RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 Q5W150 140 aa4.66□□□□□ -1.66
COL4A5-205ENST00000483338 NOTCH2NLQ7Z3S9 236 aa4.64□□□□□ -1.67
COL4A5-205ENST00000483338 MRPL34Q9BQ48 92 aaKnown RBP4.64□□□□□ -1.67
COL4A5-205ENST00000483338 KRTAP13-3Q3SY46 172 aa4.64□□□□□ -1.67
COL4A5-205ENST00000483338 LINC00304Q8N9R0 145 aa4.64□□□□□ -1.67
COL4A5-205ENST00000483338 IGLV7-43P04211 117 aa4.63□□□□□ -1.67
COL4A5-205ENST00000483338 A0A1B0GVX0 72 aa4.62□□□□□ -1.67
COL4A5-205ENST00000483338 CASC10Q5T4H9 136 aa4.62□□□□□ -1.67
COL4A5-205ENST00000483338 CRIPTQ9P021 101 aa4.61□□□□□ -1.67
COL4A5-205ENST00000483338 KRTAP21-3Q3LHN1 58 aa4.61□□□□□ -1.67
COL4A5-205ENST00000483338 TENM3Q9P273 2699 aa4.61□□□□□ -1.67
COL4A5-205ENST00000483338 CDK2AP2O75956 126 aa4.61□□□□□ -1.67
COL4A5-205ENST00000483338 IGLV9-49A0A0B4J1Y8 123 aa4.6□□□□□ -1.67
COL4A5-205ENST00000483338 NDUFAF8A1L188 74 aa4.6□□□□□ -1.67
COL4A5-205ENST00000483338 SPRR1BP22528 89 aa4.6□□□□□ -1.67
COL4A5-205ENST00000483338 KRTAP16-1A8MUX0 517 aa4.59□□□□□ -1.67
COL4A5-205ENST00000483338 SPINK6Q6UWN8 80 aa4.59□□□□□ -1.67
COL4A5-205ENST00000483338 STAB2Q8WWQ8 2551 aa4.59□□□□□ -1.67
COL4A5-205ENST00000483338 CHTF8P0CG12 524 aa4.58□□□□□ -1.68
COL4A5-205ENST00000483338 COL7A1Q02388 2944 aa4.58□□□□□ -1.68
COL4A5-205ENST00000483338 C20orf166-AS1Q96NR2 134 aa4.58□□□□□ -1.68
COL4A5-205ENST00000483338 H0YAA0 97 aa4.55□□□□□ -1.68
COL4A5-205ENST00000483338 LINC01556Q5JQF7 62 aa4.55□□□□□ -1.68
COL4A5-205ENST00000483338 KRTAP11-1Q8IUC1 163 aa4.54□□□□□ -1.68
COL4A5-205ENST00000483338 A0A087WTM6 91 aa4.53□□□□□ -1.68
COL4A5-205ENST00000483338 SPINT4Q6UDR6 99 aa4.52□□□□□ -1.69
COL4A5-205ENST00000483338 Q6ZSA8 131 aa4.52□□□□□ -1.69
COL4A5-205ENST00000483338 SSBP3-AS1Q7Z2R9 100 aa4.52□□□□□ -1.69
COL4A5-205ENST00000483338 DNAH1Q9P2D7 4330 aa4.51□□□□□ -1.69
COL4A5-205ENST00000483338 MEGF8Q7Z7M0 2845 aa4.51□□□□□ -1.69
COL4A5-205ENST00000483338 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
COL4A5-205ENST00000483338 NUPR2A6NF83 97 aa4.5□□□□□ -1.69
COL4A5-205ENST00000483338 LY6G6CO95867 125 aa4.49□□□□□ -1.69
COL4A5-205ENST00000483338 PSORS1C2Q9UIG4 136 aa4.48□□□□□ -1.69
COL4A5-205ENST00000483338 ANAPC11Q9NYG5 84 aa4.48□□□□□ -1.69
COL4A5-205ENST00000483338 PANO1I0J062 215 aa4.48□□□□□ -1.69
COL4A5-205ENST00000483338 TGP01266 2768 aa4.47□□□□□ -1.69
COL4A5-205ENST00000483338 H3BNG1 76 aa4.47□□□□□ -1.69
COL4A5-205ENST00000483338 IGKV2-30P06310 120 aa4.47□□□□□ -1.69
COL4A5-205ENST00000483338 CIRBP-AS1Q8TBR5 109 aa4.45□□□□□ -1.7
COL4A5-205ENST00000483338 WWC2-AS2Q96NR7 200 aa4.45□□□□□ -1.7
COL4A5-205ENST00000483338 LYSTQ99698 3801 aa4.45□□□□□ -1.7
COL4A5-205ENST00000483338 SPINK1P00995 79 aa4.45□□□□□ -1.7
COL4A5-205ENST00000483338 DNAH10Q8IVF4 4471 aa4.44□□□□□ -1.7
COL4A5-205ENST00000483338 C14orf177Q52M58 125 aa4.43□□□□□ -1.7
COL4A5-205ENST00000483338 FAM229AH3BQW9 127 aa4.42□□□□□ -1.7
COL4A5-205ENST00000483338 TPRXLQ17RH7 258 aa4.42□□□□□ -1.7
COL4A5-205ENST00000483338 DNHD1Q96M86 4753 aa4.42□□□□□ -1.7
COL4A5-205ENST00000483338 KRTAP13-1Q8IUC0 172 aa4.41□□□□□ -1.7
COL4A5-205ENST00000483338 FRAS1Q86XX4 4008 aa4.41□□□□□ -1.7
COL4A5-205ENST00000483338 LUZP6Q538Z0 58 aa4.4□□□□□ -1.7
COL4A5-205ENST00000483338 TYMSOSQ8TAI1 123 aa4.4□□□□□ -1.7
COL4A5-205ENST00000483338 FBN3Q75N90 2809 aa4.4□□□□□ -1.71
COL4A5-205ENST00000483338 IGKV2D-30A0A075B6S6 120 aa4.4□□□□□ -1.71
COL4A5-205ENST00000483338 A0A1B0GU33 70 aa4.4□□□□□ -1.71
COL4A5-205ENST00000483338 KRTAP1-5Q9BYS1 174 aa4.39□□□□□ -1.71
COL4A5-205ENST00000483338 APLNQ9ULZ1 77 aa4.38□□□□□ -1.71
COL4A5-205ENST00000483338 H1FX-AS1Q4G0G2 97 aa4.36□□□□□ -1.71
COL4A5-205ENST00000483338 ANK2Q01484 3957 aa4.35□□□□□ -1.71
COL4A5-205ENST00000483338 K7ERS5 55 aa4.35□□□□□ -1.71
COL4A5-205ENST00000483338 C10orf95Q9H7T3 257 aa4.34□□□□□ -1.71
COL4A5-205ENST00000483338 NBDYA0A0U1RRE5 68 aa4.34□□□□□ -1.72
COL4A5-205ENST00000483338 Q8N1X5 172 aa4.34□□□□□ -1.72
COL4A5-205ENST00000483338 DMBT1Q9UGM3 2413 aaPredicted RBP4.34□□□□□ -1.72
COL4A5-205ENST00000483338 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.33□□□□□ -1.72
COL4A5-205ENST00000483338 SPACA4Q8TDM5 124 aa4.31□□□□□ -1.72
COL4A5-205ENST00000483338 DNAH8Q96JB1 4490 aa4.31□□□□□ -1.72
COL4A5-205ENST00000483338 DNAH9Q9NYC9 4486 aa4.3□□□□□ -1.72
COL4A5-205ENST00000483338 COX6B2Q6YFQ2 88 aa4.26□□□□□ -1.73
COL4A5-205ENST00000483338 DNAH17Q9UFH2 4485 aa4.26□□□□□ -1.73
COL4A5-205ENST00000483338 HUWE1Q7Z6Z7 4374 aaKnown RBP4.25□□□□□ -1.73
COL4A5-205ENST00000483338 CMYA5Q8N3K9 4069 aa4.24□□□□□ -1.73
COL4A5-205ENST00000483338 PRKDCP78527 4128 aaKnown RBP4.24□□□□□ -1.73
COL4A5-205ENST00000483338 RPL37P61927 97 aaKnown RBP4.22□□□□□ -1.73
COL4A5-205ENST00000483338 SEC61BP60468 96 aaKnown RBP4.21□□□□□ -1.74
COL4A5-205ENST00000483338 KRTAP3-1Q9BYR8 98 aa4.17□□□□□ -1.74
COL4A5-205ENST00000483338 DNAH3Q8TD57 4116 aa4.17□□□□□ -1.74
COL4A5-205ENST00000483338 SMR3BP02814 79 aaPredicted RBP4.16□□□□□ -1.74
COL4A5-205ENST00000483338 KMT2AQ03164 3969 aa4.16□□□□□ -1.74
COL4A5-205ENST00000483338 VPS13DQ5THJ4 4388 aa4.16□□□□□ -1.74
COL4A5-205ENST00000483338 A0A0D9SG42 100 aa4.16□□□□□ -1.74
COL4A5-205ENST00000483338 C9orf92A6NGG3 77 aa4.15□□□□□ -1.74
COL4A5-205ENST00000483338 KRTAP13-4Q3LI77 160 aa4.15□□□□□ -1.74
COL4A5-205ENST00000483338 Q6ZRN7 208 aaPredicted RBP4.14□□□□□ -1.75
COL4A5-205ENST00000483338 DNAH7Q8WXX0 4024 aa4.14□□□□□ -1.75
COL4A5-205ENST00000483338 KRTAP10-2P60368 255 aa4.13□□□□□ -1.75
COL4A5-205ENST00000483338 HECTD4Q9Y4D8 3996 aa4.12□□□□□ -1.75
COL4A5-205ENST00000483338 KRTAP10-6P60371 365 aaPredicted RBP4.09□□□□□ -1.76
COL4A5-205ENST00000483338 PLECQ15149 4684 aaKnown RBP4.08□□□□□ -1.76
COL4A5-205ENST00000483338 KRTAP3-2Q9BYR7 98 aa4.08□□□□□ -1.76
COL4A5-205ENST00000483338 S4R3F8 94 aa4.07□□□□□ -1.76
COL4A5-205ENST00000483338 STARD9Q9P2P6 4700 aa4.07□□□□□ -1.76
COL4A5-205ENST00000483338 KRTAP10-1P60331 282 aa4.07□□□□□ -1.76
COL4A5-205ENST00000483338 XP32Q5T750 250 aa4.06□□□□□ -1.76
COL4A5-205ENST00000483338 KRTAP12-2P59991 146 aa4.05□□□□□ -1.76
COL4A5-205ENST00000483338 KRTAP13-2Q52LG2 175 aa4.05□□□□□ -1.76
COL4A5-205ENST00000483338 PLAC4Q8WY50 150 aa4.02□□□□□ -1.77
COL4A5-205ENST00000483338 DNAH6Q9C0G6 4158 aa3.98□□□□□ -1.77
COL4A5-205ENST00000483338 A0A1B0GVY2 172 aa3.97□□□□□ -1.77
COL4A5-205ENST00000483338 DYNC2H1Q8NCM8 4307 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms