RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 ACYP2P14621 99 aa4.51□□□□□ -1.69
GPNMB-209ENST00000474157 DNAH9Q9NYC9 4486 aa4.5□□□□□ -1.69
GPNMB-209ENST00000474157 STAB2Q8WWQ8 2551 aa4.5□□□□□ -1.69
GPNMB-209ENST00000474157 DEFB1P60022 68 aa4.5□□□□□ -1.69
GPNMB-209ENST00000474157 CAMK2N2Q96S95 79 aa4.5□□□□□ -1.69
GPNMB-209ENST00000474157 KRTAP9-8Q9BYQ0 159 aa4.5□□□□□ -1.69
GPNMB-209ENST00000474157 IGKV3-7A0A075B6H7 116 aa4.49□□□□□ -1.69
GPNMB-209ENST00000474157 INSP01308 110 aa4.49□□□□□ -1.69
GPNMB-209ENST00000474157 LINC00483Q53H64 154 aa4.49□□□□□ -1.69
GPNMB-209ENST00000474157 RPL37AP8A6NKH3 93 aa4.48□□□□□ -1.69
GPNMB-209ENST00000474157 LY6EQ16553 131 aa4.48□□□□□ -1.69
GPNMB-209ENST00000474157 CHTF8P0CG12 524 aa4.47□□□□□ -1.69
GPNMB-209ENST00000474157 Q8N377 158 aa4.47□□□□□ -1.69
GPNMB-209ENST00000474157 C5orf56Q8N8D9 126 aa4.47□□□□□ -1.69
GPNMB-209ENST00000474157 G3V318 75 aa4.46□□□□□ -1.7
GPNMB-209ENST00000474157 NUPR2A6NF83 97 aa4.45□□□□□ -1.7
GPNMB-209ENST00000474157 DEFB131AP59861 70 aa4.45□□□□□ -1.7
GPNMB-209ENST00000474157 EGFEM1PQ0D2K5 195 aa4.45□□□□□ -1.7
GPNMB-209ENST00000474157 WFDC13Q8IUB5 93 aa4.45□□□□□ -1.7
GPNMB-209ENST00000474157 C20orf166-AS1Q96NR2 134 aa4.45□□□□□ -1.7
GPNMB-209ENST00000474157 DNAH3Q8TD57 4116 aa4.44□□□□□ -1.7
GPNMB-209ENST00000474157 TRGV1A0A0A0MS02 117 aa4.44□□□□□ -1.7
GPNMB-209ENST00000474157 H3BUX3 64 aa4.44□□□□□ -1.7
GPNMB-209ENST00000474157 WFDC10BQ8IUB3 73 aa4.44□□□□□ -1.7
GPNMB-209ENST00000474157 IGLV8-61A0A075B6I0 122 aa4.43□□□□□ -1.7
GPNMB-209ENST00000474157 ANGP03950 147 aaKnown RBP4.43□□□□□ -1.7
GPNMB-209ENST00000474157 P0C880 135 aa4.43□□□□□ -1.7
GPNMB-209ENST00000474157 KRTAP26-1Q6PEX3 210 aa4.43□□□□□ -1.7
GPNMB-209ENST00000474157 CMC4P56277 68 aaPredicted RBP4.42□□□□□ -1.7
GPNMB-209ENST00000474157 C7orf33Q8WU49 177 aa4.42□□□□□ -1.7
GPNMB-209ENST00000474157 IGKV2-24A0A0C4DH68 120 aa4.41□□□□□ -1.7
GPNMB-209ENST00000474157 HTN1P15515 57 aa4.41□□□□□ -1.7
GPNMB-209ENST00000474157 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
GPNMB-209ENST00000474157 C10orf99Q6UWK7 81 aa4.41□□□□□ -1.7
GPNMB-209ENST00000474157 CSNK1G2-AS1Q8NCQ2 148 aa4.41□□□□□ -1.7
GPNMB-209ENST00000474157 IGKV3OR2-268A0A0C4DH90 116 aa4.4□□□□□ -1.71
GPNMB-209ENST00000474157 A6NDX4 124 aa4.4□□□□□ -1.71
GPNMB-209ENST00000474157 IGLV7-43P04211 117 aa4.4□□□□□ -1.71
GPNMB-209ENST00000474157 MT3P25713 68 aa4.4□□□□□ -1.71
GPNMB-209ENST00000474157 C8orf17Q9NRJ1 99 aa4.4□□□□□ -1.71
GPNMB-209ENST00000474157 DNAH10OSP0CZ25 163 aa4.39□□□□□ -1.71
GPNMB-209ENST00000474157 Q5W150 140 aa4.39□□□□□ -1.71
GPNMB-209ENST00000474157 LYSTQ99698 3801 aa4.38□□□□□ -1.71
GPNMB-209ENST00000474157 A8MUU9 505 aa4.38□□□□□ -1.71
GPNMB-209ENST00000474157 C16orf74Q96GX8 76 aa4.38□□□□□ -1.71
GPNMB-209ENST00000474157 KIAA1109Q2LD37 5005 aa4.38□□□□□ -1.71
GPNMB-209ENST00000474157 C6orf48Q9UBA6 75 aa4.37□□□□□ -1.71
GPNMB-209ENST00000474157 SORL1Q92673 2214 aa4.37□□□□□ -1.71
GPNMB-209ENST00000474157 PCOTHQ58A44 107 aa4.36□□□□□ -1.71
GPNMB-209ENST00000474157 UNQ6190/PRO20217Q6UXQ8 127 aa4.36□□□□□ -1.71
GPNMB-209ENST00000474157 Q6ZRX8 168 aa4.36□□□□□ -1.71
GPNMB-209ENST00000474157 LINC00472Q9H8W2 130 aa4.36□□□□□ -1.71
GPNMB-209ENST00000474157 KRTAP4-16G5E9R7 235 aaPredicted RBP4.35□□□□□ -1.71
GPNMB-209ENST00000474157 KRTAP5-3Q6L8H2 238 aa4.35□□□□□ -1.71
GPNMB-209ENST00000474157 CSMD3Q7Z407 3707 aa4.35□□□□□ -1.71
GPNMB-209ENST00000474157 DNAH7Q8WXX0 4024 aa4.35□□□□□ -1.71
GPNMB-209ENST00000474157 SPRR1AP35321 89 aa4.34□□□□□ -1.71
GPNMB-209ENST00000474157 DEFB116Q30KQ4 102 aa4.34□□□□□ -1.71
GPNMB-209ENST00000474157 C14orf177Q52M58 125 aa4.34□□□□□ -1.71
GPNMB-209ENST00000474157 DEFB105AQ8NG35 78 aa4.34□□□□□ -1.71
GPNMB-209ENST00000474157 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.71
GPNMB-209ENST00000474157 FRAS1Q86XX4 4008 aa4.33□□□□□ -1.72
GPNMB-209ENST00000474157 MMP24-AS1A0A0U1RRL7 71 aa4.33□□□□□ -1.72
GPNMB-209ENST00000474157 LY6G6CO95867 125 aa4.33□□□□□ -1.72
GPNMB-209ENST00000474157 TLX1NBP0CAT3 122 aa4.33□□□□□ -1.72
GPNMB-209ENST00000474157 DEFB136Q30KP8 78 aa4.33□□□□□ -1.72
GPNMB-209ENST00000474157 CLPSL2Q6UWE3 100 aa4.33□□□□□ -1.72
GPNMB-209ENST00000474157 ANAPC11Q9NYG5 84 aa4.33□□□□□ -1.72
GPNMB-209ENST00000474157 HUWE1Q7Z6Z7 4374 aaKnown RBP4.33□□□□□ -1.72
GPNMB-209ENST00000474157 STARD9Q9P2P6 4700 aa4.33□□□□□ -1.72
GPNMB-209ENST00000474157 ABCA13Q86UQ4 5058 aa4.32□□□□□ -1.72
GPNMB-209ENST00000474157 NDUFAF8A1L188 74 aa4.32□□□□□ -1.72
GPNMB-209ENST00000474157 CAMK2N1Q7Z7J9 78 aa4.32□□□□□ -1.72
GPNMB-209ENST00000474157 UBR4Q5T4S7 5183 aa4.3□□□□□ -1.72
GPNMB-209ENST00000474157 SPINT4Q6UDR6 99 aa4.29□□□□□ -1.72
GPNMB-209ENST00000474157 IGFL1Q6UW32 110 aa4.29□□□□□ -1.72
GPNMB-209ENST00000474157 LINC00304Q8N9R0 145 aa4.29□□□□□ -1.72
GPNMB-209ENST00000474157 FAM168BA1KXE4 195 aa4.28□□□□□ -1.72
GPNMB-209ENST00000474157 KRTAP7-1Q8IUC3 87 aa4.28□□□□□ -1.72
GPNMB-209ENST00000474157 NOP10Q9NPE3 64 aaKnown RBP4.28□□□□□ -1.72
GPNMB-209ENST00000474157 HERC1Q15751 4861 aa4.28□□□□□ -1.72
GPNMB-209ENST00000474157 PRO0255Q9UI72 69 aa4.27□□□□□ -1.73
GPNMB-209ENST00000474157 PLECQ15149 4684 aaKnown RBP4.27□□□□□ -1.73
GPNMB-209ENST00000474157 KRTAP11-1Q8IUC1 163 aa4.26□□□□□ -1.73
GPNMB-209ENST00000474157 C4orf3Q8WVX3 66 aa4.26□□□□□ -1.73
GPNMB-209ENST00000474157 ALMS1Q8TCU4 4167 aa4.25□□□□□ -1.73
GPNMB-209ENST00000474157 A0A087WTM6 91 aa4.25□□□□□ -1.73
GPNMB-209ENST00000474157 MRPL34Q9BQ48 92 aaKnown RBP4.25□□□□□ -1.73
GPNMB-209ENST00000474157 HECTD4Q9Y4D8 3996 aa4.24□□□□□ -1.73
GPNMB-209ENST00000474157 SPRR1BP22528 89 aa4.24□□□□□ -1.73
GPNMB-209ENST00000474157 RPL37AP61513 92 aaKnown RBP4.24□□□□□ -1.73
GPNMB-209ENST00000474157 C15orf56Q8N910 161 aa4.22□□□□□ -1.73
GPNMB-209ENST00000474157 LELP1Q5T871 98 aa4.21□□□□□ -1.74
GPNMB-209ENST00000474157 DNAH10Q8IVF4 4471 aa4.2□□□□□ -1.74
GPNMB-209ENST00000474157 PANO1I0J062 215 aa4.2□□□□□ -1.74
GPNMB-209ENST00000474157 A0A1B0GVX0 72 aa4.18□□□□□ -1.74
GPNMB-209ENST00000474157 A0A1B0GVY2 172 aa4.18□□□□□ -1.74
GPNMB-209ENST00000474157 Q96NJ1 140 aa4.18□□□□□ -1.74
GPNMB-209ENST00000474157 KMT2AQ03164 3969 aa4.18□□□□□ -1.74
GPNMB-209ENST00000474157 CIRBP-AS1Q8TBR5 109 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms