RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 C3orf22Q8N5N4 141 aa2.01□□□□□ -2.09
UBR3-209ENST00000477461 ANKRD29Q8N6D5 301 aa2.01□□□□□ -2.09
UBR3-209ENST00000477461 A0A1B0GV72 72 aa2□□□□□ -2.09
UBR3-209ENST00000477461 F8W1H4 67 aa2□□□□□ -2.09
UBR3-209ENST00000477461 JMJD7-PLA2G4BH0Y9G9 81 aa2□□□□□ -2.09
UBR3-209ENST00000477461 RBM3P98179 157 aaKnown RBP2□□□□□ -2.09
UBR3-209ENST00000477461 Q6JHZ5 121 aa2□□□□□ -2.09
UBR3-209ENST00000477461 SSBP3-AS1Q7Z2R9 100 aa2□□□□□ -2.09
UBR3-209ENST00000477461 LINC01600Q96MT4 127 aa2□□□□□ -2.09
UBR3-209ENST00000477461 FRAS1Q86XX4 4008 aa1.99□□□□□ -2.09
UBR3-209ENST00000477461 DNAH17Q9UFH2 4485 aa1.99□□□□□ -2.09
UBR3-209ENST00000477461 LINC00304Q8N9R0 145 aa1.99□□□□□ -2.09
UBR3-209ENST00000477461 DSCR8Q96T75 97 aa1.99□□□□□ -2.09
UBR3-209ENST00000477461 VPS25Q9BRG1 176 aa1.99□□□□□ -2.09
UBR3-209ENST00000477461 RYR2Q92736 4967 aa1.99□□□□□ -2.09
UBR3-209ENST00000477461 FLG2Q5D862 2391 aaPredicted RBP1.99□□□□□ -2.09
UBR3-209ENST00000477461 HYDINQ4G0P3 5121 aa1.99□□□□□ -2.09
UBR3-209ENST00000477461 KMT2CQ8NEZ4 4911 aaKnown RBP1.98□□□□□ -2.09
UBR3-209ENST00000477461 PDE6GP18545 87 aa1.98□□□□□ -2.09
UBR3-209ENST00000477461 SPAG11AQ6PDA7 123 aa1.98□□□□□ -2.09
UBR3-209ENST00000477461 HRCT1Q6UXD1 115 aa1.98□□□□□ -2.09
UBR3-209ENST00000477461 C14orf132Q9NPU4 83 aa1.98□□□□□ -2.09
UBR3-209ENST00000477461 DNAH10Q8IVF4 4471 aa1.97□□□□□ -2.09
UBR3-209ENST00000477461 SACSQ9NZJ4 4579 aa1.97□□□□□ -2.09
UBR3-209ENST00000477461 TRBV7-4A0A0J9YYF1 115 aa1.97□□□□□ -2.09
UBR3-209ENST00000477461 SPINK1P00995 79 aa1.97□□□□□ -2.09
UBR3-209ENST00000477461 CCKP06307 115 aa1.97□□□□□ -2.09
UBR3-209ENST00000477461 CD164Q04900 197 aa1.97□□□□□ -2.09
UBR3-209ENST00000477461 ETDBQ3ZM63 59 aa1.97□□□□□ -2.09
UBR3-209ENST00000477461 TEN1Q86WV5 123 aa1.97□□□□□ -2.09
UBR3-209ENST00000477461 LIMD2Q9BT23 127 aa1.97□□□□□ -2.09
UBR3-209ENST00000477461 HECTD4Q9Y4D8 3996 aa1.97□□□□□ -2.09
UBR3-209ENST00000477461 PKD1P98161 4303 aa1.96□□□□□ -2.1
UBR3-209ENST00000477461 LOC110117498A0A087WWA1 95 aa1.96□□□□□ -2.1
UBR3-209ENST00000477461 A0A0G2JQZ4 141 aa1.96□□□□□ -2.1
UBR3-209ENST00000477461 TRBV7-7A0A0K0K1E9 115 aa1.96□□□□□ -2.1
UBR3-209ENST00000477461 A8MUU9 505 aa1.96□□□□□ -2.1
UBR3-209ENST00000477461 OBSCN-AS1Q96MR7 158 aa1.96□□□□□ -2.1
UBR3-209ENST00000477461 SS18L2Q9UHA2 77 aa1.96□□□□□ -2.1
UBR3-209ENST00000477461 DNAH2Q9P225 4427 aa1.96□□□□□ -2.1
UBR3-209ENST00000477461 A0A087WSZ3 146 aa1.95□□□□□ -2.1
UBR3-209ENST00000477461 A0A1B0GW54 56 aa1.95□□□□□ -2.1
UBR3-209ENST00000477461 A0A1W2PNM2 257 aa1.95□□□□□ -2.1
UBR3-209ENST00000477461 J3QR89 54 aa1.95□□□□□ -2.1
UBR3-209ENST00000477461 MT1HL1P0DM35 61 aa1.95□□□□□ -2.1
UBR3-209ENST00000477461 RPS29P62273 56 aaKnown RBP1.95□□□□□ -2.1
UBR3-209ENST00000477461 Q6Q795 121 aa1.95□□□□□ -2.1
UBR3-209ENST00000477461 Q6ZQT0 140 aa1.95□□□□□ -2.1
UBR3-209ENST00000477461 FAT2Q9NYQ8 4349 aa1.95□□□□□ -2.1
UBR3-209ENST00000477461 DMBT1Q9UGM3 2413 aaPredicted RBP1.94□□□□□ -2.1
UBR3-209ENST00000477461 DNAH11Q96DT5 4516 aa1.93□□□□□ -2.1
UBR3-209ENST00000477461 ACYP1P07311 99 aa1.93□□□□□ -2.1
UBR3-209ENST00000477461 NREPQ16612 68 aa1.93□□□□□ -2.1
UBR3-209ENST00000477461 Q5XG85 94 aa1.93□□□□□ -2.1
UBR3-209ENST00000477461 UBL5Q9BZL1 73 aa1.93□□□□□ -2.1
UBR3-209ENST00000477461 RYR3Q15413 4870 aa1.93□□□□□ -2.1
UBR3-209ENST00000477461 SRRM2Q9UQ35 2752 aaKnown RBP1.92□□□□□ -2.1
UBR3-209ENST00000477461 SMIM26A0A096LP01 95 aa1.92□□□□□ -2.1
UBR3-209ENST00000477461 K7ERU9 68 aa1.92□□□□□ -2.1
UBR3-209ENST00000477461 IGKV4-1P06312 121 aa1.92□□□□□ -2.1
UBR3-209ENST00000477461 KRTAP12-4P60329 112 aa1.92□□□□□ -2.1
UBR3-209ENST00000477461 ASB16-AS1Q495Z4 193 aa1.92□□□□□ -2.1
UBR3-209ENST00000477461 SPANXA2-OT1Q8N9U9 137 aa1.92□□□□□ -2.1
UBR3-209ENST00000477461 SIGMAR1Q99720 223 aa1.92□□□□□ -2.1
UBR3-209ENST00000477461 RETNLBQ9BQ08 111 aa1.92□□□□□ -2.1
UBR3-209ENST00000477461 PKHD1P08F94 4074 aa1.91□□□□□ -2.1
UBR3-209ENST00000477461 DYNC1H1Q14204 4646 aaKnown RBP1.91□□□□□ -2.1
UBR3-209ENST00000477461 DNAH5Q8TE73 4624 aa1.91□□□□□ -2.1
UBR3-209ENST00000477461 LRP1BQ9NZR2 4599 aa1.91□□□□□ -2.1
UBR3-209ENST00000477461 FAM240AA0A1B0GVK7 77 aa1.91□□□□□ -2.1
UBR3-209ENST00000477461 J3KT08 172 aa1.91□□□□□ -2.1
UBR3-209ENST00000477461 NDUFB1O75438 58 aa1.91□□□□□ -2.1
UBR3-209ENST00000477461 KRTAP12-3P60328 96 aa1.91□□□□□ -2.1
UBR3-209ENST00000477461 C1orf195Q5TG92 126 aa1.91□□□□□ -2.1
UBR3-209ENST00000477461 FP248Q71RG6 208 aaPredicted RBP1.91□□□□□ -2.1
UBR3-209ENST00000477461 C8orf17Q9NRJ1 99 aa1.91□□□□□ -2.1
UBR3-209ENST00000477461 LINC00846Q9NV44 126 aa1.91□□□□□ -2.1
UBR3-209ENST00000477461 LINC00472Q9H8W2 130 aa1.9□□□□□ -2.11
UBR3-209ENST00000477461 DNAH8Q96JB1 4490 aa1.9□□□□□ -2.11
UBR3-209ENST00000477461 IGHV6-1A0A0B4J1U7 121 aa1.89□□□□□ -2.11
UBR3-209ENST00000477461 ATP5EP2Q5VTU8 51 aa1.89□□□□□ -2.11
UBR3-209ENST00000477461 Q96NJ1 140 aa1.89□□□□□ -2.11
UBR3-209ENST00000477461 KIAA1109Q2LD37 5005 aa1.88□□□□□ -2.11
UBR3-209ENST00000477461 BIRC6Q9NR09 4857 aa1.88□□□□□ -2.11
UBR3-209ENST00000477461 IGKV3D-7A0A0C4DH55 119 aa1.88□□□□□ -2.11
UBR3-209ENST00000477461 C9orf92A6NGG3 77 aa1.88□□□□□ -2.11
UBR3-209ENST00000477461 A8MWP4 228 aa1.88□□□□□ -2.11
UBR3-209ENST00000477461 C8orf87E5RJ46 101 aa1.88□□□□□ -2.11
UBR3-209ENST00000477461 LINC00313P59037 77 aa1.88□□□□□ -2.11
UBR3-209ENST00000477461 LINC00643Q86TS7 51 aa1.88□□□□□ -2.11
UBR3-209ENST00000477461 EPPK1P58107 5090 aaKnown RBP1.88□□□□□ -2.11
UBR3-209ENST00000477461 APOBP04114 4563 aaKnown RBP1.88□□□□□ -2.11
UBR3-209ENST00000477461 K7EQZ3 153 aa1.87□□□□□ -2.11
UBR3-209ENST00000477461 RYR1P21817 5038 aa1.87□□□□□ -2.11
UBR3-209ENST00000477461 HIST1H4AP62805 103 aaKnown RBP1.87□□□□□ -2.11
UBR3-209ENST00000477461 TPRXLQ17RH7 258 aa1.87□□□□□ -2.11
UBR3-209ENST00000477461 PRR15Q8IV56 129 aa1.87□□□□□ -2.11
UBR3-209ENST00000477461 HSPG2P98160 4391 aa1.87□□□□□ -2.11
UBR3-209ENST00000477461 VPS13BQ7Z7G8 4022 aa1.86□□□□□ -2.11
UBR3-209ENST00000477461 WFDC13Q8IUB5 93 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 251.1 ms