RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 KRTAP13-4Q3LI77 160 aa1.98□□□□□ -2.09
CCDC66-222ENST00000494672 WDR87Q6ZQQ6 2873 aa1.97□□□□□ -2.09
CCDC66-222ENST00000494672 ABCA12Q86UK0 2595 aa1.97□□□□□ -2.09
CCDC66-222ENST00000494672 CHD7Q9P2D1 2997 aa1.97□□□□□ -2.09
CCDC66-222ENST00000494672 KRTAP12-1P59990 96 aa1.96□□□□□ -2.1
CCDC66-222ENST00000494672 ITPR3Q14573 2671 aa1.96□□□□□ -2.1
CCDC66-222ENST00000494672 PRUNE2Q8WUY3 3088 aa1.96□□□□□ -2.1
CCDC66-222ENST00000494672 LAMA3Q16787 3333 aa1.96□□□□□ -2.1
CCDC66-222ENST00000494672 ASPMQ8IZT6 3477 aa1.95□□□□□ -2.1
CCDC66-222ENST00000494672 TENM2Q9NT68 2774 aa1.95□□□□□ -2.1
CCDC66-222ENST00000494672 HECTD1Q9ULT8 2610 aa1.95□□□□□ -2.1
CCDC66-222ENST00000494672 DEFB103AP81534 67 aa1.94□□□□□ -2.1
CCDC66-222ENST00000494672 C2CD3Q4AC94 2353 aa1.94□□□□□ -2.1
CCDC66-222ENST00000494672 REV3LO60673 3130 aa1.93□□□□□ -2.1
CCDC66-222ENST00000494672 MAP1BP46821 2468 aaKnown RBP1.93□□□□□ -2.1
CCDC66-222ENST00000494672 GVINP1Q7Z2Y8 2422 aa1.93□□□□□ -2.1
CCDC66-222ENST00000494672 APC2O95996 2303 aa1.92□□□□□ -2.1
CCDC66-222ENST00000494672 CACNA1HO95180 2353 aa1.92□□□□□ -2.1
CCDC66-222ENST00000494672 A0A096LNI7 61 aa1.91□□□□□ -2.1
CCDC66-222ENST00000494672 DEFB133Q30KQ1 61 aa1.91□□□□□ -2.1
CCDC66-222ENST00000494672 HELZ2Q9BYK8 2649 aaKnown RBP1.91□□□□□ -2.1
CCDC66-222ENST00000494672 CEP250Q9BV73 2442 aa1.91□□□□□ -2.1
CCDC66-222ENST00000494672 DSPP15924 2871 aaKnown RBP1.9□□□□□ -2.1
CCDC66-222ENST00000494672 ACACBO00763 2458 aa1.9□□□□□ -2.11
CCDC66-222ENST00000494672 M0QZ58 72 aa1.9□□□□□ -2.11
CCDC66-222ENST00000494672 CRCT1Q9UGL9 99 aa1.9□□□□□ -2.11
CCDC66-222ENST00000494672 XIRP2A4UGR9 3374 aa1.9□□□□□ -2.11
CCDC66-222ENST00000494672 HTTP42858 3142 aa1.89□□□□□ -2.11
CCDC66-222ENST00000494672 SPINK6Q6UWN8 80 aa1.89□□□□□ -2.11
CCDC66-222ENST00000494672 SPEGQ15772 3267 aa1.89□□□□□ -2.11
CCDC66-222ENST00000494672 DNHD1Q96M86 4753 aa1.89□□□□□ -2.11
CCDC66-222ENST00000494672 CELSR3Q9NYQ7 3312 aa1.89□□□□□ -2.11
CCDC66-222ENST00000494672 RELNP78509 3460 aa1.89□□□□□ -2.11
CCDC66-222ENST00000494672 KALRNO60229 2985 aa1.88□□□□□ -2.11
CCDC66-222ENST00000494672 A0A096LPF7 62 aa1.88□□□□□ -2.11
CCDC66-222ENST00000494672 DNAH14Q0VDD8 3507 aa1.88□□□□□ -2.11
CCDC66-222ENST00000494672 CEP290O15078 2479 aa1.88□□□□□ -2.11
CCDC66-222ENST00000494672 F8P00451 2351 aa1.87□□□□□ -2.11
CCDC66-222ENST00000494672 SETD2Q9BYW2 2564 aaPredicted RBP1.87□□□□□ -2.11
CCDC66-222ENST00000494672 CCDC168Q8NDH2 2452 aa1.87□□□□□ -2.11
CCDC66-222ENST00000494672 NCOR1O75376 2440 aa1.87□□□□□ -2.11
CCDC66-222ENST00000494672 FBN2P35556 2912 aa1.87□□□□□ -2.11
CCDC66-222ENST00000494672 WDFY4Q6ZS81 3184 aa1.86□□□□□ -2.11
CCDC66-222ENST00000494672 MYO9AB2RTY4 2548 aa1.85□□□□□ -2.11
CCDC66-222ENST00000494672 OTOGQ6ZRI0 2925 aa1.85□□□□□ -2.11
CCDC66-222ENST00000494672 DEFB124Q8NES8 71 aa1.84□□□□□ -2.11
CCDC66-222ENST00000494672 SPG11Q96JI7 2443 aa1.83□□□□□ -2.12
CCDC66-222ENST00000494672 UBR5O95071 2799 aaPredicted RBP1.83□□□□□ -2.12
CCDC66-222ENST00000494672 NCOR2Q9Y618 2525 aa1.83□□□□□ -2.12
CCDC66-222ENST00000494672 PRRC2CQ9Y520 2896 aaKnown RBP1.83□□□□□ -2.12
CCDC66-222ENST00000494672 COL6A5A8TX70 2615 aa1.83□□□□□ -2.12
CCDC66-222ENST00000494672 H3BNG1 76 aa1.83□□□□□ -2.12
CCDC66-222ENST00000494672 POLQO75417 2590 aa1.82□□□□□ -2.12
CCDC66-222ENST00000494672 CDH23Q9H251 3354 aa1.82□□□□□ -2.12
CCDC66-222ENST00000494672 LINC01556Q5JQF7 62 aa1.82□□□□□ -2.12
CCDC66-222ENST00000494672 UBR4Q5T4S7 5183 aa1.82□□□□□ -2.12
CCDC66-222ENST00000494672 CFAP46Q8IYW2 2715 aa1.82□□□□□ -2.12
CCDC66-222ENST00000494672 CREBBPQ92793 2442 aa1.81□□□□□ -2.12
CCDC66-222ENST00000494672 EP300Q09472 2414 aaPredicted RBP1.8□□□□□ -2.12
CCDC66-222ENST00000494672 SMG1Q96Q15 3661 aaKnown RBP1.8□□□□□ -2.12
CCDC66-222ENST00000494672 CELSR2Q9HCU4 2923 aa1.8□□□□□ -2.12
CCDC66-222ENST00000494672 SPTAN1Q13813 2472 aaKnown RBP1.79□□□□□ -2.12
CCDC66-222ENST00000494672 ZFYVE26Q68DK2 2539 aa1.79□□□□□ -2.12
CCDC66-222ENST00000494672 TEX15Q9BXT5 2789 aa1.79□□□□□ -2.12
CCDC66-222ENST00000494672 MYO15AQ9UKN7 3530 aa1.79□□□□□ -2.12
CCDC66-222ENST00000494672 KRTAP4-1Q9BYQ7 146 aa1.78□□□□□ -2.12
CCDC66-222ENST00000494672 NBASA2RRP1 2371 aa1.78□□□□□ -2.12
CCDC66-222ENST00000494672 FAM186AA6NE01 2351 aa1.78□□□□□ -2.12
CCDC66-222ENST00000494672 SRRM2Q9UQ35 2752 aaKnown RBP1.76□□□□□ -2.13
CCDC66-222ENST00000494672 PCLOQ9Y6V0 5065 aa1.76□□□□□ -2.13
CCDC66-222ENST00000494672 DMBT1Q9UGM3 2413 aaPredicted RBP1.76□□□□□ -2.13
CCDC66-222ENST00000494672 J3QKU1 62 aa1.75□□□□□ -2.13
CCDC66-222ENST00000494672 SPART-AS1P0CW21 52 aa1.75□□□□□ -2.13
CCDC66-222ENST00000494672 RYR3Q15413 4870 aa1.75□□□□□ -2.13
CCDC66-222ENST00000494672 BOD1L1Q8NFC6 3051 aa1.75□□□□□ -2.13
CCDC66-222ENST00000494672 FCGBPQ9Y6R7 5405 aaPredicted RBP1.74□□□□□ -2.13
CCDC66-222ENST00000494672 KRTAP6-3Q3LI67 103 aa1.74□□□□□ -2.13
CCDC66-222ENST00000494672 BIRC6Q9NR09 4857 aa1.74□□□□□ -2.13
CCDC66-222ENST00000494672 FRYQ5TBA9 3013 aa1.73□□□□□ -2.13
CCDC66-222ENST00000494672 LOC400499M0QZD8 3231 aa1.73□□□□□ -2.13
CCDC66-222ENST00000494672 U3KQA8 63 aa1.73□□□□□ -2.13
CCDC66-222ENST00000494672 VWFP04275 2813 aa1.73□□□□□ -2.13
CCDC66-222ENST00000494672 DMXL1Q9Y485 3027 aa1.73□□□□□ -2.13
CCDC66-222ENST00000494672 TLN1Q9Y490 2541 aaKnown RBP1.72□□□□□ -2.13
CCDC66-222ENST00000494672 ITPR1Q14643 2758 aa1.72□□□□□ -2.13
CCDC66-222ENST00000494672 TENM4Q6N022 2769 aa1.72□□□□□ -2.13
CCDC66-222ENST00000494672 DMDP11532 3685 aa1.71□□□□□ -2.14
CCDC66-222ENST00000494672 NOTCH1P46531 2555 aa1.71□□□□□ -2.14
CCDC66-222ENST00000494672 CSMD1Q96PZ7 3565 aa1.71□□□□□ -2.14
CCDC66-222ENST00000494672 RIF1Q5UIP0 2472 aaKnown RBP1.71□□□□□ -2.14
CCDC66-222ENST00000494672 ATRQ13535 2644 aa1.71□□□□□ -2.14
CCDC66-222ENST00000494672 VPS13AQ96RL7 3174 aa1.71□□□□□ -2.14
CCDC66-222ENST00000494672 NBPF19A0A087WUL8 3843 aa1.71□□□□□ -2.14
CCDC66-222ENST00000494672 TNP1P09430 55 aa1.7□□□□□ -2.14
CCDC66-222ENST00000494672 HTN3P15516 51 aa1.7□□□□□ -2.14
CCDC66-222ENST00000494672 NBEAQ8NFP9 2946 aa1.7□□□□□ -2.14
CCDC66-222ENST00000494672 HIVEP3Q5T1R4 2406 aa1.7□□□□□ -2.14
CCDC66-222ENST00000494672 IGSF10Q6WRI0 2623 aa1.7□□□□□ -2.14
CCDC66-222ENST00000494672 CRYBG3Q68DQ2 2970 aa1.69□□□□□ -2.14
CCDC66-222ENST00000494672 FREM2Q5SZK8 3169 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms