9orf153Q5TBE3 101 aa3.58□□□□□ -1.84
VIM-207ENST00000495528 ANKRD29Q8N6D5 301 aa3.58□□□□□ -1.84
VIM-207ENST00000495528 PPDPFLQ8WWR9 84 aa3.58□□□□□ -1.84
VIM-207ENST00000495528 CRCT1Q9UGL9 99 aa3.58□□□□□ -1.84
VIM-207ENST00000495528 A0A0G2JQZ4 141 aa3.57□□□□□ -1.84
VIM-207ENST00000495528 F8W1H4 67 aa3.57□□□□□ -1.84
VIM-207ENST00000495528 F8WEM9 126 aa3.57□□□□□ -1.84
VIM-207ENST00000495528 MOBPQ13875 183 aa3.57□□□□□ -1.84
VIM-207ENST00000495528 KRTAP4-1Q9BYQ7 146 aa3.57□□□□□ -1.84
VIM-207ENST00000495528 H3BT86 120 aa3.56□□□□□ -1.84
VIM-207ENST00000495528 RBM3P98179 157 aaKnown RBP3.56□□□□□ -1.84
VIM-207ENST00000495528 SSBP3-AS1Q7Z2R9 100 aa3.56□□□□□ -1.84
VIM-207ENST00000495528 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
VIM-207ENST00000495528 ASB16-AS1Q495Z4 193 aa3.55□□□□□ -1.84
VIM-207ENST00000495528 HRCT1Q6UXD1 115 aa3.55□□□□□ -1.84
VIM-207ENST00000495528 JMJD7-PLA2G4BH0Y9G9 81 aa3.54□□□□□ -1.84
VIM-207ENST00000495528 ETDBQ3ZM63 59 aa3.54□□□□□ -1.84
VIM-207ENST00000495528 SPAG11AQ6PDA7 123 aa3.54□□□□□ -1.84
VIM-207ENST00000495528 IGFL1Q6UW32 110 aa3.54□□□□□ -1.84
VIM-207ENST00000495528 Q8N9L7 120 aa3.54□□□□□ -1.84
VIM-207ENST00000495528 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
VIM-207ENST00000495528 Q6JHZ5 121 aa3.53□□□□□ -1.84
VIM-207ENST00000495528 FP248Q71RG6 208 aaPredicted RBP3.53□□□□□ -1.84
VIM-207ENST00000495528 DSCR8Q96T75 97 aa3.53□□□□□ -1.84
VIM-207ENST00000495528 VPS25Q9BRG1 176 aa3.53□□□□□ -1.84
VIM-207ENST00000495528 C14orf132Q9NPU4 83 aa3.53□□□□□ -1.84
VIM-207ENST00000495528 OBSCN-AS1Q96MR7 158 aa3.52□□□□□ -1.85
VIM-207ENST00000495528 TRBV7-4A0A0J9YYF1 115 aa3.51□□□□□ -1.85
VIM-207ENST00000495528 A0A1W2PNM2 257 aa3.51□□□□□ -1.85
VIM-207ENST00000495528 CCKP06307 115 aa3.51□□□□□ -1.85
VIM-207ENST00000495528 TEN1Q86WV5 123 aa3.51□□□□□ -1.85
VIM-207ENST00000495528 Q6ZQT0 140 aa3.5□□□□□ -1.85
VIM-207ENST00000495528 LOC110117498A0A087WWA1 95 aa3.49□□□□□ -1.85
VIM-207ENST00000495528 SPINK1P00995 79 aa3.49□□□□□ -1.85
VIM-207ENST00000495528 PDE6GP18545 87 aa3.49□□□□□ -1.85
VIM-207ENST00000495528 CD164Q04900 197 aa3.49□□□□□ -1.85
VIM-207ENST00000495528 TRBV7-7A0A0K0K1E9 115 aa3.48□□□□□ -1.85
VIM-207ENST00000495528 KRTAP19-2Q3LHN2 52 aa3.48□□□□□ -1.85
VIM-207ENST00000495528 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
VIM-207ENST00000495528 A0A087WSZ3 146 aa3.47□□□□□ -1.85
VIM-207ENST00000495528 Q6Q795 121 aa3.47□□□□□ -1.85
VIM-207ENST00000495528 MT1HP80294 61 aa3.46□□□□□ -1.86
VIM-207ENST00000495528 DEFB116Q30KQ4 102 aa3.45□□□□□ -1.86
VIM-207ENST00000495528 LIMD2Q9BT23 127 aa3.45□□□□□ -1.86
VIM-207ENST00000495528 A0A1B0GW54 56 aa3.44□□□□□ -1.86
VIM-207ENST00000495528 NREPQ16612 68 aa3.44□□□□□ -1.86
VIM-207ENST00000495528 C1orf195Q5TG92 126 aa3.44□□□□□ -1.86
VIM-207ENST00000495528 RPS29P62273 56 aaKnown RBP3.43□□□□□ -1.86
VIM-207ENST00000495528 Q5XG85 94 aa3.43□□□□□ -1.86
VIM-207ENST00000495528 LINC00846Q9NV44 126 aa3.43□□□□□ -1.86
VIM-207ENST00000495528 SS18L2Q9UHA2 77 aa3.43□□□□□ -1.86
VIM-207ENST00000495528 J3QR89 54 aa3.42□□□□□ -1.86
VIM-207ENST00000495528 PCOTHQ58A44 107 aa3.42□□□□□ -1.86
VIM-207ENST00000495528 LINC00472Q9H8W2 130 aa3.42□□□□□ -1.86
VIM-207ENST00000495528 IGKV4-1P06312 121 aa3.41□□□□□ -1.86
VIM-207ENST00000495528 ACYP1P07311 99 aa3.41□□□□□ -1.86
VIM-207ENST00000495528 Q96NJ1 140 aa3.41□□□□□ -1.86
VIM-207ENST00000495528 UBL5Q9BZL1 73 aa3.41□□□□□ -1.86
VIM-207ENST00000495528 FAM240AA0A1B0GVK7 77 aa3.38□□□□□ -1.87
VIM-207ENST00000495528 C9orf92A6NGG3 77 aa3.38□□□□□ -1.87
VIM-207ENST00000495528 K7ERU9 68 aa3.38□□□□□ -1.87
VIM-207ENST00000495528 BPY2O14599 106 aa3.38□□□□□ -1.87
VIM-207ENST00000495528 SIGMAR1Q99720 223 aa3.38□□□□□ -1.87
VIM-207ENST00000495528 IGKV3D-7A0A0C4DH55 119 aa3.37□□□□□ -1.87
VIM-207ENST00000495528 J3KT08 172 aa3.37□□□□□ -1.87
VIM-207ENST00000495528 M0R2T5 61 aa3.37□□□□□ -1.87
VIM-207ENST00000495528 IGHV6-1A0A0B4J1U7 121 aa3.36□□□□□ -1.87
VIM-207ENST00000495528 NDUFB1O75438 58 aa3.36□□□□□ -1.87
VIM-207ENST00000495528 A8MWP4 228 aa3.35□□□□□ -1.87
VIM-207ENST00000495528 LINC00313P59037 77 aa3.35□□□□□ -1.87
VIM-207ENST00000495528 LINC00643Q86TS7 51 aa3.35□□□□□ -1.87
VIM-207ENST00000495528 FLGP20930 4061 aaPredicted RBP3.35□□□□□ -1.87
VIM-207ENST00000495528 USH2AO75445 5202 aa3.34□□□□□ -1.87
VIM-207ENST00000495528 A0A1B0GVX0 72 aa3.34□□□□□ -1.87
VIM-207ENST00000495528 PRR15Q8IV56 129 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms