RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 BVES-AS1Q5T3Y7 98 aa5.11□□□□□ -1.59
SMARCC1-205ENST00000483847 IGKV4-1P06312 121 aa5.1□□□□□ -1.59
SMARCC1-205ENST00000483847 UBE2V1Q13404 147 aa5.1□□□□□ -1.59
SMARCC1-205ENST00000483847 KMT2DO14686 5537 aa5.09□□□□□ -1.59
SMARCC1-205ENST00000483847 NDUFV3P56181 108 aaKnown RBP5.09□□□□□ -1.59
SMARCC1-205ENST00000483847 SPINK7P58062 85 aa5.09□□□□□ -1.59
SMARCC1-205ENST00000483847 HSD52Q0P140 79 aa5.09□□□□□ -1.59
SMARCC1-205ENST00000483847 A0A1W2PNM2 257 aa5.08□□□□□ -1.6
SMARCC1-205ENST00000483847 DEFB116Q30KQ4 102 aa5.08□□□□□ -1.6
SMARCC1-205ENST00000483847 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
SMARCC1-205ENST00000483847 HIGD1BQ9P298 99 aa5.08□□□□□ -1.6
SMARCC1-205ENST00000483847 TAX1BP3O14907 124 aa5.07□□□□□ -1.6
SMARCC1-205ENST00000483847 TRIAP1O43715 76 aa5.07□□□□□ -1.6
SMARCC1-205ENST00000483847 C2orf91Q6ZV80 131 aa5.07□□□□□ -1.6
SMARCC1-205ENST00000483847 IGHV6-1A0A0B4J1U7 121 aa5.06□□□□□ -1.6
SMARCC1-205ENST00000483847 A6NN06 94 aa5.05□□□□□ -1.6
SMARCC1-205ENST00000483847 H3BMG7 143 aa5.05□□□□□ -1.6
SMARCC1-205ENST00000483847 KRTAP5-9P26371 169 aa5.05□□□□□ -1.6
SMARCC1-205ENST00000483847 GTF2H5Q6ZYL4 71 aa5.05□□□□□ -1.6
SMARCC1-205ENST00000483847 WFDC13Q8IUB5 93 aa5.05□□□□□ -1.6
SMARCC1-205ENST00000483847 ZCCHC13Q8WW36 166 aaKnown RBP5.05□□□□□ -1.6
SMARCC1-205ENST00000483847 KRTAP3-1Q9BYR8 98 aa5.05□□□□□ -1.6
SMARCC1-205ENST00000483847 FAM218AQ96MZ4 157 aa5.03□□□□□ -1.6
SMARCC1-205ENST00000483847 PCP4P48539 62 aa5.02□□□□□ -1.61
SMARCC1-205ENST00000483847 LINC00472Q9H8W2 130 aa5.02□□□□□ -1.61
SMARCC1-205ENST00000483847 CEND1Q8N111 149 aa5.01□□□□□ -1.61
SMARCC1-205ENST00000483847 K7EP34 96 aa5□□□□□ -1.61
SMARCC1-205ENST00000483847 KRTAP2-3P0C7H8 128 aa5□□□□□ -1.61
SMARCC1-205ENST00000483847 FABP2P12104 132 aa5□□□□□ -1.61
SMARCC1-205ENST00000483847 KRTAP2-4Q9BYR9 128 aa5□□□□□ -1.61
SMARCC1-205ENST00000483847 MT1BP07438 61 aa4.99□□□□□ -1.61
SMARCC1-205ENST00000483847 HIST1H4GQ99525 98 aa4.99□□□□□ -1.61
SMARCC1-205ENST00000483847 KRTAP4-8Q9BYQ9 185 aa4.99□□□□□ -1.61
SMARCC1-205ENST00000483847 TRBV7-4A0A0J9YYF1 115 aa4.98□□□□□ -1.61
SMARCC1-205ENST00000483847 A0A1W2PPM0 123 aa4.98□□□□□ -1.61
SMARCC1-205ENST00000483847 K7ERU9 68 aa4.98□□□□□ -1.61
SMARCC1-205ENST00000483847 RAB37Q96AX2 223 aa4.98□□□□□ -1.61
SMARCC1-205ENST00000483847 SPCS1Q9Y6A9 102 aa4.98□□□□□ -1.61
SMARCC1-205ENST00000483847 A0A1B0GV72 72 aa4.97□□□□□ -1.61
SMARCC1-205ENST00000483847 A0A1B0GVX0 72 aa4.97□□□□□ -1.61
SMARCC1-205ENST00000483847 FXYD2P54710 66 aa4.97□□□□□ -1.61
SMARCC1-205ENST00000483847 C8orf87E5RJ46 101 aa4.96□□□□□ -1.62
SMARCC1-205ENST00000483847 KRTAP4-12Q9BQ66 201 aa4.96□□□□□ -1.62
SMARCC1-205ENST00000483847 H0YGX0 51 aa4.95□□□□□ -1.62
SMARCC1-205ENST00000483847 SNCGO76070 127 aa4.95□□□□□ -1.62
SMARCC1-205ENST00000483847 LYRM7Q5U5X0 104 aa4.95□□□□□ -1.62
SMARCC1-205ENST00000483847 ANKRD29Q8N6D5 301 aa4.95□□□□□ -1.62
SMARCC1-205ENST00000483847 KRTAP10-5P60370 271 aa4.94□□□□□ -1.62
SMARCC1-205ENST00000483847 H1FX-AS1Q4G0G2 97 aa4.94□□□□□ -1.62
SMARCC1-205ENST00000483847 F8W1H4 67 aa4.93□□□□□ -1.62
SMARCC1-205ENST00000483847 J3QR89 54 aa4.92□□□□□ -1.62
SMARCC1-205ENST00000483847 K7ERJ3 54 aa4.92□□□□□ -1.62
SMARCC1-205ENST00000483847 NAA38Q9BRA0 125 aaKnown RBP4.92□□□□□ -1.62
SMARCC1-205ENST00000483847 VPS25Q9BRG1 176 aa4.92□□□□□ -1.62
SMARCC1-205ENST00000483847 TRACP01848 142 aa4.91□□□□□ -1.62
SMARCC1-205ENST00000483847 CCKP06307 115 aa4.91□□□□□ -1.62
SMARCC1-205ENST00000483847 Q5VV11 94 aa4.91□□□□□ -1.62
SMARCC1-205ENST00000483847 KRTAP19-8Q3LI54 63 aa4.89□□□□□ -1.63
SMARCC1-205ENST00000483847 A0A1B0GX51 115 aa4.88□□□□□ -1.63
SMARCC1-205ENST00000483847 LCE4AQ5TA78 99 aa4.88□□□□□ -1.63
SMARCC1-205ENST00000483847 PRO1854Q9UHT4 67 aa4.88□□□□□ -1.63
SMARCC1-205ENST00000483847 A0A0B4J2C4 111 aa4.86□□□□□ -1.63
SMARCC1-205ENST00000483847 SCGB1C2P0DMR2 95 aa4.86□□□□□ -1.63
SMARCC1-205ENST00000483847 PSMB2P49721 201 aa4.85□□□□□ -1.63
SMARCC1-205ENST00000483847 SPRR2GQ9BYE4 73 aa4.85□□□□□ -1.63
SMARCC1-205ENST00000483847 IGKV3D-7A0A0C4DH55 119 aa4.84□□□□□ -1.63
SMARCC1-205ENST00000483847 FAM236AA0A1B0GUQ0 79 aa4.83□□□□□ -1.64
SMARCC1-205ENST00000483847 FAM236BA0A1B0GV22 79 aa4.83□□□□□ -1.64
SMARCC1-205ENST00000483847 COX6CP09669 75 aa4.83□□□□□ -1.64
SMARCC1-205ENST00000483847 SPRR2EP22531 72 aa4.83□□□□□ -1.64
SMARCC1-205ENST00000483847 SPRR2BP35325 72 aa4.83□□□□□ -1.64
SMARCC1-205ENST00000483847 SPRR2AP35326 72 aa4.83□□□□□ -1.64
SMARCC1-205ENST00000483847 C8orf17Q9NRJ1 99 aa4.83□□□□□ -1.64
SMARCC1-205ENST00000483847 ORMDL1Q9P0S3 153 aa4.83□□□□□ -1.64
SMARCC1-205ENST00000483847 PRO0461Q9UI25 63 aa4.83□□□□□ -1.64
SMARCC1-205ENST00000483847 J3KT08 172 aa4.82□□□□□ -1.64
SMARCC1-205ENST00000483847 ETDBQ3ZM63 59 aa4.82□□□□□ -1.64
SMARCC1-205ENST00000483847 ATXN8Q156A1 80 aa4.81□□□□□ -1.64
SMARCC1-205ENST00000483847 SPRR2FQ96RM1 72 aa4.81□□□□□ -1.64
SMARCC1-205ENST00000483847 DSCR8Q96T75 97 aa4.81□□□□□ -1.64
SMARCC1-205ENST00000483847 KRTAP2-2Q9BYT5 123 aa4.81□□□□□ -1.64
SMARCC1-205ENST00000483847 KRTAP2-1Q9BYU5 128 aa4.81□□□□□ -1.64
SMARCC1-205ENST00000483847 DNAL4O96015 105 aa4.8□□□□□ -1.64
SMARCC1-205ENST00000483847 SCGB1A1P11684 91 aa4.8□□□□□ -1.64
SMARCC1-205ENST00000483847 TMEM256-PLSCR3K7ERE1 68 aa4.79□□□□□ -1.64
SMARCC1-205ENST00000483847 NDUFB1O75438 58 aa4.79□□□□□ -1.64
SMARCC1-205ENST00000483847 LCE3BQ5TA77 95 aa4.79□□□□□ -1.64
SMARCC1-205ENST00000483847 C5orf47Q569G3 176 aa4.78□□□□□ -1.64
SMARCC1-205ENST00000483847 Q6ZVQ6 151 aa4.78□□□□□ -1.64
SMARCC1-205ENST00000483847 C9JAW5 83 aa4.77□□□□□ -1.65
SMARCC1-205ENST00000483847 H3BQ85 93 aa4.77□□□□□ -1.65
SMARCC1-205ENST00000483847 GPR98Q8WXG9 6306 aa4.77□□□□□ -1.65
SMARCC1-205ENST00000483847 H3BT86 120 aa4.76□□□□□ -1.65
SMARCC1-205ENST00000483847 Q6ZQT0 140 aa4.76□□□□□ -1.65
SMARCC1-205ENST00000483847 IGKV2D-30A0A075B6S6 120 aa4.75□□□□□ -1.65
SMARCC1-205ENST00000483847 IGKV2-30P06310 120 aa4.75□□□□□ -1.65
SMARCC1-205ENST00000483847 RBM3P98179 157 aaKnown RBP4.74□□□□□ -1.65
SMARCC1-205ENST00000483847 LCE1AQ5T7P2 110 aa4.73□□□□□ -1.65
SMARCC1-205ENST00000483847 IMUPQ9GZP8 106 aa4.73□□□□□ -1.65
SMARCC1-205ENST00000483847 C4orf26Q17RF5 130 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms