RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 TSPEAR-AS2P59090 65 aa3.09□□□□□ -1.91
HDAC3-206ENST00000471968 EIF4EBP3O60516 100 aaPredicted RBP3.08□□□□□ -1.92
HDAC3-206ENST00000471968 LINC00483Q53H64 154 aa3.08□□□□□ -1.92
HDAC3-206ENST00000471968 IGLV5-37A0A075B6J1 123 aa3.07□□□□□ -1.92
HDAC3-206ENST00000471968 A0A0J9YXY3 114 aa3.07□□□□□ -1.92
HDAC3-206ENST00000471968 SMIM1B2RUZ4 78 aa3.07□□□□□ -1.92
HDAC3-206ENST00000471968 TIMM17BO60830 172 aa3.07□□□□□ -1.92
HDAC3-206ENST00000471968 ZNF22P17026 224 aaPredicted RBP3.07□□□□□ -1.92
HDAC3-206ENST00000471968 PFN2P35080 140 aa3.07□□□□□ -1.92
HDAC3-206ENST00000471968 HRCT1Q6UXD1 115 aa3.07□□□□□ -1.92
HDAC3-206ENST00000471968 FAM19A3Q7Z5A8 133 aa3.07□□□□□ -1.92
HDAC3-206ENST00000471968 MUSTN1Q8IVN3 82 aa3.07□□□□□ -1.92
HDAC3-206ENST00000471968 COPS9Q8WXC6 57 aa3.07□□□□□ -1.92
HDAC3-206ENST00000471968 A8MWP4 228 aa3.06□□□□□ -1.92
HDAC3-206ENST00000471968 NDUFC2O95298 119 aa3.06□□□□□ -1.92
HDAC3-206ENST00000471968 MT1BP07438 61 aa3.06□□□□□ -1.92
HDAC3-206ENST00000471968 LINC00158P58513 81 aa3.06□□□□□ -1.92
HDAC3-206ENST00000471968 KRTAP8-1Q8IUC2 63 aa3.06□□□□□ -1.92
HDAC3-206ENST00000471968 SERP2Q8N6R1 65 aa3.06□□□□□ -1.92
HDAC3-206ENST00000471968 FAM104AQ969W3 186 aa3.06□□□□□ -1.92
HDAC3-206ENST00000471968 IGLV5-45A0A087WSX0 123 aa3.05□□□□□ -1.92
HDAC3-206ENST00000471968 H7C2G1 150 aa3.05□□□□□ -1.92
HDAC3-206ENST00000471968 Q5XG85 94 aa3.05□□□□□ -1.92
HDAC3-206ENST00000471968 Q6JHZ5 121 aa3.05□□□□□ -1.92
HDAC3-206ENST00000471968 SMCR5Q8TEV8 140 aa3.05□□□□□ -1.92
HDAC3-206ENST00000471968 ZNF625Q96I27 306 aaPredicted RBP3.05□□□□□ -1.92
HDAC3-206ENST00000471968 LITAFQ99732 161 aa3.05□□□□□ -1.92
HDAC3-206ENST00000471968 PRO0628Q9UI54 55 aa3.05□□□□□ -1.92
HDAC3-206ENST00000471968 COX17Q14061 63 aa3.04□□□□□ -1.92
HDAC3-206ENST00000471968 ATP5EP2Q5VTU8 51 aa3.04□□□□□ -1.92
HDAC3-206ENST00000471968 A0A0U1RRA0 63 aa3.03□□□□□ -1.92
HDAC3-206ENST00000471968 hADV29S1A0JD25 119 aa3.03□□□□□ -1.92
HDAC3-206ENST00000471968 DNAL4O96015 105 aa3.03□□□□□ -1.92
HDAC3-206ENST00000471968 CLEC2BQ92478 149 aa3.03□□□□□ -1.92
HDAC3-206ENST00000471968 A0A0G2JQZ4 141 aa3.02□□□□□ -1.93
HDAC3-206ENST00000471968 IGLV5-39A0A0G2JS06 123 aa3.02□□□□□ -1.93
HDAC3-206ENST00000471968 MT4P47944 62 aa3.02□□□□□ -1.93
HDAC3-206ENST00000471968 NPC2P61916 151 aa3.02□□□□□ -1.93
HDAC3-206ENST00000471968 S100A7L2Q5SY68 101 aa3.02□□□□□ -1.93
HDAC3-206ENST00000471968 Q5VV11 94 aa3.02□□□□□ -1.93
HDAC3-206ENST00000471968 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
HDAC3-206ENST00000471968 Q75L30 129 aa3.02□□□□□ -1.93
HDAC3-206ENST00000471968 SND1-IT1Q9HBX3 110 aa3.02□□□□□ -1.93
HDAC3-206ENST00000471968 RBM12B-AS1Q9P1G2 102 aa3.02□□□□□ -1.93
HDAC3-206ENST00000471968 SERP1Q9Y6X1 66 aa3.02□□□□□ -1.93
HDAC3-206ENST00000471968 ATP5EP56381 51 aaPredicted RBP3.01□□□□□ -1.93
HDAC3-206ENST00000471968 C4orf26Q17RF5 130 aa3.01□□□□□ -1.93
HDAC3-206ENST00000471968 OBSCN-AS1Q96MR7 158 aa3.01□□□□□ -1.93
HDAC3-206ENST00000471968 DSCR8Q96T75 97 aa3.01□□□□□ -1.93
HDAC3-206ENST00000471968 TRBV10-3A0A0K0K1G6 114 aa3□□□□□ -1.93
HDAC3-206ENST00000471968 ETDCA0A1B0GVM5 59 aa3□□□□□ -1.93
HDAC3-206ENST00000471968 BAALC-AS2P0C853 105 aa3□□□□□ -1.93
HDAC3-206ENST00000471968 C1orf195Q5TG92 126 aa3□□□□□ -1.93
HDAC3-206ENST00000471968 MIR7-3HGQ8N6C7 128 aa3□□□□□ -1.93
HDAC3-206ENST00000471968 TRAV13-2A0A0B4J235 113 aa2.99□□□□□ -1.93
HDAC3-206ENST00000471968 NCR3O14931 201 aa2.99□□□□□ -1.93
HDAC3-206ENST00000471968 ADAMTSL4-AS1Q5T5F5 129 aa2.99□□□□□ -1.93
HDAC3-206ENST00000471968 LINC00308Q8TCZ7 52 aa2.99□□□□□ -1.93
HDAC3-206ENST00000471968 CYSTM1Q9H1C7 97 aa2.99□□□□□ -1.93
HDAC3-206ENST00000471968 SMIM26A0A096LP01 95 aa2.98□□□□□ -1.93
HDAC3-206ENST00000471968 NDUFC1O43677 76 aa2.98□□□□□ -1.93
HDAC3-206ENST00000471968 VPREB1P12018 145 aa2.98□□□□□ -1.93
HDAC3-206ENST00000471968 H0YGX0 51 aa2.97□□□□□ -1.93
HDAC3-206ENST00000471968 PRYO14603 147 aa2.97□□□□□ -1.93
HDAC3-206ENST00000471968 KLKP1Q107X0 134 aa2.97□□□□□ -1.93
HDAC3-206ENST00000471968 MPLKIPQ8TAP9 179 aa2.97□□□□□ -1.93
HDAC3-206ENST00000471968 V9GYY9 64 aa2.97□□□□□ -1.93
HDAC3-206ENST00000471968 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
HDAC3-206ENST00000471968 TRAV7A0A075B6U4 112 aa2.96□□□□□ -1.94
HDAC3-206ENST00000471968 IGKV3D-7A0A0C4DH55 119 aa2.95□□□□□ -1.94
HDAC3-206ENST00000471968 JMJD7-PLA2G4BH0Y9G9 81 aa2.95□□□□□ -1.94
HDAC3-206ENST00000471968 H7BZZ5 65 aa2.95□□□□□ -1.94
HDAC3-206ENST00000471968 ERC2-IT1O76042 136 aa2.95□□□□□ -1.94
HDAC3-206ENST00000471968 CCKP06307 115 aa2.95□□□□□ -1.94
HDAC3-206ENST00000471968 SEC61GP60059 68 aa2.95□□□□□ -1.94
HDAC3-206ENST00000471968 FAM218AQ96MZ4 157 aa2.95□□□□□ -1.94
HDAC3-206ENST00000471968 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
HDAC3-206ENST00000471968 TRAV23DV6A0A075B6W5 121 aa2.94□□□□□ -1.94
HDAC3-206ENST00000471968 A0A087WVE0 104 aa2.94□□□□□ -1.94
HDAC3-206ENST00000471968 HRES1P13985 223 aa2.94□□□□□ -1.94
HDAC3-206ENST00000471968 SMIM29Q86T20 159 aa2.94□□□□□ -1.94
HDAC3-206ENST00000471968 C20orf197Q8N268 126 aa2.94□□□□□ -1.94
HDAC3-206ENST00000471968 Q8NDZ9 215 aa2.94□□□□□ -1.94
HDAC3-206ENST00000471968 UBL5Q9BZL1 73 aa2.94□□□□□ -1.94
HDAC3-206ENST00000471968 C14orf132Q9NPU4 83 aa2.94□□□□□ -1.94
HDAC3-206ENST00000471968 LAMTOR3Q9UHA4 124 aa2.94□□□□□ -1.94
HDAC3-206ENST00000471968 SOSTDC1Q6X4U4 206 aa2.93□□□□□ -1.94
HDAC3-206ENST00000471968 ZCCHC13Q8WW36 166 aaKnown RBP2.93□□□□□ -1.94
HDAC3-206ENST00000471968 KCNQ1DNQ9H478 68 aa2.93□□□□□ -1.94
HDAC3-206ENST00000471968 ORMDL1Q9P0S3 153 aa2.93□□□□□ -1.94
HDAC3-206ENST00000471968 ZNF73O43830 326 aaPredicted RBP2.92□□□□□ -1.94
HDAC3-206ENST00000471968 H3BQ85 93 aa2.91□□□□□ -1.94
HDAC3-206ENST00000471968 TMEM256-PLSCR3K7ERE1 68 aa2.91□□□□□ -1.94
HDAC3-206ENST00000471968 CXCL6P80162 114 aa2.91□□□□□ -1.94
HDAC3-206ENST00000471968 KRTAP19-8Q3LI54 63 aa2.91□□□□□ -1.94
HDAC3-206ENST00000471968 SMIM11BQ8TCY0 68 aa2.91□□□□□ -1.94
HDAC3-206ENST00000471968 DHRS4-AS1Q9P1J3 65 aa2.91□□□□□ -1.94
HDAC3-206ENST00000471968 LOC110117498A0A087WWA1 95 aa2.9□□□□□ -1.95
HDAC3-206ENST00000471968 TRBV7-6A0A0J9YX20 115 aa2.9□□□□□ -1.95
HDAC3-206ENST00000471968 F8WEM9 126 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms