RNA–Protein interactions for RNA: ENST00000478888.1

GKN1-202, Transcript of gastrokine 1, humanhuman

TSL 2

Gene GKN1, Length 581 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GKN1-202ENST00000478888 MTORP42345 2549 aa0.27□□□□□ -2.37
GKN1-202ENST00000478888 NSD1Q96L73 2696 aaPredicted RBP0.27□□□□□ -2.37
GKN1-202ENST00000478888 ACACAQ13085 2346 aa0.27□□□□□ -2.37
GKN1-202ENST00000478888 FLNCQ14315 2725 aa0.27□□□□□ -2.37
GKN1-202ENST00000478888 FAM208AQ9UK61 1670 aaKnown RBP0.27□□□□□ -2.37
GKN1-202ENST00000478888 SETD2Q9BYW2 2564 aaPredicted RBP0.26□□□□□ -2.37
GKN1-202ENST00000478888 KMT2DO14686 5537 aa0.26□□□□□ -2.37
GKN1-202ENST00000478888 FSIP2Q5CZC0 6907 aa0.25□□□□□ -2.37
GKN1-202ENST00000478888 SMIM27A0A1W2PRY6 76 aa0.25□□□□□ -2.37
GKN1-202ENST00000478888 PHGR1C9JFL3 82 aa0.25□□□□□ -2.37
GKN1-202ENST00000478888 MDN1Q9NU22 5596 aa0.25□□□□□ -2.37
GKN1-202ENST00000478888 NF1P21359 2839 aa0.25□□□□□ -2.37
GKN1-202ENST00000478888 IQGAP2Q13576 1575 aa0.24□□□□□ -2.37
GKN1-202ENST00000478888 H3BNG1 76 aa0.24□□□□□ -2.37
GKN1-202ENST00000478888 LYSTQ99698 3801 aa0.24□□□□□ -2.37
GKN1-202ENST00000478888 GCN1Q92616 2671 aaKnown RBP0.24□□□□□ -2.37
GKN1-202ENST00000478888 ZZEF1O43149 2961 aa0.24□□□□□ -2.37
GKN1-202ENST00000478888 KIF21BO75037 1637 aa0.24□□□□□ -2.37
GKN1-202ENST00000478888 SPRR2BP35325 72 aa0.23□□□□□ -2.37
GKN1-202ENST00000478888 NOP10Q9NPE3 64 aaKnown RBP0.23□□□□□ -2.37
GKN1-202ENST00000478888 KAAG1Q9UBP8 84 aa0.23□□□□□ -2.37
GKN1-202ENST00000478888 EPG5Q9HCE0 2579 aa0.23□□□□□ -2.37
GKN1-202ENST00000478888 COL7A1Q02388 2944 aa0.23□□□□□ -2.37
GKN1-202ENST00000478888 RIF1Q5UIP0 2472 aaKnown RBP0.23□□□□□ -2.37
GKN1-202ENST00000478888 CCDC168Q8NDH2 2452 aa0.23□□□□□ -2.37
GKN1-202ENST00000478888 SRRM2Q9UQ35 2752 aaKnown RBP0.23□□□□□ -2.37
GKN1-202ENST00000478888 HMCN2Q8NDA2 5059 aa0.22□□□□□ -2.37
GKN1-202ENST00000478888 C9orf92A6NGG3 77 aa0.22□□□□□ -2.37
GKN1-202ENST00000478888 WFDC10BQ8IUB3 73 aa0.22□□□□□ -2.37
GKN1-202ENST00000478888 ZANQ9Y493 2812 aa0.21□□□□□ -2.38
GKN1-202ENST00000478888 ANKHD1Q8IWZ3 2542 aaKnown RBP0.21□□□□□ -2.38
GKN1-202ENST00000478888 LPAP08519 4548 aa0.21□□□□□ -2.38
GKN1-202ENST00000478888 SONP18583 2426 aaKnown RBP0.21□□□□□ -2.38
GKN1-202ENST00000478888 STAB2Q8WWQ8 2551 aa0.21□□□□□ -2.38
GKN1-202ENST00000478888 TENM2Q9NT68 2774 aa0.21□□□□□ -2.38
GKN1-202ENST00000478888 IGLV5-48A0A075B6I7 105 aa0.2□□□□□ -2.38
GKN1-202ENST00000478888 TFF3Q07654 80 aa0.2□□□□□ -2.38
GKN1-202ENST00000478888 CLTCL1P53675 1640 aa0.2□□□□□ -2.38
GKN1-202ENST00000478888 HECTD4Q9Y4D8 3996 aa0.2□□□□□ -2.38
GKN1-202ENST00000478888 TOMM5Q8N4H5 51 aa0.19□□□□□ -2.38
GKN1-202ENST00000478888 FASNP49327 2511 aaKnown RBP0.19□□□□□ -2.38
GKN1-202ENST00000478888 LINC01546A6NGU7 62 aa0.18□□□□□ -2.38
GKN1-202ENST00000478888 SMIM2Q9BVW6 85 aa0.18□□□□□ -2.38
GKN1-202ENST00000478888 COL6A3P12111 3177 aa0.18□□□□□ -2.38
GKN1-202ENST00000478888 DSTQ03001 7570 aaKnown RBP0.18□□□□□ -2.38
GKN1-202ENST00000478888 M0QY20 66 aa0.17□□□□□ -2.38
GKN1-202ENST00000478888 DMXL1Q9Y485 3027 aa0.17□□□□□ -2.38
GKN1-202ENST00000478888 NFAT5O94916 1531 aa0.17□□□□□ -2.38
GKN1-202ENST00000478888 PDZD2O15018 2839 aa0.17□□□□□ -2.38
GKN1-202ENST00000478888 NBEAL1Q6ZS30 2694 aa0.17□□□□□ -2.38
GKN1-202ENST00000478888 TGP01266 2768 aa0.17□□□□□ -2.38
GKN1-202ENST00000478888 COL6A5A8TX70 2615 aa0.17□□□□□ -2.38
GKN1-202ENST00000478888 ACACBO00763 2458 aa0.16□□□□□ -2.38
GKN1-202ENST00000478888 UTP20O75691 2785 aaKnown RBP0.16□□□□□ -2.38
GKN1-202ENST00000478888 NBEAL2Q6ZNJ1 2754 aa0.16□□□□□ -2.38
GKN1-202ENST00000478888 HSPG2P98160 4391 aa0.16□□□□□ -2.38
GKN1-202ENST00000478888 MMP24-AS1A0A0U1RRL7 71 aa0.16□□□□□ -2.38
GKN1-202ENST00000478888 DEFB110Q30KQ9 67 aa0.16□□□□□ -2.38
GKN1-202ENST00000478888 MAP1AP78559 2803 aaPredicted RBP0.16□□□□□ -2.38
GKN1-202ENST00000478888 ANKRD11Q6UB99 2663 aaPredicted RBP0.16□□□□□ -2.38
GKN1-202ENST00000478888 STAB1Q9NY15 2570 aa0.15□□□□□ -2.38
GKN1-202ENST00000478888 VPS13BQ7Z7G8 4022 aa0.15□□□□□ -2.39
GKN1-202ENST00000478888 PKD1P98161 4303 aa0.15□□□□□ -2.39
GKN1-202ENST00000478888 SPRR2AP35326 72 aa0.15□□□□□ -2.39
GKN1-202ENST00000478888 MYO18BQ8IUG5 2567 aa0.15□□□□□ -2.39
GKN1-202ENST00000478888 TEP1Q99973 2627 aaKnown RBP0.15□□□□□ -2.39
GKN1-202ENST00000478888 TLN2Q9Y4G6 2542 aa0.14□□□□□ -2.39
GKN1-202ENST00000478888 DEFB131AP59861 70 aa0.14□□□□□ -2.39
GKN1-202ENST00000478888 SPRR2GQ9BYE4 73 aa0.14□□□□□ -2.39
GKN1-202ENST00000478888 SSPOA2VEC9 5147 aa0.14□□□□□ -2.39
GKN1-202ENST00000478888 A0A0C4DFX4 3053 aa0.13□□□□□ -2.39
GKN1-202ENST00000478888 HIVEP1P15822 2718 aa0.13□□□□□ -2.39
GKN1-202ENST00000478888 TNP1P09430 55 aa0.13□□□□□ -2.39
GKN1-202ENST00000478888 KRTAP6-2Q3LI66 62 aa0.13□□□□□ -2.39
GKN1-202ENST00000478888 NBEAQ8NFP9 2946 aa0.13□□□□□ -2.39
GKN1-202ENST00000478888 TRPM2O94759 1503 aa0.13□□□□□ -2.39
GKN1-202ENST00000478888 FLGP20930 4061 aaPredicted RBP0.13□□□□□ -2.39
GKN1-202ENST00000478888 TACC2O95359 2948 aa0.12□□□□□ -2.39
GKN1-202ENST00000478888 A8MTW9 85 aa0.12□□□□□ -2.39
GKN1-202ENST00000478888 NDUFA1O15239 70 aa0.12□□□□□ -2.39
GKN1-202ENST00000478888 PKHD1P08F94 4074 aa0.12□□□□□ -2.39
GKN1-202ENST00000478888 NEBP20929 6669 aa0.12□□□□□ -2.39
GKN1-202ENST00000478888 LRP1BQ9NZR2 4599 aa0.12□□□□□ -2.39
GKN1-202ENST00000478888 SVEP1Q4LDE5 3571 aa0.11□□□□□ -2.39
GKN1-202ENST00000478888 LRP2P98164 4655 aa0.11□□□□□ -2.39
GKN1-202ENST00000478888 USP9XQ93008 2570 aaPredicted RBP0.1□□□□□ -2.39
GKN1-202ENST00000478888 AKAP9Q99996 3911 aa0.1□□□□□ -2.39
GKN1-202ENST00000478888 CUBNO60494 3623 aa0.1□□□□□ -2.39
GKN1-202ENST00000478888 MGAM2Q2M2H8 2515 aa0.1□□□□□ -2.39
GKN1-202ENST00000478888 M0QZ58 72 aa0.1□□□□□ -2.39
GKN1-202ENST00000478888 MXRA5Q9NR99 2828 aa0.1□□□□□ -2.39
GKN1-202ENST00000478888 KALRNO60229 2985 aa0.09□□□□□ -2.39
GKN1-202ENST00000478888 COL12A1Q99715 3063 aa0.09□□□□□ -2.39
GKN1-202ENST00000478888 SPRR2EP22531 72 aa0.09□□□□□ -2.4
GKN1-202ENST00000478888 ATP7AQ04656 1500 aa0.08□□□□□ -2.4
GKN1-202ENST00000478888 DNAH3Q8TD57 4116 aa0.08□□□□□ -2.4
GKN1-202ENST00000478888 HTTP42858 3142 aa0.08□□□□□ -2.4
GKN1-202ENST00000478888 SACSQ9NZJ4 4579 aa0.07□□□□□ -2.4
GKN1-202ENST00000478888 MT1AP04731 61 aa0.07□□□□□ -2.4
GKN1-202ENST00000478888 DNAH9Q9NYC9 4486 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms