RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 COX6B2Q6YFQ2 88 aa8.14□□□□□ -1.11
VARS-223ENST00000474643 J3QR89 54 aa8.13□□□□□ -1.11
VARS-223ENST00000474643 RPL37P61927 97 aaKnown RBP8.13□□□□□ -1.11
VARS-223ENST00000474643 SIGMAR1Q99720 223 aa8.13□□□□□ -1.11
VARS-223ENST00000474643 LINC00472Q9H8W2 130 aa8.11□□□□□ -1.11
VARS-223ENST00000474643 FAM240AA0A1B0GVK7 77 aa8.1□□□□□ -1.11
VARS-223ENST00000474643 J3KT08 172 aa8.1□□□□□ -1.11
VARS-223ENST00000474643 M0R2T5 61 aa8.1□□□□□ -1.11
VARS-223ENST00000474643 ACYP1P07311 99 aa8.1□□□□□ -1.11
VARS-223ENST00000474643 Q96NJ1 140 aa8.1□□□□□ -1.11
VARS-223ENST00000474643 IGKV4-1P06312 121 aa8.09□□□□□ -1.11
VARS-223ENST00000474643 NREPQ16612 68 aa8.08□□□□□ -1.12
VARS-223ENST00000474643 DEFB116Q30KQ4 102 aa8.06□□□□□ -1.12
VARS-223ENST00000474643 LCE2CQ5TA81 110 aa8.06□□□□□ -1.12
VARS-223ENST00000474643 MT1HP80294 61 aa8.05□□□□□ -1.12
VARS-223ENST00000474643 LCE2DQ5TA82 110 aaPredicted RBP8.05□□□□□ -1.12
VARS-223ENST00000474643 UBL5Q9BZL1 73 aa8.05□□□□□ -1.12
VARS-223ENST00000474643 ATP11AUNQ6ZP68 121 aa8.04□□□□□ -1.12
VARS-223ENST00000474643 LINC00846Q9NV44 126 aa8.03□□□□□ -1.12
VARS-223ENST00000474643 DSCR10P59022 87 aa8.02□□□□□ -1.13
VARS-223ENST00000474643 KRTAP19-2Q3LHN2 52 aa8.02□□□□□ -1.13
VARS-223ENST00000474643 Q6ZVQ6 151 aa8.02□□□□□ -1.13
VARS-223ENST00000474643 LINC00313P59037 77 aa8□□□□□ -1.13
VARS-223ENST00000474643 Q75L30 129 aa7.99□□□□□ -1.13
VARS-223ENST00000474643 IGHV6-1A0A0B4J1U7 121 aa7.98□□□□□ -1.13
VARS-223ENST00000474643 NDUFB1O75438 58 aa7.98□□□□□ -1.13
VARS-223ENST00000474643 A8MWP4 228 aa7.97□□□□□ -1.13
VARS-223ENST00000474643 BPY2O14599 106 aa7.96□□□□□ -1.14
VARS-223ENST00000474643 C8orf87E5RJ46 101 aa7.95□□□□□ -1.14
VARS-223ENST00000474643 A0A1B0GVX0 72 aa7.94□□□□□ -1.14
VARS-223ENST00000474643 CXCL6P80162 114 aa7.94□□□□□ -1.14
VARS-223ENST00000474643 CRCT1Q9UGL9 99 aa7.94□□□□□ -1.14
VARS-223ENST00000474643 PRR15Q8IV56 129 aa7.93□□□□□ -1.14
VARS-223ENST00000474643 C20orf166-AS1Q96NR2 134 aa7.93□□□□□ -1.14
VARS-223ENST00000474643 KRTAP10-6P60371 365 aaPredicted RBP7.92□□□□□ -1.14
VARS-223ENST00000474643 ATP5EP2Q5VTU8 51 aa7.92□□□□□ -1.14
VARS-223ENST00000474643 A8MUU9 505 aa7.91□□□□□ -1.14
VARS-223ENST00000474643 IGKV3D-7A0A0C4DH55 119 aa7.9□□□□□ -1.14
VARS-223ENST00000474643 NOTCH2NLQ7Z3S9 236 aa7.9□□□□□ -1.14
VARS-223ENST00000474643 LINC00643Q86TS7 51 aa7.9□□□□□ -1.14
VARS-223ENST00000474643 SCGB1A1P11684 91 aa7.89□□□□□ -1.15
VARS-223ENST00000474643 LORP23490 312 aaPredicted RBP7.89□□□□□ -1.15
VARS-223ENST00000474643 FSIP2Q5CZC0 6907 aa7.87□□□□□ -1.15
VARS-223ENST00000474643 KRTAP16-1A8MUX0 517 aa7.86□□□□□ -1.15
VARS-223ENST00000474643 K7EQZ3 153 aa7.85□□□□□ -1.15
VARS-223ENST00000474643 C8orf17Q9NRJ1 99 aa7.85□□□□□ -1.15
VARS-223ENST00000474643 PCP4P48539 62 aa7.84□□□□□ -1.15
VARS-223ENST00000474643 FLGP20930 4061 aaPredicted RBP7.84□□□□□ -1.15
VARS-223ENST00000474643 MMP24-AS1A0A0U1RRL7 71 aa7.8□□□□□ -1.16
VARS-223ENST00000474643 TMEM254Q8TBM7 123 aa7.8□□□□□ -1.16
VARS-223ENST00000474643 FAM236DA0A1B0GTK5 79 aa7.79□□□□□ -1.16
VARS-223ENST00000474643 FAM236CP0DP71 79 aa7.79□□□□□ -1.16
VARS-223ENST00000474643 Q8N9P0 234 aaPredicted RBP7.79□□□□□ -1.16
VARS-223ENST00000474643 hDV103S1A0JD37 113 aa7.78□□□□□ -1.16
VARS-223ENST00000474643 Q8N9L7 120 aa7.77□□□□□ -1.17
VARS-223ENST00000474643 HCG22E2RYF7 251 aa7.75□□□□□ -1.17
VARS-223ENST00000474643 MRPL34Q9BQ48 92 aaKnown RBP7.75□□□□□ -1.17
VARS-223ENST00000474643 CASC2Q6XLA1 102 aa7.74□□□□□ -1.17
VARS-223ENST00000474643 IMUPQ9GZP8 106 aa7.74□□□□□ -1.17
VARS-223ENST00000474643 ZCCHC13Q8WW36 166 aaKnown RBP7.72□□□□□ -1.17
VARS-223ENST00000474643 NDUFS5O43920 106 aa7.7□□□□□ -1.18
VARS-223ENST00000474643 HIST1H4AP62805 103 aaKnown RBP7.7□□□□□ -1.18
VARS-223ENST00000474643 RBM12B-AS1Q9P1G2 102 aa7.7□□□□□ -1.18
VARS-223ENST00000474643 WFDC13Q8IUB5 93 aa7.67□□□□□ -1.18
VARS-223ENST00000474643 TP53AIP1Q9HCN2 124 aa7.67□□□□□ -1.18
VARS-223ENST00000474643 MT-ATP8P03928 68 aa7.64□□□□□ -1.19
VARS-223ENST00000474643 SPINK7P58062 85 aa7.61□□□□□ -1.19
VARS-223ENST00000474643 A0A087WVE0 104 aa7.6□□□□□ -1.19
VARS-223ENST00000474643 HRES1P13985 223 aa7.59□□□□□ -1.19
VARS-223ENST00000474643 UQCRQO14949 82 aa7.55□□□□□ -1.2
VARS-223ENST00000474643 KRTAP9-8Q9BYQ0 159 aa7.55□□□□□ -1.2
VARS-223ENST00000474643 MPLKIPQ8TAP9 179 aa7.52□□□□□ -1.21
VARS-223ENST00000474643 ANAPC13Q9BS18 74 aa7.52□□□□□ -1.21
VARS-223ENST00000474643 Q5W150 140 aa7.51□□□□□ -1.21
VARS-223ENST00000474643 IGKV2D-30A0A075B6S6 120 aa7.5□□□□□ -1.21
VARS-223ENST00000474643 IGKV2-30P06310 120 aa7.5□□□□□ -1.21
VARS-223ENST00000474643 SMIM20Q8N5G0 67 aa7.5□□□□□ -1.21
VARS-223ENST00000474643 OCR1Q9BZK8 76 aa7.5□□□□□ -1.21
VARS-223ENST00000474643 KRTAP10-10P60014 251 aa7.49□□□□□ -1.21
VARS-223ENST00000474643 TRAV22A0A0B4J277 110 aa7.48□□□□□ -1.21
VARS-223ENST00000474643 ATOX1O00244 68 aa7.48□□□□□ -1.21
VARS-223ENST00000474643 MT2AP02795 61 aa7.48□□□□□ -1.21
VARS-223ENST00000474643 C7orf65Q6ZTY9 151 aa7.47□□□□□ -1.21
VARS-223ENST00000474643 FAM236AA0A1B0GUQ0 79 aa7.46□□□□□ -1.22
VARS-223ENST00000474643 FAM236BA0A1B0GV22 79 aa7.46□□□□□ -1.22
VARS-223ENST00000474643 C5orf47Q569G3 176 aa7.45□□□□□ -1.22
VARS-223ENST00000474643 LOC101927531A0A1B0GV80 90 aa7.42□□□□□ -1.22
VARS-223ENST00000474643 H3BPC8 53 aa7.42□□□□□ -1.22
VARS-223ENST00000474643 MT1FP04733 61 aa7.41□□□□□ -1.22
VARS-223ENST00000474643 TRAV7A0A075B6U4 112 aa7.4□□□□□ -1.22
VARS-223ENST00000474643 MP68P56378 58 aa7.4□□□□□ -1.22
VARS-223ENST00000474643 USH2AO75445 5202 aa7.39□□□□□ -1.23
VARS-223ENST00000474643 H0Y9P7 68 aa7.39□□□□□ -1.23
VARS-223ENST00000474643 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.37□□□□□ -1.23
VARS-223ENST00000474643 CYP4F30PQ9H0H9 118 aa7.36□□□□□ -1.23
VARS-223ENST00000474643 KRTAP9-7A8MTY7 169 aa7.35□□□□□ -1.23
VARS-223ENST00000474643 C1orf64Q8NEQ6 169 aa7.34□□□□□ -1.23
VARS-223ENST00000474643 H1FX-AS1Q4G0G2 97 aa7.33□□□□□ -1.24
VARS-223ENST00000474643 SSPOA2VEC9 5147 aa7.32□□□□□ -1.24
VARS-223ENST00000474643 LCE2BO14633 110 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms