RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 KRTAP11-1Q8IUC1 163 aa4.39□□□□□ -1.71
HERC4-211ENST00000492996 PCLOQ9Y6V0 5065 aa4.38□□□□□ -1.71
HERC4-211ENST00000492996 A0A1W2PNM2 257 aa4.38□□□□□ -1.71
HERC4-211ENST00000492996 A6NN06 94 aa4.38□□□□□ -1.71
HERC4-211ENST00000492996 IGLV5-48A0A075B6I7 105 aa4.37□□□□□ -1.71
HERC4-211ENST00000492996 PANO1I0J062 215 aa4.37□□□□□ -1.71
HERC4-211ENST00000492996 PRAC1Q96KF2 57 aa4.37□□□□□ -1.71
HERC4-211ENST00000492996 KIAA1109Q2LD37 5005 aa4.37□□□□□ -1.71
HERC4-211ENST00000492996 C14orf177Q52M58 125 aa4.37□□□□□ -1.71
HERC4-211ENST00000492996 C9orf163Q8N9P6 203 aa4.36□□□□□ -1.71
HERC4-211ENST00000492996 LINC00208Q96KT6 92 aa4.36□□□□□ -1.71
HERC4-211ENST00000492996 C1orf134Q5TEV5 83 aa4.36□□□□□ -1.71
HERC4-211ENST00000492996 Q8N9P0 234 aaPredicted RBP4.36□□□□□ -1.71
HERC4-211ENST00000492996 ABCA13Q86UQ4 5058 aa4.36□□□□□ -1.71
HERC4-211ENST00000492996 MP68P56378 58 aa4.35□□□□□ -1.71
HERC4-211ENST00000492996 TNP2Q05952 138 aa4.35□□□□□ -1.71
HERC4-211ENST00000492996 CYP4F30PQ9H0H9 118 aa4.35□□□□□ -1.71
HERC4-211ENST00000492996 NDUFB1O75438 58 aa4.35□□□□□ -1.71
HERC4-211ENST00000492996 Q8NBF4 154 aa4.34□□□□□ -1.71
HERC4-211ENST00000492996 DEFB116Q30KQ4 102 aa4.34□□□□□ -1.71
HERC4-211ENST00000492996 LINC01554Q52M75 96 aa4.34□□□□□ -1.71
HERC4-211ENST00000492996 CDC42SE1Q9NRR8 79 aa4.34□□□□□ -1.72
HERC4-211ENST00000492996 MOBPQ13875 183 aa4.33□□□□□ -1.72
HERC4-211ENST00000492996 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.33□□□□□ -1.72
HERC4-211ENST00000492996 LINC00313P59037 77 aa4.33□□□□□ -1.72
HERC4-211ENST00000492996 IGFL1Q6UW32 110 aa4.33□□□□□ -1.72
HERC4-211ENST00000492996 A0A087WSZ3 146 aa4.31□□□□□ -1.72
HERC4-211ENST00000492996 A0A087WTM6 91 aa4.31□□□□□ -1.72
HERC4-211ENST00000492996 LOC101927531A0A1B0GV80 90 aa4.31□□□□□ -1.72
HERC4-211ENST00000492996 CASC2Q6XLA1 102 aa4.31□□□□□ -1.72
HERC4-211ENST00000492996 Q75L30 129 aa4.31□□□□□ -1.72
HERC4-211ENST00000492996 WFDC13Q8IUB5 93 aa4.3□□□□□ -1.72
HERC4-211ENST00000492996 SPRR4Q96PI1 79 aa4.3□□□□□ -1.72
HERC4-211ENST00000492996 SPAG11AQ6PDA7 123 aa4.3□□□□□ -1.72
HERC4-211ENST00000492996 K7EQZ3 153 aa4.29□□□□□ -1.72
HERC4-211ENST00000492996 LY6G6CO95867 125 aa4.29□□□□□ -1.72
HERC4-211ENST00000492996 DSCR10P59022 87 aa4.29□□□□□ -1.72
HERC4-211ENST00000492996 ZCCHC13Q8WW36 166 aaKnown RBP4.28□□□□□ -1.72
HERC4-211ENST00000492996 ADM2Q7Z4H4 148 aa4.28□□□□□ -1.72
HERC4-211ENST00000492996 SPACA4Q8TDM5 124 aa4.28□□□□□ -1.72
HERC4-211ENST00000492996 ZNF706Q9Y5V0 76 aaPredicted RBP4.28□□□□□ -1.72
HERC4-211ENST00000492996 IGLV9-49A0A0B4J1Y8 123 aa4.27□□□□□ -1.73
HERC4-211ENST00000492996 RPL37AP61513 92 aaKnown RBP4.27□□□□□ -1.73
HERC4-211ENST00000492996 A0A1B0GW54 56 aa4.27□□□□□ -1.73
HERC4-211ENST00000492996 COA5Q86WW8 74 aa4.26□□□□□ -1.73
HERC4-211ENST00000492996 RETNLBQ9BQ08 111 aa4.26□□□□□ -1.73
HERC4-211ENST00000492996 ANAPC11Q9NYG5 84 aa4.26□□□□□ -1.73
HERC4-211ENST00000492996 IGLV5-52A0A0A0MRZ9 124 aa4.25□□□□□ -1.73
HERC4-211ENST00000492996 H0Y9J4 135 aa4.25□□□□□ -1.73
HERC4-211ENST00000492996 SPINK7P58062 85 aa4.25□□□□□ -1.73
HERC4-211ENST00000492996 IGLV8-61A0A075B6I0 122 aa4.25□□□□□ -1.73
HERC4-211ENST00000492996 PSORS1C2Q9UIG4 136 aa4.25□□□□□ -1.73
HERC4-211ENST00000492996 MYCBP2O75592 4640 aa4.24□□□□□ -1.73
HERC4-211ENST00000492996 H0Y9P7 68 aa4.24□□□□□ -1.73
HERC4-211ENST00000492996 SPRR1BP22528 89 aa4.24□□□□□ -1.73
HERC4-211ENST00000492996 KRTAP13-1Q8IUC0 172 aa4.24□□□□□ -1.73
HERC4-211ENST00000492996 PCOTHQ58A44 107 aa4.22□□□□□ -1.73
HERC4-211ENST00000492996 PLAC8Q9NZF1 115 aa4.21□□□□□ -1.74
HERC4-211ENST00000492996 PLA2G1BP04054 148 aaKnown RBP4.2□□□□□ -1.74
HERC4-211ENST00000492996 SPANXA2-OT1Q8N9U9 137 aa4.2□□□□□ -1.74
HERC4-211ENST00000492996 KRTAP10-2P60368 255 aa4.2□□□□□ -1.74
HERC4-211ENST00000492996 ZNF861PO60384 105 aa4.19□□□□□ -1.74
HERC4-211ENST00000492996 LINC00472Q9H8W2 130 aa4.19□□□□□ -1.74
HERC4-211ENST00000492996 LINC01558Q9Y6Z2 57 aa4.19□□□□□ -1.74
HERC4-211ENST00000492996 MT1HL1P0DM35 61 aa4.17□□□□□ -1.74
HERC4-211ENST00000492996 CSAG1Q6PB30 78 aa4.17□□□□□ -1.74
HERC4-211ENST00000492996 A8MWP4 228 aa4.17□□□□□ -1.74
HERC4-211ENST00000492996 KRTAP10-1P60331 282 aa4.17□□□□□ -1.74
HERC4-211ENST00000492996 KRTAP10-8P60410 259 aa4.17□□□□□ -1.74
HERC4-211ENST00000492996 CIRBP-AS1Q8TBR5 109 aa4.17□□□□□ -1.74
HERC4-211ENST00000492996 KRTAP4-5Q9BYR2 181 aa4.17□□□□□ -1.74
HERC4-211ENST00000492996 IGLV7-43P04211 117 aa4.16□□□□□ -1.74
HERC4-211ENST00000492996 LINC00483Q53H64 154 aa4.16□□□□□ -1.74
HERC4-211ENST00000492996 SPINK6Q6UWN8 80 aa4.15□□□□□ -1.74
HERC4-211ENST00000492996 IGHV6-1A0A0B4J1U7 121 aa4.14□□□□□ -1.75
HERC4-211ENST00000492996 H3BPC8 53 aa4.14□□□□□ -1.75
HERC4-211ENST00000492996 Q96NJ1 140 aa4.14□□□□□ -1.75
HERC4-211ENST00000492996 IGLV7-46A0A075B6I9 117 aa4.13□□□□□ -1.75
HERC4-211ENST00000492996 MMP24-AS1A0A0U1RRL7 71 aa4.13□□□□□ -1.75
HERC4-211ENST00000492996 Q5VSD8 79 aa4.12□□□□□ -1.75
HERC4-211ENST00000492996 HERC1Q15751 4861 aa4.12□□□□□ -1.75
HERC4-211ENST00000492996 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
HERC4-211ENST00000492996 HMCN2Q8NDA2 5059 aa4.11□□□□□ -1.75
HERC4-211ENST00000492996 A0A087X002 238 aa4.11□□□□□ -1.75
HERC4-211ENST00000492996 NOTCH2NLQ7Z3S9 236 aa4.11□□□□□ -1.75
HERC4-211ENST00000492996 FAM229AH3BQW9 127 aa4.1□□□□□ -1.75
HERC4-211ENST00000492996 C8orf17Q9NRJ1 99 aa4.1□□□□□ -1.75
HERC4-211ENST00000492996 A0A1B0GVX0 72 aa4.09□□□□□ -1.76
HERC4-211ENST00000492996 HRES1P13985 223 aa4.08□□□□□ -1.76
HERC4-211ENST00000492996 RPS29P62273 56 aaKnown RBP4.08□□□□□ -1.76
HERC4-211ENST00000492996 A0A1B0GU69 56 aa4.06□□□□□ -1.76
HERC4-211ENST00000492996 KRTAP13-2Q52LG2 175 aa4.06□□□□□ -1.76
HERC4-211ENST00000492996 MIR22HGQ0VDD5 57 aa4.05□□□□□ -1.76
HERC4-211ENST00000492996 ASB16-AS1Q495Z4 193 aa4.05□□□□□ -1.76
HERC4-211ENST00000492996 SSBP3-AS1Q7Z2R9 100 aa4.05□□□□□ -1.76
HERC4-211ENST00000492996 MRPL34Q9BQ48 92 aaKnown RBP4.05□□□□□ -1.76
HERC4-211ENST00000492996 SMR3BP02814 79 aaPredicted RBP4.04□□□□□ -1.76
HERC4-211ENST00000492996 ROMO1P60602 79 aa4.03□□□□□ -1.76
HERC4-211ENST00000492996 TP53AIP1Q9HCN2 124 aa4.02□□□□□ -1.77
HERC4-211ENST00000492996 UQCR11O14957 56 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms