RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 SCGB1C2P0DMR2 95 aa8.03□□□□□ -1.12
APOBEC3F-203ENST00000476513 PSMB2P49721 201 aa8.03□□□□□ -1.12
APOBEC3F-203ENST00000476513 SS18L2Q9UHA2 77 aa8.03□□□□□ -1.12
APOBEC3F-203ENST00000476513 COX6CP09669 75 aa8.01□□□□□ -1.13
APOBEC3F-203ENST00000476513 ATXN8Q156A1 80 aa8□□□□□ -1.13
APOBEC3F-203ENST00000476513 TRIAP1O43715 76 aa7.99□□□□□ -1.13
APOBEC3F-203ENST00000476513 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.99□□□□□ -1.13
APOBEC3F-203ENST00000476513 NOTCH2NLQ7Z3S9 236 aa7.99□□□□□ -1.13
APOBEC3F-203ENST00000476513 PPDPFLQ8WWR9 84 aa7.98□□□□□ -1.13
APOBEC3F-203ENST00000476513 SMCPP49901 116 aaPredicted RBP7.97□□□□□ -1.13
APOBEC3F-203ENST00000476513 J3QR89 54 aa7.96□□□□□ -1.14
APOBEC3F-203ENST00000476513 ETDBQ3ZM63 59 aa7.95□□□□□ -1.14
APOBEC3F-203ENST00000476513 A0A087WSZ3 146 aa7.94□□□□□ -1.14
APOBEC3F-203ENST00000476513 TEN1Q86WV5 123 aa7.94□□□□□ -1.14
APOBEC3F-203ENST00000476513 LINC00313P59037 77 aa7.93□□□□□ -1.14
APOBEC3F-203ENST00000476513 SIGMAR1Q99720 223 aa7.92□□□□□ -1.14
APOBEC3F-203ENST00000476513 C9JAW5 83 aa7.91□□□□□ -1.14
APOBEC3F-203ENST00000476513 H3BT86 120 aa7.91□□□□□ -1.14
APOBEC3F-203ENST00000476513 MTURNQ8N3F0 131 aa7.91□□□□□ -1.14
APOBEC3F-203ENST00000476513 ANKRD29Q8N6D5 301 aa7.91□□□□□ -1.14
APOBEC3F-203ENST00000476513 TRACP01848 142 aa7.89□□□□□ -1.15
APOBEC3F-203ENST00000476513 Q8N9P0 234 aaPredicted RBP7.89□□□□□ -1.15
APOBEC3F-203ENST00000476513 VPS25Q9BRG1 176 aa7.89□□□□□ -1.15
APOBEC3F-203ENST00000476513 A8MWP4 228 aa7.87□□□□□ -1.15
APOBEC3F-203ENST00000476513 H0YGX0 51 aa7.87□□□□□ -1.15
APOBEC3F-203ENST00000476513 MUC12Q9UKN1 5478 aa7.85□□□□□ -1.15
APOBEC3F-203ENST00000476513 IGKV4-1P06312 121 aa7.83□□□□□ -1.16
APOBEC3F-203ENST00000476513 NDUFV3P56181 108 aaKnown RBP7.83□□□□□ -1.16
APOBEC3F-203ENST00000476513 KRTAP20-1Q3LI63 56 aa7.83□□□□□ -1.16
APOBEC3F-203ENST00000476513 A0A1B0GX51 115 aa7.82□□□□□ -1.16
APOBEC3F-203ENST00000476513 FAM218AQ96MZ4 157 aa7.8□□□□□ -1.16
APOBEC3F-203ENST00000476513 A0A1W2PNM2 257 aa7.79□□□□□ -1.16
APOBEC3F-203ENST00000476513 BAALC-AS2P0C853 105 aa7.77□□□□□ -1.17
APOBEC3F-203ENST00000476513 SPINK7P58062 85 aa7.77□□□□□ -1.17
APOBEC3F-203ENST00000476513 DNAL4O96015 105 aa7.76□□□□□ -1.17
APOBEC3F-203ENST00000476513 IGHV6-1A0A0B4J1U7 121 aa7.75□□□□□ -1.17
APOBEC3F-203ENST00000476513 DEFB116Q30KQ4 102 aa7.75□□□□□ -1.17
APOBEC3F-203ENST00000476513 FAM240AA0A1B0GVK7 77 aa7.74□□□□□ -1.17
APOBEC3F-203ENST00000476513 SNCGO76070 127 aa7.73□□□□□ -1.17
APOBEC3F-203ENST00000476513 ZCCHC13Q8WW36 166 aaKnown RBP7.73□□□□□ -1.17
APOBEC3F-203ENST00000476513 SCGB1A1P11684 91 aa7.72□□□□□ -1.17
APOBEC3F-203ENST00000476513 ACYP1P07311 99 aa7.71□□□□□ -1.18
APOBEC3F-203ENST00000476513 LINC00472Q9H8W2 130 aa7.71□□□□□ -1.18
APOBEC3F-203ENST00000476513 ORMDL1Q9P0S3 153 aa7.71□□□□□ -1.18
APOBEC3F-203ENST00000476513 TRBV7-4A0A0J9YYF1 115 aa7.69□□□□□ -1.18
APOBEC3F-203ENST00000476513 H3BQ85 93 aa7.69□□□□□ -1.18
APOBEC3F-203ENST00000476513 WFDC13Q8IUB5 93 aa7.69□□□□□ -1.18
APOBEC3F-203ENST00000476513 PCP4P48539 62 aa7.68□□□□□ -1.18
APOBEC3F-203ENST00000476513 C8orf87E5RJ46 101 aa7.66□□□□□ -1.18
APOBEC3F-203ENST00000476513 TMEM256-PLSCR3K7ERE1 68 aa7.66□□□□□ -1.18
APOBEC3F-203ENST00000476513 A0A1B0GVX0 72 aa7.64□□□□□ -1.19
APOBEC3F-203ENST00000476513 A6NN06 94 aa7.64□□□□□ -1.19
APOBEC3F-203ENST00000476513 JMJD7-PLA2G4BH0Y9G9 81 aa7.64□□□□□ -1.19
APOBEC3F-203ENST00000476513 GHRHP01286 108 aa7.64□□□□□ -1.19
APOBEC3F-203ENST00000476513 MT-ATP8P03928 68 aa7.63□□□□□ -1.19
APOBEC3F-203ENST00000476513 A0A1B0GV72 72 aa7.61□□□□□ -1.19
APOBEC3F-203ENST00000476513 C14orf132Q9NPU4 83 aa7.58□□□□□ -1.2
APOBEC3F-203ENST00000476513 CCKP06307 115 aa7.57□□□□□ -1.2
APOBEC3F-203ENST00000476513 KRTAP5-9P26371 169 aa7.57□□□□□ -1.2
APOBEC3F-203ENST00000476513 C21orf62-AS1Q17RA5 79 aa7.57□□□□□ -1.2
APOBEC3F-203ENST00000476513 LINC00643Q86TS7 51 aa7.57□□□□□ -1.2
APOBEC3F-203ENST00000476513 KMT2DO14686 5537 aa7.55□□□□□ -1.2
APOBEC3F-203ENST00000476513 PDE6GP18545 87 aa7.55□□□□□ -1.2
APOBEC3F-203ENST00000476513 H1FX-AS1Q4G0G2 97 aa7.55□□□□□ -1.2
APOBEC3F-203ENST00000476513 IMUPQ9GZP8 106 aa7.55□□□□□ -1.2
APOBEC3F-203ENST00000476513 MDN1Q9NU22 5596 aa7.54□□□□□ -1.2
APOBEC3F-203ENST00000476513 LOC110117498A0A087WWA1 95 aa7.54□□□□□ -1.2
APOBEC3F-203ENST00000476513 RBM3P98179 157 aaKnown RBP7.53□□□□□ -1.2
APOBEC3F-203ENST00000476513 MT1BP07438 61 aa7.52□□□□□ -1.21
APOBEC3F-203ENST00000476513 Q6ZQT0 140 aa7.5□□□□□ -1.21
APOBEC3F-203ENST00000476513 KRTAP2-3P0C7H8 128 aa7.48□□□□□ -1.21
APOBEC3F-203ENST00000476513 DSCR8Q96T75 97 aa7.48□□□□□ -1.21
APOBEC3F-203ENST00000476513 KRTAP2-4Q9BYR9 128 aa7.48□□□□□ -1.21
APOBEC3F-203ENST00000476513 J3KT08 172 aa7.46□□□□□ -1.22
APOBEC3F-203ENST00000476513 KRTAP10-5P60370 271 aa7.45□□□□□ -1.22
APOBEC3F-203ENST00000476513 ATP5EP2Q5VTU8 51 aa7.45□□□□□ -1.22
APOBEC3F-203ENST00000476513 Q5VV11 94 aa7.45□□□□□ -1.22
APOBEC3F-203ENST00000476513 IGKV3D-7A0A0C4DH55 119 aa7.44□□□□□ -1.22
APOBEC3F-203ENST00000476513 C8orf17Q9NRJ1 99 aa7.43□□□□□ -1.22
APOBEC3F-203ENST00000476513 NDUFB1O75438 58 aa7.42□□□□□ -1.22
APOBEC3F-203ENST00000476513 UBL5Q9BZL1 73 aa7.42□□□□□ -1.22
APOBEC3F-203ENST00000476513 KRTAP19-8Q3LI54 63 aa7.41□□□□□ -1.22
APOBEC3F-203ENST00000476513 A0A1B0GW54 56 aa7.4□□□□□ -1.22
APOBEC3F-203ENST00000476513 ANAPC13Q9BS18 74 aa7.4□□□□□ -1.22
APOBEC3F-203ENST00000476513 HIST1H4AP62805 103 aaKnown RBP7.37□□□□□ -1.23
APOBEC3F-203ENST00000476513 FAM236AA0A1B0GUQ0 79 aa7.36□□□□□ -1.23
APOBEC3F-203ENST00000476513 FAM236BA0A1B0GV22 79 aa7.36□□□□□ -1.23
APOBEC3F-203ENST00000476513 Q6ZVQ6 151 aa7.36□□□□□ -1.23
APOBEC3F-203ENST00000476513 SPRR2GQ9BYE4 73 aa7.36□□□□□ -1.23
APOBEC3F-203ENST00000476513 CXCL6P80162 114 aa7.34□□□□□ -1.23
APOBEC3F-203ENST00000476513 ATOX1O00244 68 aa7.31□□□□□ -1.24
APOBEC3F-203ENST00000476513 C5orf47Q569G3 176 aa7.29□□□□□ -1.24
APOBEC3F-203ENST00000476513 IGKV2D-30A0A075B6S6 120 aa7.27□□□□□ -1.25
APOBEC3F-203ENST00000476513 IGKV2-30P06310 120 aa7.27□□□□□ -1.25
APOBEC3F-203ENST00000476513 NREPQ16612 68 aa7.27□□□□□ -1.25
APOBEC3F-203ENST00000476513 A0A087WVE0 104 aa7.26□□□□□ -1.25
APOBEC3F-203ENST00000476513 MRPL34Q9BQ48 92 aaKnown RBP7.26□□□□□ -1.25
APOBEC3F-203ENST00000476513 SPRR2EP22531 72 aa7.25□□□□□ -1.25
APOBEC3F-203ENST00000476513 SPRR2BP35325 72 aa7.25□□□□□ -1.25
APOBEC3F-203ENST00000476513 SPRR2AP35326 72 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 261.6 ms