RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 CDK2AP2O75956 126 aa6.26□□□□□ -1.41
ABCF1-205ENST00000475993 IGLV9-49A0A0B4J1Y8 123 aa6.26□□□□□ -1.41
ABCF1-205ENST00000475993 KRTAP10-11P60412 298 aa6.26□□□□□ -1.41
ABCF1-205ENST00000475993 FLG2Q5D862 2391 aaPredicted RBP6.24□□□□□ -1.41
ABCF1-205ENST00000475993 ANK2Q01484 3957 aa6.23□□□□□ -1.41
ABCF1-205ENST00000475993 LINC00483Q53H64 154 aa6.22□□□□□ -1.41
ABCF1-205ENST00000475993 FBN1P35555 2871 aaKnown RBP6.22□□□□□ -1.41
ABCF1-205ENST00000475993 A8MUU9 505 aa6.2□□□□□ -1.42
ABCF1-205ENST00000475993 DNAH10Q8IVF4 4471 aa6.2□□□□□ -1.42
ABCF1-205ENST00000475993 IGLV5-52A0A0A0MRZ9 124 aa6.2□□□□□ -1.42
ABCF1-205ENST00000475993 KRTAP1-5Q9BYS1 174 aa6.2□□□□□ -1.42
ABCF1-205ENST00000475993 CRIPTQ9P021 101 aa6.18□□□□□ -1.42
ABCF1-205ENST00000475993 LYSTQ99698 3801 aa6.17□□□□□ -1.42
ABCF1-205ENST00000475993 WWC2-AS2Q96NR7 200 aa6.17□□□□□ -1.42
ABCF1-205ENST00000475993 C14orf177Q52M58 125 aa6.16□□□□□ -1.42
ABCF1-205ENST00000475993 COL7A1Q02388 2944 aa6.14□□□□□ -1.43
ABCF1-205ENST00000475993 PANO1I0J062 215 aa6.14□□□□□ -1.43
ABCF1-205ENST00000475993 NDUFAF8A1L188 74 aa6.12□□□□□ -1.43
ABCF1-205ENST00000475993 KRTAP16-1A8MUX0 517 aa6.12□□□□□ -1.43
ABCF1-205ENST00000475993 NOTCH1P46531 2555 aa6.12□□□□□ -1.43
ABCF1-205ENST00000475993 LINC00304Q8N9R0 145 aa6.12□□□□□ -1.43
ABCF1-205ENST00000475993 MAST4O15021 2626 aa6.12□□□□□ -1.43
ABCF1-205ENST00000475993 NSD1Q96L73 2696 aaPredicted RBP6.11□□□□□ -1.43
ABCF1-205ENST00000475993 IGLV7-43P04211 117 aa6.11□□□□□ -1.43
ABCF1-205ENST00000475993 SPINK6Q6UWN8 80 aa6.11□□□□□ -1.43
ABCF1-205ENST00000475993 STAB1Q9NY15 2570 aa6.1□□□□□ -1.43
ABCF1-205ENST00000475993 IGKV2-30P06310 120 aa6.1□□□□□ -1.43
ABCF1-205ENST00000475993 DNAH9Q9NYC9 4486 aa6.1□□□□□ -1.43
ABCF1-205ENST00000475993 FAM229AH3BQW9 127 aa6.09□□□□□ -1.43
ABCF1-205ENST00000475993 NBEAL1Q6ZS30 2694 aa6.09□□□□□ -1.43
ABCF1-205ENST00000475993 ANAPC11Q9NYG5 84 aa6.08□□□□□ -1.44
ABCF1-205ENST00000475993 SPINT4Q6UDR6 99 aa6.07□□□□□ -1.44
ABCF1-205ENST00000475993 SSBP3-AS1Q7Z2R9 100 aa6.06□□□□□ -1.44
ABCF1-205ENST00000475993 SPACA4Q8TDM5 124 aa6.06□□□□□ -1.44
ABCF1-205ENST00000475993 C20orf166-AS1Q96NR2 134 aa6.05□□□□□ -1.44
ABCF1-205ENST00000475993 KRTAP3-3Q9BYR6 98 aa6.05□□□□□ -1.44
ABCF1-205ENST00000475993 KRTAP3-2Q9BYR7 98 aa6.05□□□□□ -1.44
ABCF1-205ENST00000475993 DNAH3Q8TD57 4116 aa6.05□□□□□ -1.44
ABCF1-205ENST00000475993 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.05□□□□□ -1.44
ABCF1-205ENST00000475993 CMYA5Q8N3K9 4069 aa6.03□□□□□ -1.44
ABCF1-205ENST00000475993 PSORS1C2Q9UIG4 136 aa6.02□□□□□ -1.45
ABCF1-205ENST00000475993 COL6A5A8TX70 2615 aa6.01□□□□□ -1.45
ABCF1-205ENST00000475993 HUWE1Q7Z6Z7 4374 aaKnown RBP6.01□□□□□ -1.45
ABCF1-205ENST00000475993 UBE2DNLQ8IWF7 75 aa6□□□□□ -1.45
ABCF1-205ENST00000475993 DNAH8Q96JB1 4490 aa5.99□□□□□ -1.45
ABCF1-205ENST00000475993 FRAS1Q86XX4 4008 aa5.98□□□□□ -1.45
ABCF1-205ENST00000475993 IGKV2D-30A0A075B6S6 120 aa5.98□□□□□ -1.45
ABCF1-205ENST00000475993 CIRBP-AS1Q8TBR5 109 aa5.98□□□□□ -1.45
ABCF1-205ENST00000475993 H0YAA0 97 aa5.98□□□□□ -1.45
ABCF1-205ENST00000475993 SPINK1P00995 79 aa5.98□□□□□ -1.45
ABCF1-205ENST00000475993 Q6ZRN7 208 aaPredicted RBP5.97□□□□□ -1.45
ABCF1-205ENST00000475993 MGAM2Q2M2H8 2515 aa5.96□□□□□ -1.45
ABCF1-205ENST00000475993 LY6G6CO95867 125 aa5.96□□□□□ -1.46
ABCF1-205ENST00000475993 LCE2DQ5TA82 110 aaPredicted RBP5.96□□□□□ -1.46
ABCF1-205ENST00000475993 APLNQ9ULZ1 77 aa5.96□□□□□ -1.46
ABCF1-205ENST00000475993 A0A087WTM6 91 aa5.95□□□□□ -1.46
ABCF1-205ENST00000475993 NUPR2A6NF83 97 aa5.95□□□□□ -1.46
ABCF1-205ENST00000475993 KRTAP24-1Q3LI83 254 aa5.95□□□□□ -1.46
ABCF1-205ENST00000475993 Q6ZSA8 131 aa5.95□□□□□ -1.46
ABCF1-205ENST00000475993 NBDYA0A0U1RRE5 68 aa5.92□□□□□ -1.46
ABCF1-205ENST00000475993 DNAH7Q8WXX0 4024 aa5.91□□□□□ -1.46
ABCF1-205ENST00000475993 MEGF8Q7Z7M0 2845 aa5.9□□□□□ -1.46
ABCF1-205ENST00000475993 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
ABCF1-205ENST00000475993 LUZP6Q538Z0 58 aa5.88□□□□□ -1.47
ABCF1-205ENST00000475993 STAB2Q8WWQ8 2551 aa5.87□□□□□ -1.47
ABCF1-205ENST00000475993 DYNC2H1Q8NCM8 4307 aaKnown RBP5.85□□□□□ -1.47
ABCF1-205ENST00000475993 HECTD4Q9Y4D8 3996 aa5.85□□□□□ -1.47
ABCF1-205ENST00000475993 Q8N1X5 172 aa5.85□□□□□ -1.47
ABCF1-205ENST00000475993 A0A1B0GU33 70 aa5.84□□□□□ -1.47
ABCF1-205ENST00000475993 K7ERS5 55 aa5.84□□□□□ -1.47
ABCF1-205ENST00000475993 TYMSOSQ8TAI1 123 aa5.84□□□□□ -1.48
ABCF1-205ENST00000475993 DNAH17Q9UFH2 4485 aa5.83□□□□□ -1.48
ABCF1-205ENST00000475993 TPRXLQ17RH7 258 aa5.82□□□□□ -1.48
ABCF1-205ENST00000475993 TGP01266 2768 aa5.81□□□□□ -1.48
ABCF1-205ENST00000475993 H1FX-AS1Q4G0G2 97 aa5.8□□□□□ -1.48
ABCF1-205ENST00000475993 VPS13DQ5THJ4 4388 aa5.8□□□□□ -1.48
ABCF1-205ENST00000475993 KRTAP13-2Q52LG2 175 aa5.8□□□□□ -1.48
ABCF1-205ENST00000475993 PLECQ15149 4684 aaKnown RBP5.78□□□□□ -1.48
ABCF1-205ENST00000475993 DMBT1Q9UGM3 2413 aaPredicted RBP5.77□□□□□ -1.49
ABCF1-205ENST00000475993 C10orf95Q9H7T3 257 aa5.77□□□□□ -1.49
ABCF1-205ENST00000475993 KRTAP3-1Q9BYR8 98 aa5.7□□□□□ -1.5
ABCF1-205ENST00000475993 FBN3Q75N90 2809 aa5.69□□□□□ -1.5
ABCF1-205ENST00000475993 COX6B2Q6YFQ2 88 aa5.67□□□□□ -1.5
ABCF1-205ENST00000475993 KMT2AQ03164 3969 aa5.66□□□□□ -1.5
ABCF1-205ENST00000475993 KRTAP1-4P0C5Y4 121 aa5.65□□□□□ -1.5
ABCF1-205ENST00000475993 PRKDCP78527 4128 aaKnown RBP5.65□□□□□ -1.5
ABCF1-205ENST00000475993 DNAH2Q9P225 4427 aa5.65□□□□□ -1.51
ABCF1-205ENST00000475993 DNAH11Q96DT5 4516 aa5.65□□□□□ -1.51
ABCF1-205ENST00000475993 STARD9Q9P2P6 4700 aa5.62□□□□□ -1.51
ABCF1-205ENST00000475993 SEC61BP60468 96 aaKnown RBP5.6□□□□□ -1.51
ABCF1-205ENST00000475993 DNAH6Q9C0G6 4158 aa5.59□□□□□ -1.51
ABCF1-205ENST00000475993 RPL37P61927 97 aaKnown RBP5.59□□□□□ -1.51
ABCF1-205ENST00000475993 A0A0D9SG42 100 aa5.58□□□□□ -1.52
ABCF1-205ENST00000475993 DNAH5Q8TE73 4624 aa5.53□□□□□ -1.52
ABCF1-205ENST00000475993 LRP1BQ9NZR2 4599 aa5.53□□□□□ -1.52
ABCF1-205ENST00000475993 KRTAP10-2P60368 255 aa5.53□□□□□ -1.52
ABCF1-205ENST00000475993 RPS29P62273 56 aaKnown RBP5.53□□□□□ -1.52
ABCF1-205ENST00000475993 KRTAP10-6P60371 365 aaPredicted RBP5.52□□□□□ -1.53
ABCF1-205ENST00000475993 KRTAP13-4Q3LI77 160 aa5.52□□□□□ -1.53
ABCF1-205ENST00000475993 VPS13BQ7Z7G8 4022 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms