RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 IGKV2D-40P01614 121 aaPredicted RBP2.01□□□□□ -2.09
ITGA4-208ENST00000476824 HAMPP81172 84 aa2.01□□□□□ -2.09
ITGA4-208ENST00000476824 LY6EQ16553 131 aa2.01□□□□□ -2.09
ITGA4-208ENST00000476824 HECTD4Q9Y4D8 3996 aa2.01□□□□□ -2.09
ITGA4-208ENST00000476824 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
ITGA4-208ENST00000476824 TRGV2A0A075B6R0 118 aa1.99□□□□□ -2.09
ITGA4-208ENST00000476824 ETDCA0A1B0GVM5 59 aa1.99□□□□□ -2.09
ITGA4-208ENST00000476824 A0A1W2PNN7 141 aa1.99□□□□□ -2.09
ITGA4-208ENST00000476824 KCNQ1DNQ9H478 68 aa1.99□□□□□ -2.09
ITGA4-208ENST00000476824 TNCP24821 2201 aa1.98□□□□□ -2.09
ITGA4-208ENST00000476824 A0A087WTM6 91 aa1.98□□□□□ -2.09
ITGA4-208ENST00000476824 LINC00959A0A1B0GUT2 108 aa1.98□□□□□ -2.09
ITGA4-208ENST00000476824 RPL38P63173 70 aaKnown RBP1.98□□□□□ -2.09
ITGA4-208ENST00000476824 COA5Q86WW8 74 aa1.98□□□□□ -2.09
ITGA4-208ENST00000476824 CADP27708 2225 aa1.98□□□□□ -2.09
ITGA4-208ENST00000476824 STAB2Q8WWQ8 2551 aa1.97□□□□□ -2.09
ITGA4-208ENST00000476824 TRGV1A0A0A0MS02 117 aa1.97□□□□□ -2.09
ITGA4-208ENST00000476824 NBDYA0A0U1RRE5 68 aa1.97□□□□□ -2.09
ITGA4-208ENST00000476824 LINC00472Q9H8W2 130 aa1.97□□□□□ -2.09
ITGA4-208ENST00000476824 TENM2Q9NT68 2774 aa1.97□□□□□ -2.09
ITGA4-208ENST00000476824 ALPK2Q86TB3 2170 aa1.96□□□□□ -2.1
ITGA4-208ENST00000476824 PLCE1Q9P212 2302 aa1.96□□□□□ -2.1
ITGA4-208ENST00000476824 A0A1B0GU69 56 aa1.96□□□□□ -2.1
ITGA4-208ENST00000476824 HRES1P13985 223 aa1.96□□□□□ -2.1
ITGA4-208ENST00000476824 COX7BP24311 80 aa1.96□□□□□ -2.1
ITGA4-208ENST00000476824 RPL37AP61513 92 aaKnown RBP1.96□□□□□ -2.1
ITGA4-208ENST00000476824 C5orf56Q8N8D9 126 aa1.96□□□□□ -2.1
ITGA4-208ENST00000476824 DNAH10Q8IVF4 4471 aa1.95□□□□□ -2.1
ITGA4-208ENST00000476824 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.95□□□□□ -2.1
ITGA4-208ENST00000476824 IGKV2-29A2NJV5 120 aaPredicted RBP1.95□□□□□ -2.1
ITGA4-208ENST00000476824 CPSF4LA6NMK7 179 aaKnown RBP1.95□□□□□ -2.1
ITGA4-208ENST00000476824 NCR3O14931 201 aa1.95□□□□□ -2.1
ITGA4-208ENST00000476824 MRPL33O75394 65 aaKnown RBP1.95□□□□□ -2.1
ITGA4-208ENST00000476824 RPS27LQ71UM5 84 aaKnown RBP1.95□□□□□ -2.1
ITGA4-208ENST00000476824 Q96NJ1 140 aa1.95□□□□□ -2.1
ITGA4-208ENST00000476824 SMIM2Q9BVW6 85 aa1.95□□□□□ -2.1
ITGA4-208ENST00000476824 HUWE1Q7Z6Z7 4374 aaKnown RBP1.95□□□□□ -2.1
ITGA4-208ENST00000476824 IGLV4-60A0A075B6I1 120 aa1.94□□□□□ -2.1
ITGA4-208ENST00000476824 A0A096LNT2 108 aa1.94□□□□□ -2.1
ITGA4-208ENST00000476824 A0A0G2JQZ4 141 aa1.94□□□□□ -2.1
ITGA4-208ENST00000476824 IGKV4-1P06312 121 aa1.94□□□□□ -2.1
ITGA4-208ENST00000476824 IAPPP10997 89 aa1.94□□□□□ -2.1
ITGA4-208ENST00000476824 FXYD4P59646 89 aa1.94□□□□□ -2.1
ITGA4-208ENST00000476824 ARHGAP5-AS1Q96IT6 56 aa1.94□□□□□ -2.1
ITGA4-208ENST00000476824 CNFNQ9BYD5 112 aa1.94□□□□□ -2.1
ITGA4-208ENST00000476824 KMT2AQ03164 3969 aa1.93□□□□□ -2.1
ITGA4-208ENST00000476824 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
ITGA4-208ENST00000476824 C10orf55Q5SWW7 151 aa1.93□□□□□ -2.1
ITGA4-208ENST00000476824 COX14Q96I36 57 aa1.93□□□□□ -2.1
ITGA4-208ENST00000476824 DYNC1H1Q14204 4646 aaKnown RBP1.93□□□□□ -2.1
ITGA4-208ENST00000476824 ACYP2P14621 99 aa1.92□□□□□ -2.1
ITGA4-208ENST00000476824 DEFB134Q4QY38 66 aa1.92□□□□□ -2.1
ITGA4-208ENST00000476824 LINC00308Q8TCZ7 52 aa1.92□□□□□ -2.1
ITGA4-208ENST00000476824 PKHD1P08F94 4074 aa1.91□□□□□ -2.1
ITGA4-208ENST00000476824 DEFB131BA0A096LNP1 70 aa1.91□□□□□ -2.1
ITGA4-208ENST00000476824 INE1O15225 51 aa1.91□□□□□ -2.1
ITGA4-208ENST00000476824 IGLV6-57P01721 117 aa1.91□□□□□ -2.1
ITGA4-208ENST00000476824 TPRXLQ17RH7 258 aa1.91□□□□□ -2.1
ITGA4-208ENST00000476824 LINC00304Q8N9R0 145 aa1.91□□□□□ -2.1
ITGA4-208ENST00000476824 DNAH11Q96DT5 4516 aa1.91□□□□□ -2.1
ITGA4-208ENST00000476824 M0R2N4 97 aa1.9□□□□□ -2.11
ITGA4-208ENST00000476824 NDUFA1O15239 70 aa1.9□□□□□ -2.11
ITGA4-208ENST00000476824 LINC01590Q5TEZ4 76 aa1.9□□□□□ -2.11
ITGA4-208ENST00000476824 Q6ZQY7 126 aa1.9□□□□□ -2.11
ITGA4-208ENST00000476824 FAT2Q9NYQ8 4349 aa1.89□□□□□ -2.11
ITGA4-208ENST00000476824 ALMS1Q8TCU4 4167 aa1.89□□□□□ -2.11
ITGA4-208ENST00000476824 DEFB108AA8MXU0 73 aa1.89□□□□□ -2.11
ITGA4-208ENST00000476824 H3BRN7 92 aa1.89□□□□□ -2.11
ITGA4-208ENST00000476824 CRIP1P50238 77 aa1.89□□□□□ -2.11
ITGA4-208ENST00000476824 LINC00158P58513 81 aa1.89□□□□□ -2.11
ITGA4-208ENST00000476824 DEFB106AQ8N104 65 aa1.89□□□□□ -2.11
ITGA4-208ENST00000476824 SPACA4Q8TDM5 124 aa1.89□□□□□ -2.11
ITGA4-208ENST00000476824 WNK2Q9Y3S1 2297 aa1.89□□□□□ -2.11
ITGA4-208ENST00000476824 DNAH2Q9P225 4427 aa1.89□□□□□ -2.11
ITGA4-208ENST00000476824 VPS13DQ5THJ4 4388 aa1.89□□□□□ -2.11
ITGA4-208ENST00000476824 STATHP02808 62 aa1.88□□□□□ -2.11
ITGA4-208ENST00000476824 IGFL1Q6UW32 110 aa1.88□□□□□ -2.11
ITGA4-208ENST00000476824 HMCN2Q8NDA2 5059 aa1.87□□□□□ -2.11
ITGA4-208ENST00000476824 HSPG2P98160 4391 aa1.87□□□□□ -2.11
ITGA4-208ENST00000476824 APOBP04114 4563 aaKnown RBP1.87□□□□□ -2.11
ITGA4-208ENST00000476824 SMIM11BQ8TCY0 68 aa1.87□□□□□ -2.11
ITGA4-208ENST00000476824 CCL19Q99731 98 aa1.87□□□□□ -2.11
ITGA4-208ENST00000476824 TTTY10Q9BZA0 68 aa1.87□□□□□ -2.11
ITGA4-208ENST00000476824 DNAH17Q9UFH2 4485 aa1.87□□□□□ -2.11
ITGA4-208ENST00000476824 MYCBP2O75592 4640 aa1.87□□□□□ -2.11
ITGA4-208ENST00000476824 LY6G6CO95867 125 aa1.86□□□□□ -2.11
ITGA4-208ENST00000476824 DEFB110Q30KQ9 67 aa1.86□□□□□ -2.11
ITGA4-208ENST00000476824 KRTAP13-2Q52LG2 175 aa1.86□□□□□ -2.11
ITGA4-208ENST00000476824 SSBP3-AS1Q7Z2R9 100 aa1.86□□□□□ -2.11
ITGA4-208ENST00000476824 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.85□□□□□ -2.11
ITGA4-208ENST00000476824 Q8IZM0 81 aa1.85□□□□□ -2.11
ITGA4-208ENST00000476824 PLAC4Q8WY50 150 aa1.85□□□□□ -2.11
ITGA4-208ENST00000476824 CDKN2A-AS1Q9UH64 79 aa1.85□□□□□ -2.11
ITGA4-208ENST00000476824 DNAH6Q9C0G6 4158 aa1.84□□□□□ -2.11
ITGA4-208ENST00000476824 PKD1P98161 4303 aa1.84□□□□□ -2.11
ITGA4-208ENST00000476824 ANGP03950 147 aaKnown RBP1.84□□□□□ -2.11
ITGA4-208ENST00000476824 Q6ZRX8 168 aa1.84□□□□□ -2.11
ITGA4-208ENST00000476824 LRP1BQ9NZR2 4599 aa1.84□□□□□ -2.11
ITGA4-208ENST00000476824 DNAH5Q8TE73 4624 aa1.83□□□□□ -2.12
ITGA4-208ENST00000476824 C10orf99Q6UWK7 81 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms