RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 LOC400499M0QZD8 3231 aa2.29□□□□□ -2.04
CD55-208ENST00000476590 PRRC2CQ9Y520 2896 aaKnown RBP2.29□□□□□ -2.04
CD55-208ENST00000476590 ABCA12Q86UK0 2595 aa2.29□□□□□ -2.04
CD55-208ENST00000476590 COL12A1Q99715 3063 aa2.29□□□□□ -2.04
CD55-208ENST00000476590 A0A096LNI7 61 aa2.29□□□□□ -2.04
CD55-208ENST00000476590 SMG1Q96Q15 3661 aaKnown RBP2.29□□□□□ -2.04
CD55-208ENST00000476590 ITPR3Q14573 2671 aa2.29□□□□□ -2.04
CD55-208ENST00000476590 TTC28Q96AY4 2481 aa2.28□□□□□ -2.04
CD55-208ENST00000476590 CELSR2Q9HCU4 2923 aa2.28□□□□□ -2.04
CD55-208ENST00000476590 FLG2Q5D862 2391 aaPredicted RBP2.28□□□□□ -2.04
CD55-208ENST00000476590 SPINK1P00995 79 aa2.28□□□□□ -2.04
CD55-208ENST00000476590 VWFP04275 2813 aa2.28□□□□□ -2.04
CD55-208ENST00000476590 C10orf95Q9H7T3 257 aa2.27□□□□□ -2.05
CD55-208ENST00000476590 SPG11Q96JI7 2443 aa2.27□□□□□ -2.05
CD55-208ENST00000476590 CCDC168Q8NDH2 2452 aa2.27□□□□□ -2.05
CD55-208ENST00000476590 CELSR3Q9NYQ7 3312 aa2.27□□□□□ -2.05
CD55-208ENST00000476590 NOTCH1P46531 2555 aa2.27□□□□□ -2.05
CD55-208ENST00000476590 MYO15AQ9UKN7 3530 aa2.27□□□□□ -2.05
CD55-208ENST00000476590 GCN1Q92616 2671 aaKnown RBP2.26□□□□□ -2.05
CD55-208ENST00000476590 KRTAP24-1Q3LI83 254 aa2.26□□□□□ -2.05
CD55-208ENST00000476590 RPL37P61927 97 aaKnown RBP2.26□□□□□ -2.05
CD55-208ENST00000476590 COX6B2Q6YFQ2 88 aa2.26□□□□□ -2.05
CD55-208ENST00000476590 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
CD55-208ENST00000476590 NCOR2Q9Y618 2525 aa2.26□□□□□ -2.05
CD55-208ENST00000476590 FAM208BQ5VWN6 2430 aa2.25□□□□□ -2.05
CD55-208ENST00000476590 HTN3P15516 51 aa2.25□□□□□ -2.05
CD55-208ENST00000476590 CREBBPQ92793 2442 aa2.24□□□□□ -2.05
CD55-208ENST00000476590 DMXL1Q9Y485 3027 aa2.24□□□□□ -2.05
CD55-208ENST00000476590 ATMQ13315 3056 aa2.24□□□□□ -2.05
CD55-208ENST00000476590 MUC2Q02817 5179 aa2.24□□□□□ -2.05
CD55-208ENST00000476590 CEP290O15078 2479 aa2.24□□□□□ -2.05
CD55-208ENST00000476590 SPART-AS1P0CW21 52 aa2.23□□□□□ -2.05
CD55-208ENST00000476590 C14orf177Q52M58 125 aa2.23□□□□□ -2.05
CD55-208ENST00000476590 LRBAP50851 2863 aa2.23□□□□□ -2.05
CD55-208ENST00000476590 LAMA5O15230 3695 aa2.23□□□□□ -2.05
CD55-208ENST00000476590 DCHS2Q6V1P9 2916 aa2.23□□□□□ -2.05
CD55-208ENST00000476590 LINC01556Q5JQF7 62 aa2.23□□□□□ -2.05
CD55-208ENST00000476590 ANKHD1Q8IWZ3 2542 aaKnown RBP2.23□□□□□ -2.05
CD55-208ENST00000476590 H3BNG1 76 aa2.22□□□□□ -2.05
CD55-208ENST00000476590 DEFB4AO15263 64 aa2.22□□□□□ -2.05
CD55-208ENST00000476590 AKAP9Q99996 3911 aa2.22□□□□□ -2.05
CD55-208ENST00000476590 CELSR1Q9NYQ6 3014 aa2.22□□□□□ -2.05
CD55-208ENST00000476590 SPINK6Q6UWN8 80 aa2.22□□□□□ -2.05
CD55-208ENST00000476590 SPTAN1Q13813 2472 aaKnown RBP2.21□□□□□ -2.06
CD55-208ENST00000476590 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
CD55-208ENST00000476590 ASPMQ8IZT6 3477 aa2.21□□□□□ -2.06
CD55-208ENST00000476590 PLAC4Q8WY50 150 aa2.21□□□□□ -2.06
CD55-208ENST00000476590 PRO2289Q9P1D8 64 aa2.21□□□□□ -2.06
CD55-208ENST00000476590 RIF1Q5UIP0 2472 aaKnown RBP2.2□□□□□ -2.06
CD55-208ENST00000476590 UBR5O95071 2799 aaPredicted RBP2.2□□□□□ -2.06
CD55-208ENST00000476590 NF1P21359 2839 aa2.2□□□□□ -2.06
CD55-208ENST00000476590 CRYBG3Q68DQ2 2970 aa2.2□□□□□ -2.06
CD55-208ENST00000476590 DEFB135Q30KP9 77 aa2.19□□□□□ -2.06
CD55-208ENST00000476590 KRTAP13-1Q8IUC0 172 aa2.19□□□□□ -2.06
CD55-208ENST00000476590 APCP25054 2843 aa2.19□□□□□ -2.06
CD55-208ENST00000476590 NBASA2RRP1 2371 aa2.19□□□□□ -2.06
CD55-208ENST00000476590 KRTAP10-5P60370 271 aa2.19□□□□□ -2.06
CD55-208ENST00000476590 HRNRQ86YZ3 2850 aaPredicted RBP2.18□□□□□ -2.06
CD55-208ENST00000476590 RELNP78509 3460 aa2.18□□□□□ -2.06
CD55-208ENST00000476590 CSPG4Q6UVK1 2322 aa2.18□□□□□ -2.06
CD55-208ENST00000476590 TEX15Q9BXT5 2789 aa2.17□□□□□ -2.06
CD55-208ENST00000476590 TLN1Q9Y490 2541 aaKnown RBP2.16□□□□□ -2.06
CD55-208ENST00000476590 R4GN34 69 aa2.16□□□□□ -2.06
CD55-208ENST00000476590 ACACBO00763 2458 aa2.16□□□□□ -2.06
CD55-208ENST00000476590 RYR3Q15413 4870 aa2.16□□□□□ -2.06
CD55-208ENST00000476590 F8P00451 2351 aa2.16□□□□□ -2.06
CD55-208ENST00000476590 ADGRG4Q8IZF6 3080 aa2.16□□□□□ -2.06
CD55-208ENST00000476590 BIRC6Q9NR09 4857 aa2.16□□□□□ -2.06
CD55-208ENST00000476590 SPACA4Q8TDM5 124 aa2.15□□□□□ -2.07
CD55-208ENST00000476590 APLNQ9ULZ1 77 aa2.15□□□□□ -2.07
CD55-208ENST00000476590 S4R3F8 94 aa2.15□□□□□ -2.07
CD55-208ENST00000476590 ZNF292O60281 2723 aa2.14□□□□□ -2.07
CD55-208ENST00000476590 NBPF19A0A087WUL8 3843 aa2.14□□□□□ -2.07
CD55-208ENST00000476590 Q6ZRN7 208 aaPredicted RBP2.14□□□□□ -2.07
CD55-208ENST00000476590 DEFB124Q8NES8 71 aa2.14□□□□□ -2.07
CD55-208ENST00000476590 HIVEP2P31629 2446 aa2.14□□□□□ -2.07
CD55-208ENST00000476590 TLN2Q9Y4G6 2542 aa2.13□□□□□ -2.07
CD55-208ENST00000476590 A0A0D9SG42 100 aa2.13□□□□□ -2.07
CD55-208ENST00000476590 J3QKU1 62 aa2.13□□□□□ -2.07
CD55-208ENST00000476590 FN1P02751 2386 aaKnown RBP2.13□□□□□ -2.07
CD55-208ENST00000476590 SVEP1Q4LDE5 3571 aa2.12□□□□□ -2.07
CD55-208ENST00000476590 FBN1P35555 2871 aaKnown RBP2.12□□□□□ -2.07
CD55-208ENST00000476590 UBE2DNLQ8IWF7 75 aa2.12□□□□□ -2.07
CD55-208ENST00000476590 EYSQ5T1H1 3165 aa2.11□□□□□ -2.07
CD55-208ENST00000476590 RYR1P21817 5038 aa2.11□□□□□ -2.07
CD55-208ENST00000476590 HIVEP3Q5T1R4 2406 aa2.11□□□□□ -2.07
CD55-208ENST00000476590 KRTAP13-4Q3LI77 160 aa2.1□□□□□ -2.07
CD55-208ENST00000476590 IGSF10Q6WRI0 2623 aa2.1□□□□□ -2.07
CD55-208ENST00000476590 UTP20O75691 2785 aaKnown RBP2.1□□□□□ -2.07
CD55-208ENST00000476590 KRTAP10-12P60413 245 aa2.1□□□□□ -2.07
CD55-208ENST00000476590 SONP18583 2426 aaKnown RBP2.1□□□□□ -2.07
CD55-208ENST00000476590 TENM4Q6N022 2769 aa2.1□□□□□ -2.07
CD55-208ENST00000476590 NEBP20929 6669 aa2.09□□□□□ -2.07
CD55-208ENST00000476590 INE1O15225 51 aa2.09□□□□□ -2.07
CD55-208ENST00000476590 CRCT1Q9UGL9 99 aa2.09□□□□□ -2.07
CD55-208ENST00000476590 SRRM2Q9UQ35 2752 aaKnown RBP2.08□□□□□ -2.08
CD55-208ENST00000476590 KRTAP12-2P59991 146 aa2.08□□□□□ -2.08
CD55-208ENST00000476590 MAPK1IP1LQ8NDC0 245 aa2.08□□□□□ -2.08
CD55-208ENST00000476590 NBEAL2Q6ZNJ1 2754 aa2.07□□□□□ -2.08
CD55-208ENST00000476590 ZFYVE26Q68DK2 2539 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms