RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 A0A087WSZ3 146 aa6.13□□□□□ -1.43
TMEM39A-211ENST00000491685 A0A1W2PNM2 257 aa6.12□□□□□ -1.43
TMEM39A-211ENST00000491685 C1orf195Q5TG92 126 aa6.12□□□□□ -1.43
TMEM39A-211ENST00000491685 UBL5Q9BZL1 73 aa6.11□□□□□ -1.43
TMEM39A-211ENST00000491685 J3KT08 172 aa6.09□□□□□ -1.43
TMEM39A-211ENST00000491685 ATP5EP2Q5VTU8 51 aa6.09□□□□□ -1.43
TMEM39A-211ENST00000491685 NREPQ16612 68 aa6.07□□□□□ -1.44
TMEM39A-211ENST00000491685 XP32Q5T750 250 aa6.06□□□□□ -1.44
TMEM39A-211ENST00000491685 LINC00643Q86TS7 51 aa6.06□□□□□ -1.44
TMEM39A-211ENST00000491685 CXCL6P80162 114 aa6.05□□□□□ -1.44
TMEM39A-211ENST00000491685 LINC00846Q9NV44 126 aa6.05□□□□□ -1.44
TMEM39A-211ENST00000491685 IGKV4-1P06312 121 aa6.04□□□□□ -1.44
TMEM39A-211ENST00000491685 NDUFB1O75438 58 aa6.02□□□□□ -1.45
TMEM39A-211ENST00000491685 LCE2CQ5TA81 110 aa6.02□□□□□ -1.45
TMEM39A-211ENST00000491685 Q6ZVQ6 151 aa6.02□□□□□ -1.45
TMEM39A-211ENST00000491685 LINC00472Q9H8W2 130 aa6.02□□□□□ -1.45
TMEM39A-211ENST00000491685 KRTAP19-2Q3LHN2 52 aa6.01□□□□□ -1.45
TMEM39A-211ENST00000491685 SIGMAR1Q99720 223 aa6.01□□□□□ -1.45
TMEM39A-211ENST00000491685 IMUPQ9GZP8 106 aa6.01□□□□□ -1.45
TMEM39A-211ENST00000491685 C9orf92A6NGG3 77 aa6□□□□□ -1.45
TMEM39A-211ENST00000491685 BPY2O14599 106 aa5.99□□□□□ -1.45
TMEM39A-211ENST00000491685 DEFB116Q30KQ4 102 aa5.99□□□□□ -1.45
TMEM39A-211ENST00000491685 LINC00313P59037 77 aa5.98□□□□□ -1.45
TMEM39A-211ENST00000491685 Q96NJ1 140 aa5.98□□□□□ -1.45
TMEM39A-211ENST00000491685 PCOTHQ58A44 107 aa5.96□□□□□ -1.46
TMEM39A-211ENST00000491685 A8MWP4 228 aa5.95□□□□□ -1.46
TMEM39A-211ENST00000491685 C8orf87E5RJ46 101 aa5.95□□□□□ -1.46
TMEM39A-211ENST00000491685 IGHV6-1A0A0B4J1U7 121 aa5.94□□□□□ -1.46
TMEM39A-211ENST00000491685 MT1HP80294 61 aa5.94□□□□□ -1.46
TMEM39A-211ENST00000491685 A0A1B0GVX0 72 aa5.93□□□□□ -1.46
TMEM39A-211ENST00000491685 PRR15Q8IV56 129 aa5.92□□□□□ -1.46
TMEM39A-211ENST00000491685 DSCR10P59022 87 aa5.91□□□□□ -1.46
TMEM39A-211ENST00000491685 ATP11AUNQ6ZP68 121 aa5.91□□□□□ -1.46
TMEM39A-211ENST00000491685 RPL37P61927 97 aaKnown RBP5.89□□□□□ -1.47
TMEM39A-211ENST00000491685 Q75L30 129 aa5.89□□□□□ -1.47
TMEM39A-211ENST00000491685 KRTAP9-7A8MTY7 169 aa5.88□□□□□ -1.47
TMEM39A-211ENST00000491685 IGKV3D-7A0A0C4DH55 119 aa5.86□□□□□ -1.47
TMEM39A-211ENST00000491685 COX6B2Q6YFQ2 88 aa5.85□□□□□ -1.47
TMEM39A-211ENST00000491685 C20orf166-AS1Q96NR2 134 aa5.85□□□□□ -1.47
TMEM39A-211ENST00000491685 C8orf17Q9NRJ1 99 aa5.85□□□□□ -1.47
TMEM39A-211ENST00000491685 K7EQZ3 153 aa5.84□□□□□ -1.47
TMEM39A-211ENST00000491685 LORP23490 312 aaPredicted RBP5.84□□□□□ -1.47
TMEM39A-211ENST00000491685 HIST1H4AP62805 103 aaKnown RBP5.84□□□□□ -1.47
TMEM39A-211ENST00000491685 A8MUU9 505 aa5.83□□□□□ -1.48
TMEM39A-211ENST00000491685 HCG22E2RYF7 251 aa5.83□□□□□ -1.48
TMEM39A-211ENST00000491685 MT-ATP8P03928 68 aa5.83□□□□□ -1.48
TMEM39A-211ENST00000491685 KRTAP10-6P60371 365 aaPredicted RBP5.83□□□□□ -1.48
TMEM39A-211ENST00000491685 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.82□□□□□ -1.48
TMEM39A-211ENST00000491685 M0R2T5 61 aa5.82□□□□□ -1.48
TMEM39A-211ENST00000491685 SCGB1A1P11684 91 aa5.82□□□□□ -1.48
TMEM39A-211ENST00000491685 NOTCH2NLQ7Z3S9 236 aa5.82□□□□□ -1.48
TMEM39A-211ENST00000491685 SMIM20Q8N5G0 67 aa5.82□□□□□ -1.48
TMEM39A-211ENST00000491685 TMEM254Q8TBM7 123 aa5.82□□□□□ -1.48
TMEM39A-211ENST00000491685 FLGP20930 4061 aaPredicted RBP5.82□□□□□ -1.48
TMEM39A-211ENST00000491685 hDV103S1A0JD37 113 aa5.81□□□□□ -1.48
TMEM39A-211ENST00000491685 MRPL34Q9BQ48 92 aaKnown RBP5.8□□□□□ -1.48
TMEM39A-211ENST00000491685 TP53AIP1Q9HCN2 124 aa5.8□□□□□ -1.48
TMEM39A-211ENST00000491685 MMP24-AS1A0A0U1RRL7 71 aa5.79□□□□□ -1.48
TMEM39A-211ENST00000491685 KRTAP16-1A8MUX0 517 aa5.79□□□□□ -1.48
TMEM39A-211ENST00000491685 CASC2Q6XLA1 102 aa5.79□□□□□ -1.48
TMEM39A-211ENST00000491685 Q8N9P0 234 aaPredicted RBP5.78□□□□□ -1.48
TMEM39A-211ENST00000491685 NDUFS5O43920 106 aa5.77□□□□□ -1.49
TMEM39A-211ENST00000491685 ATOX1O00244 68 aa5.76□□□□□ -1.49
TMEM39A-211ENST00000491685 Q8N9L7 120 aa5.76□□□□□ -1.49
TMEM39A-211ENST00000491685 WFDC13Q8IUB5 93 aa5.75□□□□□ -1.49
TMEM39A-211ENST00000491685 ZCCHC13Q8WW36 166 aaKnown RBP5.73□□□□□ -1.49
TMEM39A-211ENST00000491685 A0A087WVE0 104 aa5.72□□□□□ -1.49
TMEM39A-211ENST00000491685 FAM236AA0A1B0GUQ0 79 aa5.72□□□□□ -1.49
TMEM39A-211ENST00000491685 FAM236BA0A1B0GV22 79 aa5.72□□□□□ -1.49
TMEM39A-211ENST00000491685 UQCRQO14949 82 aa5.72□□□□□ -1.49
TMEM39A-211ENST00000491685 H3BPC8 53 aa5.69□□□□□ -1.5
TMEM39A-211ENST00000491685 C5orf47Q569G3 176 aa5.69□□□□□ -1.5
TMEM39A-211ENST00000491685 TRAV7A0A075B6U4 112 aa5.68□□□□□ -1.5
TMEM39A-211ENST00000491685 OCR1Q9BZK8 76 aa5.68□□□□□ -1.5
TMEM39A-211ENST00000491685 SSPOA2VEC9 5147 aa5.68□□□□□ -1.5
TMEM39A-211ENST00000491685 USH2AO75445 5202 aa5.66□□□□□ -1.5
TMEM39A-211ENST00000491685 SPINK7P58062 85 aa5.65□□□□□ -1.5
TMEM39A-211ENST00000491685 SERP2Q8N6R1 65 aa5.65□□□□□ -1.5
TMEM39A-211ENST00000491685 RBM12B-AS1Q9P1G2 102 aa5.65□□□□□ -1.5
TMEM39A-211ENST00000491685 TRAV22A0A0B4J277 110 aa5.64□□□□□ -1.51
TMEM39A-211ENST00000491685 MP68P56378 58 aa5.63□□□□□ -1.51
TMEM39A-211ENST00000491685 FCGBPQ9Y6R7 5405 aaPredicted RBP5.6□□□□□ -1.51
TMEM39A-211ENST00000491685 LOC101927531A0A1B0GV80 90 aa5.6□□□□□ -1.51
TMEM39A-211ENST00000491685 FAM236DA0A1B0GTK5 79 aa5.59□□□□□ -1.51
TMEM39A-211ENST00000491685 FAM236CP0DP71 79 aa5.59□□□□□ -1.51
TMEM39A-211ENST00000491685 COX7CP15954 63 aa5.59□□□□□ -1.51
TMEM39A-211ENST00000491685 Q5W150 140 aa5.59□□□□□ -1.51
TMEM39A-211ENST00000491685 ANAPC13Q9BS18 74 aa5.59□□□□□ -1.51
TMEM39A-211ENST00000491685 KRTAP9-8Q9BYQ0 159 aa5.59□□□□□ -1.51
TMEM39A-211ENST00000491685 C7orf65Q6ZTY9 151 aa5.58□□□□□ -1.52
TMEM39A-211ENST00000491685 IGKV2D-30A0A075B6S6 120 aa5.56□□□□□ -1.52
TMEM39A-211ENST00000491685 H0Y9P7 68 aa5.56□□□□□ -1.52
TMEM39A-211ENST00000491685 NDUFC1O43677 76 aa5.56□□□□□ -1.52
TMEM39A-211ENST00000491685 IGKV2-30P06310 120 aa5.56□□□□□ -1.52
TMEM39A-211ENST00000491685 KLKP1Q107X0 134 aa5.55□□□□□ -1.52
TMEM39A-211ENST00000491685 HRES1P13985 223 aa5.53□□□□□ -1.52
TMEM39A-211ENST00000491685 C1orf64Q8NEQ6 169 aa5.53□□□□□ -1.52
TMEM39A-211ENST00000491685 MT2AP02795 61 aa5.51□□□□□ -1.53
TMEM39A-211ENST00000491685 LINC00208Q96KT6 92 aa5.5□□□□□ -1.53
TMEM39A-211ENST00000491685 CYP4F30PQ9H0H9 118 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms