RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 Q6ZQT0 140 aa4.1□□□□□ -1.75
FNDC3B-212ENST00000494000 ZNF861PO60384 105 aa4.1□□□□□ -1.75
FNDC3B-212ENST00000494000 DEFB105AQ8NG35 78 aa4.1□□□□□ -1.75
FNDC3B-212ENST00000494000 PSORS1C2Q9UIG4 136 aa4.1□□□□□ -1.75
FNDC3B-212ENST00000494000 DNAH10Q8IVF4 4471 aa4.1□□□□□ -1.75
FNDC3B-212ENST00000494000 RPL37AP61513 92 aaKnown RBP4.09□□□□□ -1.75
FNDC3B-212ENST00000494000 NREPQ16612 68 aa4.09□□□□□ -1.75
FNDC3B-212ENST00000494000 IGLV8-61A0A075B6I0 122 aa4.09□□□□□ -1.75
FNDC3B-212ENST00000494000 C1orf137Q5JT78 98 aa4.09□□□□□ -1.75
FNDC3B-212ENST00000494000 KRTAP4-8Q9BYQ9 185 aa4.09□□□□□ -1.75
FNDC3B-212ENST00000494000 TGP01266 2768 aa4.09□□□□□ -1.75
FNDC3B-212ENST00000494000 DNAH2Q9P225 4427 aa4.09□□□□□ -1.76
FNDC3B-212ENST00000494000 KRTAP10-1P60331 282 aa4.08□□□□□ -1.76
FNDC3B-212ENST00000494000 KRTAP11-1Q8IUC1 163 aa4.08□□□□□ -1.76
FNDC3B-212ENST00000494000 KMT2AQ03164 3969 aa4.08□□□□□ -1.76
FNDC3B-212ENST00000494000 DNAH17Q9UFH2 4485 aa4.08□□□□□ -1.76
FNDC3B-212ENST00000494000 A0A1B0GVY2 172 aa4.08□□□□□ -1.76
FNDC3B-212ENST00000494000 KRTAP23-1A1A580 65 aa4.08□□□□□ -1.76
FNDC3B-212ENST00000494000 IGLV7-43P04211 117 aa4.08□□□□□ -1.76
FNDC3B-212ENST00000494000 ST20-AS1Q8NBB2 130 aa4.08□□□□□ -1.76
FNDC3B-212ENST00000494000 A0A087X002 238 aa4.07□□□□□ -1.76
FNDC3B-212ENST00000494000 LINC00483Q53H64 154 aa4.07□□□□□ -1.76
FNDC3B-212ENST00000494000 SMIM29Q86T20 159 aa4.07□□□□□ -1.76
FNDC3B-212ENST00000494000 SPRR4Q96PI1 79 aa4.06□□□□□ -1.76
FNDC3B-212ENST00000494000 FRAS1Q86XX4 4008 aa4.06□□□□□ -1.76
FNDC3B-212ENST00000494000 HAMPP81172 84 aa4.06□□□□□ -1.76
FNDC3B-212ENST00000494000 PRR4Q16378 134 aa4.06□□□□□ -1.76
FNDC3B-212ENST00000494000 CSAG1Q6PB30 78 aa4.05□□□□□ -1.76
FNDC3B-212ENST00000494000 HECTD4Q9Y4D8 3996 aa4.05□□□□□ -1.76
FNDC3B-212ENST00000494000 NDUFAF8A1L188 74 aa4.05□□□□□ -1.76
FNDC3B-212ENST00000494000 BPY2O14599 106 aa4.05□□□□□ -1.76
FNDC3B-212ENST00000494000 Q8NBF4 154 aa4.05□□□□□ -1.76
FNDC3B-212ENST00000494000 A8MUU9 505 aa4.04□□□□□ -1.76
FNDC3B-212ENST00000494000 MIR22HGQ0VDD5 57 aa4.04□□□□□ -1.76
FNDC3B-212ENST00000494000 KRTAP4-8A0A0G2JLE6 195 aa4.04□□□□□ -1.76
FNDC3B-212ENST00000494000 KRTAP4-7Q9BYR0 210 aa4.04□□□□□ -1.76
FNDC3B-212ENST00000494000 Q8N9P0 234 aaPredicted RBP4.03□□□□□ -1.76
FNDC3B-212ENST00000494000 IGFL1Q6UW32 110 aa4.02□□□□□ -1.77
FNDC3B-212ENST00000494000 CYP4F30PQ9H0H9 118 aa4.02□□□□□ -1.77
FNDC3B-212ENST00000494000 CDC42SE1Q9NRR8 79 aa4.01□□□□□ -1.77
FNDC3B-212ENST00000494000 A0A1W2PNM2 257 aa4.01□□□□□ -1.77
FNDC3B-212ENST00000494000 SSBP3-AS1Q7Z2R9 100 aa4.01□□□□□ -1.77
FNDC3B-212ENST00000494000 LIMD2Q9BT23 127 aa4.01□□□□□ -1.77
FNDC3B-212ENST00000494000 SPINK6Q6UWN8 80 aa4□□□□□ -1.77
FNDC3B-212ENST00000494000 C20orf166-AS1Q96NR2 134 aa4□□□□□ -1.77
FNDC3B-212ENST00000494000 A0A1B0GVX0 72 aa4□□□□□ -1.77
FNDC3B-212ENST00000494000 DNAH8Q96JB1 4490 aa3.99□□□□□ -1.77
FNDC3B-212ENST00000494000 PRR15LQ9BU68 103 aa3.99□□□□□ -1.77
FNDC3B-212ENST00000494000 DNAH11Q96DT5 4516 aa3.99□□□□□ -1.77
FNDC3B-212ENST00000494000 SACSQ9NZJ4 4579 aa3.98□□□□□ -1.77
FNDC3B-212ENST00000494000 PKD1P98161 4303 aa3.98□□□□□ -1.77
FNDC3B-212ENST00000494000 FAT2Q9NYQ8 4349 aa3.97□□□□□ -1.77
FNDC3B-212ENST00000494000 HYDINQ4G0P3 5121 aa3.97□□□□□ -1.77
FNDC3B-212ENST00000494000 DNAH5Q8TE73 4624 aa3.95□□□□□ -1.78
FNDC3B-212ENST00000494000 A0A087WSZ3 146 aa3.95□□□□□ -1.78
FNDC3B-212ENST00000494000 LOC101927531A0A1B0GV80 90 aa3.95□□□□□ -1.78
FNDC3B-212ENST00000494000 ZCCHC13Q8WW36 166 aaKnown RBP3.95□□□□□ -1.78
FNDC3B-212ENST00000494000 CASC2Q6XLA1 102 aa3.94□□□□□ -1.78
FNDC3B-212ENST00000494000 K7ERS5 55 aa3.93□□□□□ -1.78
FNDC3B-212ENST00000494000 ASB16-AS1Q495Z4 193 aa3.93□□□□□ -1.78
FNDC3B-212ENST00000494000 Q8N1X5 172 aa3.93□□□□□ -1.78
FNDC3B-212ENST00000494000 IGKV4-1P06312 121 aa3.93□□□□□ -1.78
FNDC3B-212ENST00000494000 KRTAP1-4P0C5Y4 121 aa3.92□□□□□ -1.78
FNDC3B-212ENST00000494000 Q8N9L7 120 aa3.92□□□□□ -1.78
FNDC3B-212ENST00000494000 RYR2Q92736 4967 aa3.92□□□□□ -1.78
FNDC3B-212ENST00000494000 SPAG11AQ6PDA7 123 aa3.92□□□□□ -1.78
FNDC3B-212ENST00000494000 NDUFB1O75438 58 aa3.91□□□□□ -1.78
FNDC3B-212ENST00000494000 RPS29P62273 56 aaKnown RBP3.91□□□□□ -1.78
FNDC3B-212ENST00000494000 LINC00472Q9H8W2 130 aa3.91□□□□□ -1.78
FNDC3B-212ENST00000494000 ANAPC11Q9NYG5 84 aa3.91□□□□□ -1.78
FNDC3B-212ENST00000494000 SMR3BP02814 79 aaPredicted RBP3.91□□□□□ -1.78
FNDC3B-212ENST00000494000 TYMSOSQ8TAI1 123 aa3.91□□□□□ -1.78
FNDC3B-212ENST00000494000 SPINK1P00995 79 aa3.9□□□□□ -1.79
FNDC3B-212ENST00000494000 KRTAP10-4P60372 401 aaPredicted RBP3.9□□□□□ -1.79
FNDC3B-212ENST00000494000 A0A0G2JQZ4 141 aa3.9□□□□□ -1.79
FNDC3B-212ENST00000494000 KRTAP13-2Q52LG2 175 aa3.9□□□□□ -1.79
FNDC3B-212ENST00000494000 DSCR10P59022 87 aa3.89□□□□□ -1.79
FNDC3B-212ENST00000494000 LINC00208Q96KT6 92 aa3.89□□□□□ -1.79
FNDC3B-212ENST00000494000 KRTAP4-5Q9BYR2 181 aa3.89□□□□□ -1.79
FNDC3B-212ENST00000494000 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.88□□□□□ -1.79
FNDC3B-212ENST00000494000 KRTAP9-6A0A140TA67 174 aa3.88□□□□□ -1.79
FNDC3B-212ENST00000494000 KRTAP9-2Q9BYQ4 174 aa3.88□□□□□ -1.79
FNDC3B-212ENST00000494000 DYNC1H1Q14204 4646 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-212ENST00000494000 Q96NJ1 140 aa3.87□□□□□ -1.79
FNDC3B-212ENST00000494000 Q5VSD8 79 aa3.86□□□□□ -1.79
FNDC3B-212ENST00000494000 LINC00304Q8N9R0 145 aa3.86□□□□□ -1.79
FNDC3B-212ENST00000494000 LRP1BQ9NZR2 4599 aa3.86□□□□□ -1.79
FNDC3B-212ENST00000494000 K7EQZ3 153 aa3.86□□□□□ -1.79
FNDC3B-212ENST00000494000 SPINK7P58062 85 aa3.86□□□□□ -1.79
FNDC3B-212ENST00000494000 KMT2CQ8NEZ4 4911 aaKnown RBP3.84□□□□□ -1.79
FNDC3B-212ENST00000494000 SPANXA2-OT1Q8N9U9 137 aa3.84□□□□□ -1.8
FNDC3B-212ENST00000494000 LINC01558Q9Y6Z2 57 aa3.84□□□□□ -1.8
FNDC3B-212ENST00000494000 DEFB116Q30KQ4 102 aa3.83□□□□□ -1.8
FNDC3B-212ENST00000494000 PKHD1P08F94 4074 aa3.83□□□□□ -1.8
FNDC3B-212ENST00000494000 VPS13BQ7Z7G8 4022 aa3.82□□□□□ -1.8
FNDC3B-212ENST00000494000 SRRM2Q9UQ35 2752 aaKnown RBP3.82□□□□□ -1.8
FNDC3B-212ENST00000494000 APOBP04114 4563 aaKnown RBP3.81□□□□□ -1.8
FNDC3B-212ENST00000494000 KRTAP29-1A8MX34 341 aaPredicted RBP3.81□□□□□ -1.8
FNDC3B-212ENST00000494000 TP53AIP1Q9HCN2 124 aa3.81□□□□□ -1.8
FNDC3B-212ENST00000494000 MMP24-AS1A0A0U1RRL7 71 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms