RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 H7C2G1 150 aa3.93□□□□□ -1.78
USP54-211ENST00000474929 COX6CP09669 75 aa3.93□□□□□ -1.78
USP54-211ENST00000474929 Q6ZRX8 168 aa3.93□□□□□ -1.78
USP54-211ENST00000474929 MUSTN1Q8IVN3 82 aa3.93□□□□□ -1.78
USP54-211ENST00000474929 SIGMAR1Q99720 223 aa3.93□□□□□ -1.78
USP54-211ENST00000474929 ZNF73O43830 326 aaPredicted RBP3.92□□□□□ -1.78
USP54-211ENST00000474929 SPRR2EP22531 72 aa3.92□□□□□ -1.78
USP54-211ENST00000474929 SPRR2BP35325 72 aa3.92□□□□□ -1.78
USP54-211ENST00000474929 SPRR2AP35326 72 aa3.92□□□□□ -1.78
USP54-211ENST00000474929 SMIM29Q86T20 159 aa3.92□□□□□ -1.78
USP54-211ENST00000474929 TEN1Q86WV5 123 aa3.92□□□□□ -1.78
USP54-211ENST00000474929 PPDPFLQ8WWR9 84 aa3.92□□□□□ -1.78
USP54-211ENST00000474929 Q9BRP9 147 aa3.91□□□□□ -1.78
USP54-211ENST00000474929 H3BT86 120 aa3.9□□□□□ -1.79
USP54-211ENST00000474929 K7ERJ3 54 aa3.9□□□□□ -1.79
USP54-211ENST00000474929 TCL1BO95988 128 aa3.9□□□□□ -1.79
USP54-211ENST00000474929 SCGB1C2P0DMR2 95 aa3.9□□□□□ -1.79
USP54-211ENST00000474929 ATXN8Q156A1 80 aa3.9□□□□□ -1.79
USP54-211ENST00000474929 Q1RN00 199 aa3.9□□□□□ -1.79
USP54-211ENST00000474929 Q8N9P0 234 aaPredicted RBP3.9□□□□□ -1.79
USP54-211ENST00000474929 ST20-AS1Q8NBB2 130 aa3.9□□□□□ -1.79
USP54-211ENST00000474929 LAMTOR3Q9UHA4 124 aa3.9□□□□□ -1.79
USP54-211ENST00000474929 FAM240AA0A1B0GVK7 77 aa3.89□□□□□ -1.79
USP54-211ENST00000474929 A4D1N5 150 aa3.89□□□□□ -1.79
USP54-211ENST00000474929 ETDBQ3ZM63 59 aa3.89□□□□□ -1.79
USP54-211ENST00000474929 A0A1B0GV72 72 aa3.88□□□□□ -1.79
USP54-211ENST00000474929 COX7BP24311 80 aa3.88□□□□□ -1.79
USP54-211ENST00000474929 DEFB105AQ8NG35 78 aa3.88□□□□□ -1.79
USP54-211ENST00000474929 NAA38Q9BRA0 125 aaKnown RBP3.88□□□□□ -1.79
USP54-211ENST00000474929 SPRR5A0A1B0GTR4 108 aa3.87□□□□□ -1.79
USP54-211ENST00000474929 ACYP1P07311 99 aa3.87□□□□□ -1.79
USP54-211ENST00000474929 SPRR1BP22528 89 aa3.87□□□□□ -1.79
USP54-211ENST00000474929 PSMB2P49721 201 aa3.87□□□□□ -1.79
USP54-211ENST00000474929 ANKRD29Q8N6D5 301 aa3.87□□□□□ -1.79
USP54-211ENST00000474929 TRAV13-2A0A0B4J235 113 aa3.86□□□□□ -1.79
USP54-211ENST00000474929 A0A0G2JQZ4 141 aa3.86□□□□□ -1.79
USP54-211ENST00000474929 OBSCN-AS1Q96MR7 158 aa3.86□□□□□ -1.79
USP54-211ENST00000474929 DHRS4-AS1Q9P1J3 65 aa3.86□□□□□ -1.79
USP54-211ENST00000474929 TRACP01848 142 aa3.85□□□□□ -1.79
USP54-211ENST00000474929 ELOF1P60002 83 aaKnown RBP3.85□□□□□ -1.79
USP54-211ENST00000474929 SMIM11BQ8TCY0 68 aa3.85□□□□□ -1.79
USP54-211ENST00000474929 LST1O00453 97 aa3.84□□□□□ -1.79
USP54-211ENST00000474929 IMUPQ9GZP8 106 aa3.84□□□□□ -1.79
USP54-211ENST00000474929 TRBV7-6A0A0J9YX20 115 aa3.83□□□□□ -1.8
USP54-211ENST00000474929 C9JAW5 83 aa3.83□□□□□ -1.8
USP54-211ENST00000474929 MPLKIPQ8TAP9 179 aa3.83□□□□□ -1.8
USP54-211ENST00000474929 A0A1B0GX51 115 aa3.82□□□□□ -1.8
USP54-211ENST00000474929 H0YGX0 51 aa3.82□□□□□ -1.8
USP54-211ENST00000474929 TRIAP1O43715 76 aa3.82□□□□□ -1.8
USP54-211ENST00000474929 SPRR2FQ96RM1 72 aa3.82□□□□□ -1.8
USP54-211ENST00000474929 TEX49A0A1B0GTD5 131 aa3.81□□□□□ -1.8
USP54-211ENST00000474929 H3BQ85 93 aa3.81□□□□□ -1.8
USP54-211ENST00000474929 SNCGO76070 127 aa3.8□□□□□ -1.8
USP54-211ENST00000474929 SPRR2DP22532 72 aa3.8□□□□□ -1.8
USP54-211ENST00000474929 IGFL1Q6UW32 110 aa3.8□□□□□ -1.8
USP54-211ENST00000474929 LINC00575Q6W349 94 aa3.8□□□□□ -1.8
USP54-211ENST00000474929 Q96NJ1 140 aa3.8□□□□□ -1.8
USP54-211ENST00000474929 hADV29S1A0JD25 119 aa3.79□□□□□ -1.8
USP54-211ENST00000474929 IGLV5-48A0A075B6I7 105 aa3.78□□□□□ -1.8
USP54-211ENST00000474929 TRBV7-7A0A0K0K1E9 115 aa3.78□□□□□ -1.8
USP54-211ENST00000474929 A8MUU9 505 aa3.78□□□□□ -1.8
USP54-211ENST00000474929 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
USP54-211ENST00000474929 HRES1P13985 223 aa3.77□□□□□ -1.81
USP54-211ENST00000474929 Q6ZQY7 126 aa3.77□□□□□ -1.81
USP54-211ENST00000474929 LINC00643Q86TS7 51 aa3.77□□□□□ -1.81
USP54-211ENST00000474929 F8WEM9 126 aa3.75□□□□□ -1.81
USP54-211ENST00000474929 DNAL4O96015 105 aa3.75□□□□□ -1.81
USP54-211ENST00000474929 MT-ATP8P03928 68 aa3.75□□□□□ -1.81
USP54-211ENST00000474929 BAALC-AS2P0C853 105 aa3.75□□□□□ -1.81
USP54-211ENST00000474929 LCE1AQ5T7P2 110 aa3.75□□□□□ -1.81
USP54-211ENST00000474929 Q5VV11 94 aa3.75□□□□□ -1.81
USP54-211ENST00000474929 JMJD7-PLA2G4BH0Y9G9 81 aa3.74□□□□□ -1.81
USP54-211ENST00000474929 NDUFV3P56181 108 aaKnown RBP3.74□□□□□ -1.81
USP54-211ENST00000474929 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.74□□□□□ -1.81
USP54-211ENST00000474929 ANAPC13Q9BS18 74 aa3.74□□□□□ -1.81
USP54-211ENST00000474929 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
USP54-211ENST00000474929 TMEM256-PLSCR3K7ERE1 68 aa3.73□□□□□ -1.81
USP54-211ENST00000474929 PDE6GP18545 87 aa3.73□□□□□ -1.81
USP54-211ENST00000474929 CLEC2BQ92478 149 aa3.73□□□□□ -1.81
USP54-211ENST00000474929 FAM218AQ96MZ4 157 aa3.73□□□□□ -1.81
USP54-211ENST00000474929 ATP5EP2Q5VTU8 51 aa3.72□□□□□ -1.81
USP54-211ENST00000474929 ORMDL1Q9P0S3 153 aa3.71□□□□□ -1.82
USP54-211ENST00000474929 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
USP54-211ENST00000474929 Q6JHZ5 121 aa3.7□□□□□ -1.82
USP54-211ENST00000474929 ATOX1O00244 68 aa3.69□□□□□ -1.82
USP54-211ENST00000474929 A0A1B0GW54 56 aa3.68□□□□□ -1.82
USP54-211ENST00000474929 UQCRQO14949 82 aa3.68□□□□□ -1.82
USP54-211ENST00000474929 CCKP06307 115 aa3.68□□□□□ -1.82
USP54-211ENST00000474929 MT1BP07438 61 aa3.68□□□□□ -1.82
USP54-211ENST00000474929 HIST1H4AP62805 103 aaKnown RBP3.68□□□□□ -1.82
USP54-211ENST00000474929 NOTCH2NLQ7Z3S9 236 aa3.68□□□□□ -1.82
USP54-211ENST00000474929 LOC110117498A0A087WWA1 95 aa3.66□□□□□ -1.82
USP54-211ENST00000474929 KRTAP19-4Q3LI73 84 aa3.66□□□□□ -1.82
USP54-211ENST00000474929 SMIM20Q8N5G0 67 aa3.65□□□□□ -1.83
USP54-211ENST00000474929 UBL5Q9BZL1 73 aa3.64□□□□□ -1.83
USP54-211ENST00000474929 SS18L2Q9UHA2 77 aa3.64□□□□□ -1.83
USP54-211ENST00000474929 A0A087WSZ3 146 aa3.63□□□□□ -1.83
USP54-211ENST00000474929 FAM236AA0A1B0GUQ0 79 aa3.63□□□□□ -1.83
USP54-211ENST00000474929 FAM236BA0A1B0GV22 79 aa3.63□□□□□ -1.83
USP54-211ENST00000474929 A0A1W2PNM2 257 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms