RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 RBM3P98179 157 aaKnown RBP7.18□□□□□ -1.26
COL21A1-209ENST00000482933 LINC00643Q86TS7 51 aa7.18□□□□□ -1.26
COL21A1-209ENST00000482933 IMUPQ9GZP8 106 aa7.18□□□□□ -1.26
COL21A1-209ENST00000482933 LAMTOR3Q9UHA4 124 aa7.18□□□□□ -1.26
COL21A1-209ENST00000482933 FAT4Q6V0I7 4981 aa7.18□□□□□ -1.26
COL21A1-209ENST00000482933 Q6Q795 121 aa7.18□□□□□ -1.26
COL21A1-209ENST00000482933 DSCR8Q96T75 97 aa7.18□□□□□ -1.26
COL21A1-209ENST00000482933 SPRR1BP22528 89 aa7.17□□□□□ -1.26
COL21A1-209ENST00000482933 CCKP06307 115 aa7.16□□□□□ -1.26
COL21A1-209ENST00000482933 Q6ZQY7 126 aa7.16□□□□□ -1.26
COL21A1-209ENST00000482933 LOC110117498A0A087WWA1 95 aa7.14□□□□□ -1.27
COL21A1-209ENST00000482933 SEC61BP60468 96 aaKnown RBP7.14□□□□□ -1.27
COL21A1-209ENST00000482933 ASB16-AS1Q495Z4 193 aa7.14□□□□□ -1.27
COL21A1-209ENST00000482933 LIMD2Q9BT23 127 aa7.13□□□□□ -1.27
COL21A1-209ENST00000482933 C14orf132Q9NPU4 83 aa7.13□□□□□ -1.27
COL21A1-209ENST00000482933 A0A1B0GW54 56 aa7.11□□□□□ -1.27
COL21A1-209ENST00000482933 ATP5EP2Q5VTU8 51 aa7.11□□□□□ -1.27
COL21A1-209ENST00000482933 UBL5Q9BZL1 73 aa7.11□□□□□ -1.27
COL21A1-209ENST00000482933 MT-ATP8P03928 68 aa7.1□□□□□ -1.27
COL21A1-209ENST00000482933 TRBV7-7A0A0K0K1E9 115 aa7.1□□□□□ -1.27
COL21A1-209ENST00000482933 NDUFV3P56181 108 aaKnown RBP7.1□□□□□ -1.27
COL21A1-209ENST00000482933 HRCT1Q6UXD1 115 aa7.1□□□□□ -1.27
COL21A1-209ENST00000482933 DEFB105AQ8NG35 78 aa7.1□□□□□ -1.27
COL21A1-209ENST00000482933 A0A1B0GV72 72 aa7.09□□□□□ -1.28
COL21A1-209ENST00000482933 CD164Q04900 197 aa7.08□□□□□ -1.28
COL21A1-209ENST00000482933 Q6JHZ5 121 aa7.06□□□□□ -1.28
COL21A1-209ENST00000482933 Q6ZQT0 140 aa7.06□□□□□ -1.28
COL21A1-209ENST00000482933 IGLV5-48A0A075B6I7 105 aa7.05□□□□□ -1.28
COL21A1-209ENST00000482933 F8WEM9 126 aa7.04□□□□□ -1.28
COL21A1-209ENST00000482933 SMIM29Q86T20 159 aa7.04□□□□□ -1.28
COL21A1-209ENST00000482933 TRBV7-4A0A0J9YYF1 115 aa7.03□□□□□ -1.28
COL21A1-209ENST00000482933 LINC01547P58512 204 aaPredicted RBP7.03□□□□□ -1.28
COL21A1-209ENST00000482933 LINC00846Q9NV44 126 aa7.02□□□□□ -1.29
COL21A1-209ENST00000482933 Q5XG85 94 aa7.01□□□□□ -1.29
COL21A1-209ENST00000482933 ANAPC13Q9BS18 74 aa7.01□□□□□ -1.29
COL21A1-209ENST00000482933 KRTAP4-1Q9BYQ7 146 aa7.01□□□□□ -1.29
COL21A1-209ENST00000482933 C9orf92A6NGG3 77 aa6.99□□□□□ -1.29
COL21A1-209ENST00000482933 CXCL6P80162 114 aa6.98□□□□□ -1.29
COL21A1-209ENST00000482933 A0A0G2JQZ4 141 aa6.95□□□□□ -1.3
COL21A1-209ENST00000482933 ATOX1O00244 68 aa6.95□□□□□ -1.3
COL21A1-209ENST00000482933 NREPQ16612 68 aa6.95□□□□□ -1.3
COL21A1-209ENST00000482933 C1orf195Q5TG92 126 aa6.95□□□□□ -1.3
COL21A1-209ENST00000482933 PCOTHQ58A44 107 aa6.94□□□□□ -1.3
COL21A1-209ENST00000482933 Q6ZVQ6 151 aa6.93□□□□□ -1.3
COL21A1-209ENST00000482933 IGLV8-61A0A075B6I0 122 aa6.93□□□□□ -1.3
COL21A1-209ENST00000482933 FAM236AA0A1B0GUQ0 79 aa6.93□□□□□ -1.3
COL21A1-209ENST00000482933 FAM236BA0A1B0GV22 79 aa6.93□□□□□ -1.3
COL21A1-209ENST00000482933 HIST1H4AP62805 103 aaKnown RBP6.93□□□□□ -1.3
COL21A1-209ENST00000482933 SMIM20Q8N5G0 67 aa6.93□□□□□ -1.3
COL21A1-209ENST00000482933 IGKV3D-7A0A0C4DH55 119 aa6.92□□□□□ -1.3
COL21A1-209ENST00000482933 BPY2O14599 106 aa6.87□□□□□ -1.31
COL21A1-209ENST00000482933 RPL37P61927 97 aaKnown RBP6.87□□□□□ -1.31
COL21A1-209ENST00000482933 IGFL1Q6UW32 110 aa6.87□□□□□ -1.31
COL21A1-209ENST00000482933 UQCRQO14949 82 aa6.85□□□□□ -1.31
COL21A1-209ENST00000482933 A0A1W2PNM2 257 aa6.84□□□□□ -1.31
COL21A1-209ENST00000482933 KRTAP19-2Q3LHN2 52 aa6.84□□□□□ -1.32
COL21A1-209ENST00000482933 SERP2Q8N6R1 65 aa6.83□□□□□ -1.32
COL21A1-209ENST00000482933 COX7CP15954 63 aa6.82□□□□□ -1.32
COL21A1-209ENST00000482933 MT1HP80294 61 aa6.8□□□□□ -1.32
COL21A1-209ENST00000482933 Q8N9P0 234 aaPredicted RBP6.8□□□□□ -1.32
COL21A1-209ENST00000482933 SS18L2Q9UHA2 77 aa6.8□□□□□ -1.32
COL21A1-209ENST00000482933 J3KT08 172 aa6.78□□□□□ -1.32
COL21A1-209ENST00000482933 A0A087WVE0 104 aa6.77□□□□□ -1.33
COL21A1-209ENST00000482933 TRAV7A0A075B6U4 112 aa6.76□□□□□ -1.33
COL21A1-209ENST00000482933 ATP11AUNQ6ZP68 121 aa6.76□□□□□ -1.33
COL21A1-209ENST00000482933 LCE1AQ5T7P2 110 aa6.75□□□□□ -1.33
COL21A1-209ENST00000482933 COX6B2Q6YFQ2 88 aa6.75□□□□□ -1.33
COL21A1-209ENST00000482933 Q75L30 129 aa6.75□□□□□ -1.33
COL21A1-209ENST00000482933 A0A087WSZ3 146 aa6.74□□□□□ -1.33
COL21A1-209ENST00000482933 NDUFB1O75438 58 aa6.73□□□□□ -1.33
COL21A1-209ENST00000482933 CCDC179H3BU77 68 aa6.72□□□□□ -1.33
COL21A1-209ENST00000482933 M0R2T5 61 aa6.71□□□□□ -1.34
COL21A1-209ENST00000482933 IGKV4-1P06312 121 aa6.71□□□□□ -1.34
COL21A1-209ENST00000482933 Q96NJ1 140 aa6.71□□□□□ -1.34
COL21A1-209ENST00000482933 NDUFC1O43677 76 aa6.69□□□□□ -1.34
COL21A1-209ENST00000482933 KRTAP10-6P60371 365 aaPredicted RBP6.68□□□□□ -1.34
COL21A1-209ENST00000482933 A8MWP4 228 aa6.67□□□□□ -1.34
COL21A1-209ENST00000482933 HCG22E2RYF7 251 aa6.67□□□□□ -1.34
COL21A1-209ENST00000482933 C20orf166-AS1Q96NR2 134 aa6.67□□□□□ -1.34
COL21A1-209ENST00000482933 LINC00472Q9H8W2 130 aa6.67□□□□□ -1.34
COL21A1-209ENST00000482933 DSCR10P59022 87 aa6.66□□□□□ -1.34
COL21A1-209ENST00000482933 FLGP20930 4061 aaPredicted RBP6.65□□□□□ -1.34
COL21A1-209ENST00000482933 IGKV2-30P06310 120 aa6.65□□□□□ -1.35
COL21A1-209ENST00000482933 TMEM258P61165 79 aa6.65□□□□□ -1.35
COL21A1-209ENST00000482933 A8MUU9 505 aa6.64□□□□□ -1.35
COL21A1-209ENST00000482933 PRR15Q8IV56 129 aa6.64□□□□□ -1.35
COL21A1-209ENST00000482933 CRCT1Q9UGL9 99 aa6.64□□□□□ -1.35
COL21A1-209ENST00000482933 FSIP2Q5CZC0 6907 aa6.63□□□□□ -1.35
COL21A1-209ENST00000482933 K7EQZ3 153 aa6.63□□□□□ -1.35
COL21A1-209ENST00000482933 KLKP1Q107X0 134 aa6.63□□□□□ -1.35
COL21A1-209ENST00000482933 Q8N9L7 120 aa6.63□□□□□ -1.35
COL21A1-209ENST00000482933 C5orf47Q569G3 176 aa6.62□□□□□ -1.35
COL21A1-209ENST00000482933 C20orf197Q8N268 126 aa6.61□□□□□ -1.35
COL21A1-209ENST00000482933 ATP5EP56381 51 aaPredicted RBP6.59□□□□□ -1.35
COL21A1-209ENST00000482933 OCR1Q9BZK8 76 aa6.59□□□□□ -1.35
COL21A1-209ENST00000482933 MP68P56378 58 aa6.59□□□□□ -1.36
COL21A1-209ENST00000482933 LINC00313P59037 77 aa6.59□□□□□ -1.36
COL21A1-209ENST00000482933 CASC2Q6XLA1 102 aa6.59□□□□□ -1.36
COL21A1-209ENST00000482933 H3BPC8 53 aa6.58□□□□□ -1.36
COL21A1-209ENST00000482933 DEFB116Q30KQ4 102 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms